BLASTX nr result

ID: Glycyrrhiza24_contig00021074 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00021074
         (558 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545653.1| PREDICTED: probable RNA-binding protein 19-l...   241   6e-62
ref|XP_003543978.1| PREDICTED: LOW QUALITY PROTEIN: multiple RNA...   239   2e-61
ref|XP_002275485.2| PREDICTED: probable RNA-binding protein 19-l...   207   9e-52
ref|XP_004162358.1| PREDICTED: multiple RNA-binding domain-conta...   187   1e-45
ref|XP_004149761.1| PREDICTED: LOW QUALITY PROTEIN: multiple RNA...   187   1e-45

>ref|XP_003545653.1| PREDICTED: probable RNA-binding protein 19-like [Glycine max]
          Length = 824

 Score =  241 bits (615), Expect = 6e-62
 Identities = 130/189 (68%), Positives = 149/189 (78%), Gaps = 4/189 (2%)
 Frame = +2

Query: 2   NIPKYVVEDRLRELFSQKGEI-TDVKLMRTKDGKSRQFAFIGFRSDHEAQEAIRYFNRSY 178
           N+PK V ED LRE FS KG I TDVKLMRTKDGKSRQFAFIG+R++ EAQEAIRYFN+++
Sbjct: 24  NLPKDVGEDELREFFSGKGGIITDVKLMRTKDGKSRQFAFIGYRTEDEAQEAIRYFNKNF 83

Query: 179 LDTSRITCEVAQKLGDANLPRPWSRYSTKKDKKVTTPE-NKHDTAKGHGENSKDIV--DI 349
           L TSRI CEVA+K GDANLPRPWSR+S K+D KVT P+  K   AKG GENSK  V  D+
Sbjct: 84  LRTSRIICEVARKHGDANLPRPWSRHSKKEDDKVTAPDLEKPSRAKGQGENSKGGVGDDV 143

Query: 350 DDPQLQDFLQVMQPRVKSKLWANDTSIVSNVDNNQAILNKESKGTAVAIHPILGQSGSLV 529
           DDPQLQDFLQVMQPRVKSK+WANDTSIV+NV N QA+ NK++ G +VA      QSGS  
Sbjct: 144 DDPQLQDFLQVMQPRVKSKMWANDTSIVTNVGNKQAMPNKDNDGASVA----SDQSGSFE 199

Query: 530 DGFPNNPEP 556
           DGF  + EP
Sbjct: 200 DGFLEDSEP 208


>ref|XP_003543978.1| PREDICTED: LOW QUALITY PROTEIN: multiple RNA-binding
           domain-containing protein 1-like [Glycine max]
          Length = 847

 Score =  239 bits (611), Expect = 2e-61
 Identities = 129/190 (67%), Positives = 146/190 (76%), Gaps = 5/190 (2%)
 Frame = +2

Query: 2   NIPKYVVEDRLRELFSQKGEI-TDVKLMRTKDGKSRQFAFIGFRSDHEAQEAIRYFNRSY 178
           N+PK V ED LRE FS KG I TD KLMRTKDGKSRQFAFIG+R++ EAQEAIRYFN+++
Sbjct: 8   NLPKDVAEDELREFFSGKGGIITDAKLMRTKDGKSRQFAFIGYRTEDEAQEAIRYFNKNF 67

Query: 179 LDTSRITCEVAQKLGDANLPRPWSRYSTKKDKKVTTP--ENKHDTAKGHGENSKDIV--D 346
           L TSRI CEVA+K GD NLPRPWSR+S KKD KVT P  E      KG GENSK  V  D
Sbjct: 68  LRTSRIICEVARKHGDENLPRPWSRHSKKKDDKVTAPDVEKPARANKGQGENSKGSVGDD 127

Query: 347 IDDPQLQDFLQVMQPRVKSKLWANDTSIVSNVDNNQAILNKESKGTAVAIHPILGQSGSL 526
           +DDPQLQDFLQVMQPRVKSK+WANDTSI +NVDN QA+ NK++ G +VA      QSGSL
Sbjct: 128 VDDPQLQDFLQVMQPRVKSKMWANDTSIATNVDNRQAMPNKDNDGASVA----SDQSGSL 183

Query: 527 VDGFPNNPEP 556
            DGF  + EP
Sbjct: 184 EDGFLEDSEP 193


>ref|XP_002275485.2| PREDICTED: probable RNA-binding protein 19-like [Vitis vinifera]
          Length = 983

 Score =  207 bits (527), Expect = 9e-52
 Identities = 113/202 (55%), Positives = 138/202 (68%), Gaps = 20/202 (9%)
 Frame = +2

Query: 2   NIPKYVVEDRLRELFSQKGEITDVKLMRTKDGKSRQFAFIGFRSDHEAQEAIRYFNRSYL 181
           N+PKYV EDRLR+ FSQKGEITD KLMRTK+GKSRQFAFIGFR++ EA+EA+++FN SYL
Sbjct: 125 NLPKYVAEDRLRDHFSQKGEITDAKLMRTKEGKSRQFAFIGFRTEQEAEEALKFFNNSYL 184

Query: 182 DTSRITCEVAQKLGDANLPRPWSRYSTKKDKKVTTPENKHDTAK------GHGENSKDIV 343
           DT RITCE+A+K+GD ++PRPWSRYS KK+ K T  E K    K        GE SK   
Sbjct: 185 DTCRITCEIARKVGDPDIPRPWSRYSLKKEDKSTEVEKKDRGTKNSSHVGSKGEKSKKGS 244

Query: 344 DIDDPQLQDFLQVMQPRVKSKLWANDTSIVSNVDNN------QAILNKESKGTAVAIHPI 505
           + DDPQLQ+FLQVMQPRVKSK+WANDT  V  +D+N      Q    +E +  AV +   
Sbjct: 245 ENDDPQLQEFLQVMQPRVKSKMWANDTLGVPPLDHNGKNSDKQTQSMREGRDEAVQMQAD 304

Query: 506 LGQ--------SGSLVDGFPNN 547
           L +        S S +D  PNN
Sbjct: 305 LDESDEREDELSDSQMDTKPNN 326


>ref|XP_004162358.1| PREDICTED: multiple RNA-binding domain-containing protein 1-like
           [Cucumis sativus]
          Length = 826

 Score =  187 bits (474), Expect = 1e-45
 Identities = 93/165 (56%), Positives = 122/165 (73%), Gaps = 6/165 (3%)
 Frame = +2

Query: 2   NIPKYVVEDRLRELFSQKGEITDVKLMRTKDGKSRQFAFIGFRSDHEAQEAIRYFNRSYL 181
           N+PKY+ ++RLR LFS+KGEITDVKLMRTKDGKSRQFAFIGFR++HEAQEAIRYFN+S++
Sbjct: 12  NLPKYIDDNRLRTLFSEKGEITDVKLMRTKDGKSRQFAFIGFRTEHEAQEAIRYFNKSFI 71

Query: 182 DTSRITCEVAQKLGDANLPRPWSRYS-TKKDKK--VTTPENKHDTAKGHGENSKDI---V 343
           +T RI CE A K+GD  +PRPWS++S  KK  K  +   ++K+    G  E   D+   +
Sbjct: 72  NTHRIACESAWKVGDPKIPRPWSKHSKAKKGSKDGMEVEDDKNSNFLGSKEEGDDLKLSI 131

Query: 344 DIDDPQLQDFLQVMQPRVKSKLWANDTSIVSNVDNNQAILNKESK 478
             DDP++Q+FLQV QPR+ SKLWAND  + S+ D N+    K S+
Sbjct: 132 QDDDPKIQEFLQVTQPRINSKLWANDILVASDADQNRKGKEKPSQ 176


>ref|XP_004149761.1| PREDICTED: LOW QUALITY PROTEIN: multiple RNA-binding
           domain-containing protein 1-like [Cucumis sativus]
          Length = 823

 Score =  187 bits (474), Expect = 1e-45
 Identities = 93/165 (56%), Positives = 122/165 (73%), Gaps = 6/165 (3%)
 Frame = +2

Query: 2   NIPKYVVEDRLRELFSQKGEITDVKLMRTKDGKSRQFAFIGFRSDHEAQEAIRYFNRSYL 181
           N+PKY+ ++RLR LFS+KGEITDVKLMRTKDGKSRQFAFIGFR++HEAQEAIRYFN+S++
Sbjct: 12  NLPKYIDDNRLRTLFSEKGEITDVKLMRTKDGKSRQFAFIGFRTEHEAQEAIRYFNKSFI 71

Query: 182 DTSRITCEVAQKLGDANLPRPWSRYS-TKKDKK--VTTPENKHDTAKGHGENSKDI---V 343
           +T RI CE A K+GD  +PRPWS++S  KK  K  +   ++K+    G  E   D+   +
Sbjct: 72  NTHRIACESAWKVGDPKIPRPWSKHSKAKKGSKDGMEVEDDKNSNFLGSKEEGDDLKLSI 131

Query: 344 DIDDPQLQDFLQVMQPRVKSKLWANDTSIVSNVDNNQAILNKESK 478
             DDP++Q+FLQV QPR+ SKLWAND  + S+ D N+    K S+
Sbjct: 132 QDDDPKIQEFLQVTQPRINSKLWANDILVASDADQNRKGKEKPSQ 176


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