BLASTX nr result
ID: Glycyrrhiza24_contig00021074
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza24_contig00021074 (558 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003545653.1| PREDICTED: probable RNA-binding protein 19-l... 241 6e-62 ref|XP_003543978.1| PREDICTED: LOW QUALITY PROTEIN: multiple RNA... 239 2e-61 ref|XP_002275485.2| PREDICTED: probable RNA-binding protein 19-l... 207 9e-52 ref|XP_004162358.1| PREDICTED: multiple RNA-binding domain-conta... 187 1e-45 ref|XP_004149761.1| PREDICTED: LOW QUALITY PROTEIN: multiple RNA... 187 1e-45 >ref|XP_003545653.1| PREDICTED: probable RNA-binding protein 19-like [Glycine max] Length = 824 Score = 241 bits (615), Expect = 6e-62 Identities = 130/189 (68%), Positives = 149/189 (78%), Gaps = 4/189 (2%) Frame = +2 Query: 2 NIPKYVVEDRLRELFSQKGEI-TDVKLMRTKDGKSRQFAFIGFRSDHEAQEAIRYFNRSY 178 N+PK V ED LRE FS KG I TDVKLMRTKDGKSRQFAFIG+R++ EAQEAIRYFN+++ Sbjct: 24 NLPKDVGEDELREFFSGKGGIITDVKLMRTKDGKSRQFAFIGYRTEDEAQEAIRYFNKNF 83 Query: 179 LDTSRITCEVAQKLGDANLPRPWSRYSTKKDKKVTTPE-NKHDTAKGHGENSKDIV--DI 349 L TSRI CEVA+K GDANLPRPWSR+S K+D KVT P+ K AKG GENSK V D+ Sbjct: 84 LRTSRIICEVARKHGDANLPRPWSRHSKKEDDKVTAPDLEKPSRAKGQGENSKGGVGDDV 143 Query: 350 DDPQLQDFLQVMQPRVKSKLWANDTSIVSNVDNNQAILNKESKGTAVAIHPILGQSGSLV 529 DDPQLQDFLQVMQPRVKSK+WANDTSIV+NV N QA+ NK++ G +VA QSGS Sbjct: 144 DDPQLQDFLQVMQPRVKSKMWANDTSIVTNVGNKQAMPNKDNDGASVA----SDQSGSFE 199 Query: 530 DGFPNNPEP 556 DGF + EP Sbjct: 200 DGFLEDSEP 208 >ref|XP_003543978.1| PREDICTED: LOW QUALITY PROTEIN: multiple RNA-binding domain-containing protein 1-like [Glycine max] Length = 847 Score = 239 bits (611), Expect = 2e-61 Identities = 129/190 (67%), Positives = 146/190 (76%), Gaps = 5/190 (2%) Frame = +2 Query: 2 NIPKYVVEDRLRELFSQKGEI-TDVKLMRTKDGKSRQFAFIGFRSDHEAQEAIRYFNRSY 178 N+PK V ED LRE FS KG I TD KLMRTKDGKSRQFAFIG+R++ EAQEAIRYFN+++ Sbjct: 8 NLPKDVAEDELREFFSGKGGIITDAKLMRTKDGKSRQFAFIGYRTEDEAQEAIRYFNKNF 67 Query: 179 LDTSRITCEVAQKLGDANLPRPWSRYSTKKDKKVTTP--ENKHDTAKGHGENSKDIV--D 346 L TSRI CEVA+K GD NLPRPWSR+S KKD KVT P E KG GENSK V D Sbjct: 68 LRTSRIICEVARKHGDENLPRPWSRHSKKKDDKVTAPDVEKPARANKGQGENSKGSVGDD 127 Query: 347 IDDPQLQDFLQVMQPRVKSKLWANDTSIVSNVDNNQAILNKESKGTAVAIHPILGQSGSL 526 +DDPQLQDFLQVMQPRVKSK+WANDTSI +NVDN QA+ NK++ G +VA QSGSL Sbjct: 128 VDDPQLQDFLQVMQPRVKSKMWANDTSIATNVDNRQAMPNKDNDGASVA----SDQSGSL 183 Query: 527 VDGFPNNPEP 556 DGF + EP Sbjct: 184 EDGFLEDSEP 193 >ref|XP_002275485.2| PREDICTED: probable RNA-binding protein 19-like [Vitis vinifera] Length = 983 Score = 207 bits (527), Expect = 9e-52 Identities = 113/202 (55%), Positives = 138/202 (68%), Gaps = 20/202 (9%) Frame = +2 Query: 2 NIPKYVVEDRLRELFSQKGEITDVKLMRTKDGKSRQFAFIGFRSDHEAQEAIRYFNRSYL 181 N+PKYV EDRLR+ FSQKGEITD KLMRTK+GKSRQFAFIGFR++ EA+EA+++FN SYL Sbjct: 125 NLPKYVAEDRLRDHFSQKGEITDAKLMRTKEGKSRQFAFIGFRTEQEAEEALKFFNNSYL 184 Query: 182 DTSRITCEVAQKLGDANLPRPWSRYSTKKDKKVTTPENKHDTAK------GHGENSKDIV 343 DT RITCE+A+K+GD ++PRPWSRYS KK+ K T E K K GE SK Sbjct: 185 DTCRITCEIARKVGDPDIPRPWSRYSLKKEDKSTEVEKKDRGTKNSSHVGSKGEKSKKGS 244 Query: 344 DIDDPQLQDFLQVMQPRVKSKLWANDTSIVSNVDNN------QAILNKESKGTAVAIHPI 505 + DDPQLQ+FLQVMQPRVKSK+WANDT V +D+N Q +E + AV + Sbjct: 245 ENDDPQLQEFLQVMQPRVKSKMWANDTLGVPPLDHNGKNSDKQTQSMREGRDEAVQMQAD 304 Query: 506 LGQ--------SGSLVDGFPNN 547 L + S S +D PNN Sbjct: 305 LDESDEREDELSDSQMDTKPNN 326 >ref|XP_004162358.1| PREDICTED: multiple RNA-binding domain-containing protein 1-like [Cucumis sativus] Length = 826 Score = 187 bits (474), Expect = 1e-45 Identities = 93/165 (56%), Positives = 122/165 (73%), Gaps = 6/165 (3%) Frame = +2 Query: 2 NIPKYVVEDRLRELFSQKGEITDVKLMRTKDGKSRQFAFIGFRSDHEAQEAIRYFNRSYL 181 N+PKY+ ++RLR LFS+KGEITDVKLMRTKDGKSRQFAFIGFR++HEAQEAIRYFN+S++ Sbjct: 12 NLPKYIDDNRLRTLFSEKGEITDVKLMRTKDGKSRQFAFIGFRTEHEAQEAIRYFNKSFI 71 Query: 182 DTSRITCEVAQKLGDANLPRPWSRYS-TKKDKK--VTTPENKHDTAKGHGENSKDI---V 343 +T RI CE A K+GD +PRPWS++S KK K + ++K+ G E D+ + Sbjct: 72 NTHRIACESAWKVGDPKIPRPWSKHSKAKKGSKDGMEVEDDKNSNFLGSKEEGDDLKLSI 131 Query: 344 DIDDPQLQDFLQVMQPRVKSKLWANDTSIVSNVDNNQAILNKESK 478 DDP++Q+FLQV QPR+ SKLWAND + S+ D N+ K S+ Sbjct: 132 QDDDPKIQEFLQVTQPRINSKLWANDILVASDADQNRKGKEKPSQ 176 >ref|XP_004149761.1| PREDICTED: LOW QUALITY PROTEIN: multiple RNA-binding domain-containing protein 1-like [Cucumis sativus] Length = 823 Score = 187 bits (474), Expect = 1e-45 Identities = 93/165 (56%), Positives = 122/165 (73%), Gaps = 6/165 (3%) Frame = +2 Query: 2 NIPKYVVEDRLRELFSQKGEITDVKLMRTKDGKSRQFAFIGFRSDHEAQEAIRYFNRSYL 181 N+PKY+ ++RLR LFS+KGEITDVKLMRTKDGKSRQFAFIGFR++HEAQEAIRYFN+S++ Sbjct: 12 NLPKYIDDNRLRTLFSEKGEITDVKLMRTKDGKSRQFAFIGFRTEHEAQEAIRYFNKSFI 71 Query: 182 DTSRITCEVAQKLGDANLPRPWSRYS-TKKDKK--VTTPENKHDTAKGHGENSKDI---V 343 +T RI CE A K+GD +PRPWS++S KK K + ++K+ G E D+ + Sbjct: 72 NTHRIACESAWKVGDPKIPRPWSKHSKAKKGSKDGMEVEDDKNSNFLGSKEEGDDLKLSI 131 Query: 344 DIDDPQLQDFLQVMQPRVKSKLWANDTSIVSNVDNNQAILNKESK 478 DDP++Q+FLQV QPR+ SKLWAND + S+ D N+ K S+ Sbjct: 132 QDDDPKIQEFLQVTQPRINSKLWANDILVASDADQNRKGKEKPSQ 176