BLASTX nr result

ID: Glycyrrhiza24_contig00021071 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00021071
         (1196 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003524120.1| PREDICTED: uncharacterized protein LOC100793...   474   e-131
ref|XP_003631193.1| PREDICTED: uncharacterized protein LOC100247...   325   2e-86
emb|CBI27197.3| unnamed protein product [Vitis vinifera]              259   7e-67
ref|XP_002303505.1| chromatin remodeling complex subunit [Populu...   252   1e-64
ref|XP_002523656.1| chromodomain helicase DNA binding protein, p...   249   1e-63

>ref|XP_003524120.1| PREDICTED: uncharacterized protein LOC100793933 [Glycine max]
          Length = 2325

 Score =  474 bits (1219), Expect = e-131
 Identities = 254/397 (63%), Positives = 272/397 (68%)
 Frame = -2

Query: 1195 EQVKVFQGPAFPVQRXXXXXXXXXXSAHFPISDGMMERALHGSKFLLPPKFQNHLTDMKL 1016
            EQVKVFQGP FP QR           AHFPISDGMMERALHGSKFLLPPKFQNHLTDMKL
Sbjct: 1848 EQVKVFQGPPFPAQRSFKTTKSTKS-AHFPISDGMMERALHGSKFLLPPKFQNHLTDMKL 1906

Query: 1015 GIGDSASGLPHFRTMDRHGLQNDHFAPLPSWSYDMNRVKFSEDASAETSDRPGTSSNVLT 836
            GIGDSAS L HF T+DR  LQNDHF PLPSWSYD NR KF E A AET+DRPGTSS+VLT
Sbjct: 1907 GIGDSASSLSHFSTLDRPSLQNDHFIPLPSWSYDKNRSKFPEGAPAETTDRPGTSSSVLT 1966

Query: 835  ERPXXXXXXXXXXXXXXXXXXXXGIDIQKKEDDQGNTKRGKLPVLLDESPNDMRDNRANV 656
            ERP                     ID  +KED QGN+KRGKLPVL D S ND+RDN  NV
Sbjct: 1967 ERPFLLNSFGTSTLGSLGLNCSGSIDAHQKEDGQGNSKRGKLPVLFDGSSNDVRDNCVNV 2026

Query: 655  GNGESTSSGLVSNPIRPDVLPSKGEEVAGSSSSKDKLPHWLREAVSSPVKLPDPELPPTV 476
            GNGESTSSGL+SNP RPD+L SKGEEV GSS+SKDKLPHWLREAVSSP KLPDPELPPTV
Sbjct: 2027 GNGESTSSGLLSNPSRPDLLHSKGEEVGGSSTSKDKLPHWLREAVSSPAKLPDPELPPTV 2086

Query: 475  SAIAHSVRMIYGEDKXXXXXXXXXXXXXXXPKDPRCSXXXXXXXXXXXXKQVLPDFVGTS 296
            SAIA SVR++YGEDK               PKDPRCS             + LPDF G S
Sbjct: 2087 SAIAQSVRLLYGEDKPTIPPFVIPGPPPSLPKDPRCSVKKKKKRRSHKFSRGLPDFAGNS 2146

Query: 295  KEFHSSHHVDNGXXXXXXXXXXXXXXSQTGTPGPQQVESDLNLPPLNLKVANPXXXXXXX 116
            ++ H SHHVDNG              S TG  G QQ+ESDLNLPPLNLKVA+        
Sbjct: 2147 RDLHRSHHVDNGASSSLPLGPSLPLLSHTGALGTQQIESDLNLPPLNLKVAS----SSHS 2202

Query: 115  XXXXXSGLSPSPEVLQLVASCVAPGPHLPSIPSSPSF 5
                 SGLSPSPEVLQLVASCVAPGPHLPSI  + +F
Sbjct: 2203 SKKASSGLSPSPEVLQLVASCVAPGPHLPSITGASNF 2239


>ref|XP_003631193.1| PREDICTED: uncharacterized protein LOC100247555 [Vitis vinifera]
          Length = 2355

 Score =  325 bits (832), Expect = 2e-86
 Identities = 190/400 (47%), Positives = 232/400 (58%), Gaps = 4/400 (1%)
 Frame = -2

Query: 1195 EQVKVFQGPAFPVQRXXXXXXXXXXSAHFPISDGMMERALHGSKFLLPPKFQNHLTDMKL 1016
            EQ+K+ +GPA P+ +          S    ISDGMM RALHGS+   P KFQ+HLTDMKL
Sbjct: 1864 EQLKILEGPALPMPKSSKSTKGNKSSLFPSISDGMMMRALHGSRLGAPMKFQSHLTDMKL 1923

Query: 1015 GIGDSASGLPHFRTMDRHGLQNDHFAPLPSWSYDMNRVKFSEDASAETSDRPGTSSNVLT 836
            G GD AS LPHF    R GLQNDHF+P+P W+ D     F  D+S+  SDRPGTSSN+  
Sbjct: 1924 GFGDLASSLPHFDPSHRLGLQNDHFSPVPHWNSDKFPTNFVRDSSSGPSDRPGTSSNIHM 1983

Query: 835  ERPXXXXXXXXXXXXXXXXXXXXGIDIQKKEDDQGNTKRGKLPVLLDESPNDMRDNRANV 656
            E+P                      D+ +KED+ G TK GKLP LLD S N +RD+  N+
Sbjct: 1984 EQPFLLNSFGTSSLGSLGLTSSSSFDLLQKEDELGATKYGKLPSLLDRSLNLLRDSHNNM 2043

Query: 655  GNGESTSSGLVSNPIRP-DVLPSKGEEVAGSSSSKDKLPHWLREAVSSPVKLPDPELPPT 479
            G GESTSSGL+ +P +   +  SKG+EV GSS SK+KLPHWLREAVS+P K PDPELPPT
Sbjct: 2044 GAGESTSSGLMPDPNKGLSLSNSKGKEVEGSSPSKNKLPHWLREAVSAPSKPPDPELPPT 2103

Query: 478  VSAIAHSVRMIYGEDKXXXXXXXXXXXXXXXPKDPRCSXXXXXXXXXXXXKQVLPDFVGT 299
            VSAIA SVR++YGE+K               PKDPR +            +++  D  GT
Sbjct: 2104 VSAIAQSVRLLYGEEKPTIPPFVAPGPPPSLPKDPRLN-LKKKKRRSHVLRRLSGDVAGT 2162

Query: 298  SKEFHSSHHVDNGXXXXXXXXXXXXXXSQ--TGTPGPQQVESDLNLPPLNLKVANP-XXX 128
            S  F SS H +N                Q   G  G   +E +LNLPPLN+ + NP    
Sbjct: 2163 SWNFQSSLHGENFASSSVPLAPPFPLLPQNTAGASGLPWIEPNLNLPPLNINMMNPSSSS 2222

Query: 127  XXXXXXXXXSGLSPSPEVLQLVASCVAPGPHLPSIPSSPS 8
                     +GLSPSPEVLQLVASCVAPGPH+P +P  PS
Sbjct: 2223 SFLKPQKKSTGLSPSPEVLQLVASCVAPGPHIPPVPGMPS 2262


>emb|CBI27197.3| unnamed protein product [Vitis vinifera]
          Length = 1638

 Score =  259 bits (663), Expect = 7e-67
 Identities = 143/276 (51%), Positives = 173/276 (62%), Gaps = 1/276 (0%)
 Frame = -2

Query: 1195 EQVKVFQGPAFPVQRXXXXXXXXXXSAHFPISDGMMERALHGSKFLLPPKFQNHLTDMKL 1016
            EQ+K+ +GPA P+ +          S    ISDGMM RALHGS+   P KFQ+HLTDMKL
Sbjct: 1251 EQLKILEGPALPMPKSSKSTKGNKSSLFPSISDGMMMRALHGSRLGAPMKFQSHLTDMKL 1310

Query: 1015 GIGDSASGLPHFRTMDRHGLQNDHFAPLPSWSYDMNRVKFSEDASAETSDRPGTSSNVLT 836
            G GD AS LPHF    R GLQNDHF+P+P W+ D     F  D+S+  SDRPGTSSN+  
Sbjct: 1311 GFGDLASSLPHFDPSHRLGLQNDHFSPVPHWNSDKFPTNFVRDSSSGPSDRPGTSSNIHM 1370

Query: 835  ERPXXXXXXXXXXXXXXXXXXXXGIDIQKKEDDQGNTKRGKLPVLLDESPNDMRDNRANV 656
            E+P                      D+ +KED+ G TK GKLP LLD S N +RD+  N+
Sbjct: 1371 EQPFLLNSFGTSSLGSLGLTSSSSFDLLQKEDELGATKYGKLPSLLDRSLNLLRDSHNNM 1430

Query: 655  GNGESTSSGLVSNPIRP-DVLPSKGEEVAGSSSSKDKLPHWLREAVSSPVKLPDPELPPT 479
            G GESTSSGL+ +P +   +  SKG+EV GSS SK+KLPHWLREAVS+P K PDPELPPT
Sbjct: 1431 GAGESTSSGLMPDPNKGLSLSNSKGKEVEGSSPSKNKLPHWLREAVSAPSKPPDPELPPT 1490

Query: 478  VSAIAHSVRMIYGEDKXXXXXXXXXXXXXXXPKDPR 371
            VSAIA SVR++YGE+K               PKDPR
Sbjct: 1491 VSAIAQSVRLLYGEEKPTIPPFVAPGPPPSLPKDPR 1526



 Score = 58.2 bits (139), Expect = 4e-06
 Identities = 25/30 (83%), Positives = 27/30 (90%)
 Frame = -2

Query: 97   GLSPSPEVLQLVASCVAPGPHLPSIPSSPS 8
            GLSPSPEVLQLVASCVAPGPH+P +P  PS
Sbjct: 1550 GLSPSPEVLQLVASCVAPGPHIPPVPGMPS 1579


>ref|XP_002303505.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222840937|gb|EEE78484.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 2327

 Score =  252 bits (644), Expect = 1e-64
 Identities = 164/393 (41%), Positives = 215/393 (54%), Gaps = 3/393 (0%)
 Frame = -2

Query: 1195 EQVKVFQGPAFPVQRXXXXXXXXXXSAHFPISDGMMERALHGSKFLLPPKFQNHLTDMKL 1016
            EQ+K   G AFP+ +          S    I +GMM RALHGS+   P KFQ+HLTDMKL
Sbjct: 1859 EQLKFLDGSAFPLLKTLKATKSSKSSLFPSIPEGMMTRALHGSR---PSKFQSHLTDMKL 1915

Query: 1015 GIGDSASGLPHFRTMDRHGLQNDHFAPLPSWSYDMNRVKFSEDASAETSDRPGTSSNVLT 836
            G GD +S LPHF  +D+  L+N+HF+P+P+W+ D  +  F  D+SA      G S +V +
Sbjct: 1916 GFGDLSSSLPHFEPLDQLSLRNEHFSPIPTWNPDELQANFVGDSSA------GPSLHVSS 1969

Query: 835  ERPXXXXXXXXXXXXXXXXXXXXGIDIQKKEDDQGNTKRGKLPVLLDESPNDMRDNRANV 656
            E+P                      D+Q++E++    K GKLP LLD+S +  RD++ NV
Sbjct: 1970 EKPFLLSSFGASNLATLGLNSSTSFDLQRREEEYETMKYGKLPSLLDKSVHISRDSQNNV 2029

Query: 655  GNGESTSSGLVSNPIR-PDVLPSKGEEVAGSSSSKDKLPHWLREAVSSPVKLPDPELPPT 479
            G GE ++SGL  +P +  + + SKG+EV GSSSS +KLPHWLREAV++PVK P+PELPPT
Sbjct: 2030 GIGELSNSGLFLHPSKFLNPINSKGKEVVGSSSS-NKLPHWLREAVTAPVKPPEPELPPT 2088

Query: 478  VSAIAHSVRMIYGEDKXXXXXXXXXXXXXXXPKDPRCSXXXXXXXXXXXXKQVLPDFVGT 299
            VSAIA SVR++YGE++               PKDPR              +Q   D  G+
Sbjct: 2089 VSAIAQSVRVLYGENQPTIPPFVIPGPPPSQPKDPRWILRKKKKRRSHMFRQFPLDTGGS 2148

Query: 298  SKEFHSSHHVDNGXXXXXXXXXXXXXXSQTGTPGPQQVESDLNLPPLNLKVAN--PXXXX 125
            +++F    H   G                +G P     ESDLNLP  +L   N       
Sbjct: 2149 TQDFRYGIH---GCNVASTSIPPPLVPETSGRPWN---ESDLNLPLPSLSKMNSLTSSAY 2202

Query: 124  XXXXXXXXSGLSPSPEVLQLVASCVAPGPHLPS 26
                     GLSPSPEVLQLVASCVAPGPHL S
Sbjct: 2203 LNVQKKTTMGLSPSPEVLQLVASCVAPGPHLTS 2235


>ref|XP_002523656.1| chromodomain helicase DNA binding protein, putative [Ricinus
            communis] gi|223537108|gb|EEF38742.1| chromodomain
            helicase DNA binding protein, putative [Ricinus communis]
          Length = 2257

 Score =  249 bits (635), Expect = 1e-63
 Identities = 166/395 (42%), Positives = 202/395 (51%), Gaps = 5/395 (1%)
 Frame = -2

Query: 1195 EQVKVFQGPAFPVQRXXXXXXXXXXSAHFPISDGMMERALHGSKFLLPPKF-QNHLTDMK 1019
            EQ+K+  GP  P  +          S    I +GMM RALHGS+ + PPKF Q HLTDMK
Sbjct: 1774 EQMKILDGPPLPGSKTIKLSKSSKPSLFPSIPEGMMARALHGSRLVAPPKFHQAHLTDMK 1833

Query: 1018 LGIGDSASGLPHFRTMDRHGLQNDHFAPLPSWSYDMNRVKFSEDASAETSDRPGTSSNVL 839
            LG GD    LPHF   D+ G QN+HF  +P+W+ +  R  F+ D+SA     P TS++  
Sbjct: 1834 LGFGDLPPSLPHFEVPDQIGFQNEHFGSMPTWNPERFRRNFTGDSSAG----PSTSNS-- 1887

Query: 838  TERPXXXXXXXXXXXXXXXXXXXXGIDIQKKEDDQGNTKRGKLPVLLDESPNDMRDNRAN 659
             E P                      D   +ED+   TK GKLP LLD S N   D++ N
Sbjct: 1888 -EMPFLLNSLGSSNLGSLGFNSFSSFDSHHREDEHNATKYGKLPSLLDRSLNLACDSQNN 1946

Query: 658  VGNGESTSSGLVSNPI-RPDVLPSKGEEVAGSSSSKDKLPHWLREAVSSPVKLPDPELPP 482
            VGNGES+ S L   P  R +   SKG+EV GSSSSK+KLPHWLREAVSSP K P+P+LPP
Sbjct: 1947 VGNGESSGSALFPEPNKRLNNSHSKGKEVVGSSSSKNKLPHWLREAVSSPAKPPEPDLPP 2006

Query: 481  TVSAIAHSVRMIYGEDKXXXXXXXXXXXXXXXPKDPRCSXXXXXXXXXXXXKQVLPDFVG 302
            TVSAIA SVR++YGE+K               PKDPR              +Q   D  G
Sbjct: 2007 TVSAIAQSVRVLYGENKPTIPPFVIPGPPPSQPKDPRRILRKKKKRRSHMFRQFPLDTAG 2066

Query: 301  TSKEFHSSHHVDN--GXXXXXXXXXXXXXXSQTGTPGPQQVESDLNLPPLNLKVANP-XX 131
            + + F SS    N                    GT G  + +SD N    NL + N    
Sbjct: 2067 SMQNFRSSILGSNIASSSIPPAPTFQPLQLLPPGTSGHTRNDSDPNEHFRNLDMINSLTS 2126

Query: 130  XXXXXXXXXXSGLSPSPEVLQLVASCVAPGPHLPS 26
                       GLSPSPEVLQLVA+CVAPGPHL S
Sbjct: 2127 SYSKLPKKTSMGLSPSPEVLQLVAACVAPGPHLSS 2161


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