BLASTX nr result

ID: Glycyrrhiza24_contig00021060 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00021060
         (232 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321562.1| predicted protein [Populus trichocarpa] gi|2...   103   2e-20
ref|XP_003608925.1| WD repeat-containing protein [Medicago trunc...   102   4e-20
ref|XP_003527034.1| PREDICTED: F-box/WD repeat-containing protei...   101   6e-20
ref|XP_003522361.1| PREDICTED: vegetative incompatibility protei...   101   7e-20
ref|XP_003525485.1| PREDICTED: uncharacterized WD repeat-contain...   100   9e-20

>ref|XP_002321562.1| predicted protein [Populus trichocarpa] gi|222868558|gb|EEF05689.1|
           predicted protein [Populus trichocarpa]
          Length = 346

 Score =  103 bits (256), Expect = 2e-20
 Identities = 52/77 (67%), Positives = 61/77 (79%)
 Frame = +2

Query: 2   TNSILCLAVVSDLVCSGSADKTIRIWRGVHREYSCVAVLQGHTGSIKCLTAVLEQHCNHH 181
           T SILCLAVVSDLV SGSADKTIRIWRGV R YSC+AVL+GH G +KCLTA +++     
Sbjct: 265 TQSILCLAVVSDLVFSGSADKTIRIWRGVDRSYSCLAVLEGHGGPVKCLTASIDRR---- 320

Query: 182 SSDQNEASFLVYSGSLD 232
               ++ASFL+YSGSLD
Sbjct: 321 --SSSDASFLLYSGSLD 335


>ref|XP_003608925.1| WD repeat-containing protein [Medicago truncatula]
           gi|355509980|gb|AES91122.1| WD repeat-containing protein
           [Medicago truncatula]
          Length = 401

 Score =  102 bits (253), Expect = 4e-20
 Identities = 54/81 (66%), Positives = 60/81 (74%), Gaps = 4/81 (4%)
 Frame = +2

Query: 2   TNSILCLAVVSDLVCSGSADKTIRIWRG----VHREYSCVAVLQGHTGSIKCLTAVLEQH 169
           T SILCLAVVSDLVCSGS DKTIRIWRG    V REY C++VL+GH G IKCLT V +  
Sbjct: 313 TKSILCLAVVSDLVCSGSEDKTIRIWRGNTNNVLREYCCLSVLEGHKGPIKCLTIVFD-- 370

Query: 170 CNHHSSDQNEASFLVYSGSLD 232
              H    +EASFL+YSGSLD
Sbjct: 371 ---HFDQPSEASFLIYSGSLD 388


>ref|XP_003527034.1| PREDICTED: F-box/WD repeat-containing protein sel-10-like [Glycine
           max]
          Length = 421

 Score =  101 bits (252), Expect = 6e-20
 Identities = 52/81 (64%), Positives = 66/81 (81%), Gaps = 4/81 (4%)
 Frame = +2

Query: 2   TNSILCLAVVSDLVCSGSADKTIRIWRGV--HREYSCVAVLQGHTGSIKCLTAVLEQHCN 175
           T SILCL+VV+DLVCSGSAD TIRIWRG     EYSC+AVL+GH  SIKC++AV++ + N
Sbjct: 328 TKSILCLSVVADLVCSGSADTTIRIWRGCVDSHEYSCLAVLEGHRASIKCISAVVDCNNN 387

Query: 176 HHSSDQNEA--SFLVYSGSLD 232
           ++++ Q+EA  SFLVYSG LD
Sbjct: 388 NNNTSQSEALLSFLVYSGGLD 408


>ref|XP_003522361.1| PREDICTED: vegetative incompatibility protein HET-E-1-like [Glycine
           max]
          Length = 418

 Score =  101 bits (251), Expect = 7e-20
 Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 4/81 (4%)
 Frame = +2

Query: 2   TNSILCLAVVSDLVCSGSADKTIRIWRGV--HREYSCVAVLQGHTGSIKCLTAVLEQHCN 175
           T SILCL+V +DLVCSGSADKTIR+WRG     EYSC+AVL+GH GSIKC++AV++ HCN
Sbjct: 326 TMSILCLSVAADLVCSGSADKTIRVWRGSVDAHEYSCLAVLEGHRGSIKCISAVVD-HCN 384

Query: 176 HHSS-DQNEA-SFLVYSGSLD 232
           + ++  Q+EA SFLVYSG LD
Sbjct: 385 NTNTWSQSEALSFLVYSGGLD 405


>ref|XP_003525485.1| PREDICTED: uncharacterized WD repeat-containing protein
           alr3466-like [Glycine max]
          Length = 394

 Score =  100 bits (250), Expect = 9e-20
 Identities = 50/77 (64%), Positives = 59/77 (76%)
 Frame = +2

Query: 2   TNSILCLAVVSDLVCSGSADKTIRIWRGVHREYSCVAVLQGHTGSIKCLTAVLEQHCNHH 181
           T SILCLAVVSDLVCSGS DKT+RIWRGV +EYSC+AVL+GH   IK LTA +++  +  
Sbjct: 305 TRSILCLAVVSDLVCSGSEDKTVRIWRGVQKEYSCLAVLEGHRSPIKSLTAAVDR--SEQ 362

Query: 182 SSDQNEASFLVYSGSLD 232
             +  E SFLVYS SLD
Sbjct: 363 DPNSEEPSFLVYSASLD 379


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