BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00021053
         (344 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003529817.1| PREDICTED: pentatricopeptide repeat-containi...   218   3e-55
ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containi...   183   1e-44
emb|CBI36234.3| unnamed protein product [Vitis vinifera]              183   1e-44
ref|XP_002890108.1| pentatricopeptide repeat-containing protein ...   172   3e-41
ref|XP_002303270.1| predicted protein [Populus trichocarpa] gi|2...   171   6e-41

>ref|XP_003529817.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Glycine max]
          Length = 882

 Score =  218 bits (556), Expect = 3e-55
 Identities = 104/114 (91%), Positives = 110/114 (96%)
 Frame = -2

Query: 343 ILGLRINNRCFEALFFFREMMRRLKPNSVTLVCVLSACARIGALTCGKEIHAYALRTGVS 164
           ILGLRINNRCFEALFFFREM+RRLKPNSVTLVCVLSACARIGALTCGKEIHA+ALRTGVS
Sbjct: 482 ILGLRINNRCFEALFFFREMIRRLKPNSVTLVCVLSACARIGALTCGKEIHAHALRTGVS 541

Query: 163 FDGFLPNAILDMYVRCGRMEYAWKQFFSGDQDVSAWNILLTGYAERGKGTLATE 2
           FDGF+PNAILDMYVRCGRMEYAWKQFFS D +V++WNILLTGYAERGKG  ATE
Sbjct: 542 FDGFMPNAILDMYVRCGRMEYAWKQFFSVDHEVTSWNILLTGYAERGKGAHATE 595



 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 35/98 (35%), Positives = 54/98 (55%), Gaps = 2/98 (2%)
 Frame = -2

Query: 310 EALFFFREMMR-RLKPNSVTLVCVLSACARIGALTCGKEIHAYALRTGVSFDGFLPNAIL 134
           EAL  +  M+   +KP+  T  CVL  C  +  L  G+EIH + +R G   D  + NA++
Sbjct: 190 EALDLYHRMLWVGVKPDVYTFPCVLRTCGGMPNLVRGREIHVHVIRYGFESDVDVVNALI 249

Query: 133 DMYVRCGRMEYAWKQFFS-GDQDVSAWNILLTGYAERG 23
            MYV+CG +  A   F    ++D  +WN +++GY E G
Sbjct: 250 TMYVKCGDVNTARLVFDKMPNRDRISWNAMISGYFENG 287



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 33/105 (31%), Positives = 56/105 (53%), Gaps = 2/105 (1%)
 Frame = -2

Query: 343 ILGLRINNRCFEALFFFREMMRR-LKPNSVTLVCVLSACARIGALTCGKEIHAYALRTGV 167
           I G   N  C E L  F  M++  + P+ +T+  V++AC  +G    G++IH Y LRT  
Sbjct: 280 ISGYFENGVCLEGLRLFGMMIKYPVDPDLMTMTSVITACELLGDDRLGRQIHGYVLRTEF 339

Query: 166 SFDGFLPNAILDMYVRCGRMEYAWKQFFSGD-QDVSAWNILLTGY 35
             D  + N+++ MY   G +E A   F   + +D+ +W  +++GY
Sbjct: 340 GRDPSIHNSLIPMYSSVGLIEEAETVFSRTECRDLVSWTAMISGY 384


>ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Vitis vinifera]
          Length = 872

 Score =  183 bits (465), Expect = 1e-44
 Identities = 88/114 (77%), Positives = 102/114 (89%)
 Frame = -2

Query: 343 ILGLRINNRCFEALFFFREMMRRLKPNSVTLVCVLSACARIGALTCGKEIHAYALRTGVS 164
           ILGLR+N R FEALFFF++M+  LKPNSVTLV VLSACARIGAL+CGKEIHA+ALRTG+ 
Sbjct: 470 ILGLRLNYRSFEALFFFQQMILSLKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLG 529

Query: 163 FDGFLPNAILDMYVRCGRMEYAWKQFFSGDQDVSAWNILLTGYAERGKGTLATE 2
           FDGFLPNA+LDMYVRCGRME AW QF S ++DV++WNILLTGYA++GKG LA E
Sbjct: 530 FDGFLPNALLDMYVRCGRMEPAWNQFNSCEKDVASWNILLTGYAQQGKGGLAVE 583



 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 35/117 (29%), Positives = 61/117 (52%), Gaps = 3/117 (2%)
 Frame = -2

Query: 343 ILGLRINNRCFEALFFFREMMRR--LKPNSVTLVCVLSACARIGALTCGKEIHAYALRTG 170
           I G   N+ C E L  F  MMR   + P+ +T+  V+SAC  +G    G+E+H Y ++TG
Sbjct: 268 ISGYFENDVCLEGLRLFF-MMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTG 326

Query: 169 VSFDGFLPNAILDMYVRCGRMEYAWKQFFSGD-QDVSAWNILLTGYAERGKGTLATE 2
              +  + N+++ M+   G  + A   F   + +D+ +W  +++GY + G    A E
Sbjct: 327 FVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVE 383



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 32/96 (33%), Positives = 52/96 (54%), Gaps = 2/96 (2%)
 Frame = -2

Query: 310 EALFFFREMMR-RLKPNSVTLVCVLSACARIGALTCGKEIHAYALRTGVSFDGFLPNAIL 134
           EAL  +  M+   ++P+  T  CVL  C  +  L  G+E+H + +R G   D  + NA++
Sbjct: 178 EALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALI 237

Query: 133 DMYVRCGRMEYAWKQF-FSGDQDVSAWNILLTGYAE 29
            MYV+CG +  A   F     +D  +WN +++GY E
Sbjct: 238 TMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFE 273


>emb|CBI36234.3| unnamed protein product [Vitis vinifera]
          Length = 906

 Score =  183 bits (465), Expect = 1e-44
 Identities = 88/114 (77%), Positives = 102/114 (89%)
 Frame = -2

Query: 343 ILGLRINNRCFEALFFFREMMRRLKPNSVTLVCVLSACARIGALTCGKEIHAYALRTGVS 164
           ILGLR+N R FEALFFF++M+  LKPNSVTLV VLSACARIGAL+CGKEIHA+ALRTG+ 
Sbjct: 470 ILGLRLNYRSFEALFFFQQMILSLKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLG 529

Query: 163 FDGFLPNAILDMYVRCGRMEYAWKQFFSGDQDVSAWNILLTGYAERGKGTLATE 2
           FDGFLPNA+LDMYVRCGRME AW QF S ++DV++WNILLTGYA++GKG LA E
Sbjct: 530 FDGFLPNALLDMYVRCGRMEPAWNQFNSCEKDVASWNILLTGYAQQGKGGLAVE 583



 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 35/117 (29%), Positives = 61/117 (52%), Gaps = 3/117 (2%)
 Frame = -2

Query: 343 ILGLRINNRCFEALFFFREMMRR--LKPNSVTLVCVLSACARIGALTCGKEIHAYALRTG 170
           I G   N+ C E L  F  MMR   + P+ +T+  V+SAC  +G    G+E+H Y ++TG
Sbjct: 268 ISGYFENDVCLEGLRLFF-MMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTG 326

Query: 169 VSFDGFLPNAILDMYVRCGRMEYAWKQFFSGD-QDVSAWNILLTGYAERGKGTLATE 2
              +  + N+++ M+   G  + A   F   + +D+ +W  +++GY + G    A E
Sbjct: 327 FVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVE 383



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 32/96 (33%), Positives = 52/96 (54%), Gaps = 2/96 (2%)
 Frame = -2

Query: 310 EALFFFREMMR-RLKPNSVTLVCVLSACARIGALTCGKEIHAYALRTGVSFDGFLPNAIL 134
           EAL  +  M+   ++P+  T  CVL  C  +  L  G+E+H + +R G   D  + NA++
Sbjct: 178 EALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALI 237

Query: 133 DMYVRCGRMEYAWKQF-FSGDQDVSAWNILLTGYAE 29
            MYV+CG +  A   F     +D  +WN +++GY E
Sbjct: 238 TMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFE 273


>ref|XP_002890108.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297335950|gb|EFH66367.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 866

 Score =  172 bits (435), Expect = 3e-41
 Identities = 79/114 (69%), Positives = 93/114 (81%)
 Frame = -2

Query: 343 ILGLRINNRCFEALFFFREMMRRLKPNSVTLVCVLSACARIGALTCGKEIHAYALRTGVS 164
           I GLR+NNRCFEAL FFR+M   L+PN++TL   L+ACARIGAL CGKEIHA+ LRTGV 
Sbjct: 471 IAGLRLNNRCFEALIFFRQMKMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVG 530

Query: 163 FDGFLPNAILDMYVRCGRMEYAWKQFFSGDQDVSAWNILLTGYAERGKGTLATE 2
            D FLPNA+LDMYVRCGRM  AW QF S  +DVS+WNILLTGY+ERG+G++  E
Sbjct: 531 LDDFLPNALLDMYVRCGRMNIAWNQFNSQKKDVSSWNILLTGYSERGQGSVVVE 584



 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 35/101 (34%), Positives = 56/101 (55%), Gaps = 3/101 (2%)
 Frame = -2

Query: 310 EALFFFREMM--RRLKPNSVTLVCVLSACARIGALTCGKEIHAYALRTGVSFDGFLPNAI 137
           EA+  +  M+    +KP+  T  CVL  C  I  L  G+E+H + +R G   D  + NA+
Sbjct: 178 EAICLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGREVHVHVVRYGYELDIDVVNAL 237

Query: 136 LDMYVRCGRMEYAWKQF-FSGDQDVSAWNILLTGYAERGKG 17
           + MYV+CG ++ A   F     +D+ +WN +++GY E G G
Sbjct: 238 ITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMG 278



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
 Frame = -2

Query: 298 FFREMMRRLKPNSVTLVCVLSACARIGALTCGKEIHAYALRTGVSFDGFLPNAILDMYVR 119
           FF      + P+ +TL  V+SAC  +G    G++IHAY + TG + D  + N++  MY+ 
Sbjct: 285 FFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLY 344

Query: 118 CGRMEYAWKQFFSGD-QDVSAWNILLTGY 35
            G    A K F   D +D+ +W  +++GY
Sbjct: 345 AGSWREAEKLFSRMDCKDIVSWTTMISGY 373


>ref|XP_002303270.1| predicted protein [Populus trichocarpa] gi|222840702|gb|EEE78249.1|
           predicted protein [Populus trichocarpa]
          Length = 805

 Score =  171 bits (433), Expect = 6e-41
 Identities = 80/114 (70%), Positives = 94/114 (82%)
 Frame = -2

Query: 343 ILGLRINNRCFEALFFFREMMRRLKPNSVTLVCVLSACARIGALTCGKEIHAYALRTGVS 164
           I GLRINNRCFEAL FFR+M+ + KPNSVTL+  LSACAR+GAL CGKEIHA+AL+ G+ 
Sbjct: 410 INGLRINNRCFEALIFFRKMILKSKPNSVTLISALSACARVGALMCGKEIHAHALKAGMG 469

Query: 163 FDGFLPNAILDMYVRCGRMEYAWKQFFSGDQDVSAWNILLTGYAERGKGTLATE 2
           FDGFLPNAILD+YVRCGRM  A  QF   ++DV AWNILLTGYA++GKG +  E
Sbjct: 470 FDGFLPNAILDLYVRCGRMRTALNQFNLNEKDVGAWNILLTGYAQKGKGAMVME 523



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 31/78 (39%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
 Frame = -2

Query: 268 PNSVTLVCVLSACARIGALTCGKEIHAYALRTGVSFDGFLPNAILDMYVRCGRMEYAWKQ 89
           P+ VT+  VLSACA +G L  G ++H  A RTG      + N+++DMY +C R+E A + 
Sbjct: 335 PDEVTIASVLSACASLGQLDMGMKLHELAERTGHILYVVVANSLIDMYSKCKRIEKALEI 394

Query: 88  FFS-GDQDVSAWNILLTG 38
           F    D+DV +W  ++ G
Sbjct: 395 FHQIPDKDVISWTSVING 412



 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 33/105 (31%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
 Frame = -2

Query: 343 ILGLRINNRCFEAL-FFFREMMRRLKPNSVTLVCVLSACARIGALTCGKEIHAYALRTGV 167
           I G   N+ C E L  FFR     + P+ +T+  V+SAC  +G    G ++H+Y +RT  
Sbjct: 208 ISGYFENDECLEGLELFFRMRELSIDPDLMTMTSVISACELLGDERLGTQLHSYVVRTAY 267

Query: 166 SFDGFLPNAILDMYVRCGRMEYAWKQFFSGDQ--DVSAWNILLTG 38
             +  + N+++ MY+  G  + A +  FSG +  DV +W  +++G
Sbjct: 268 DGNISVYNSLIQMYLSVGHWKEA-ESVFSGMECRDVVSWTTIISG 311