BLASTX nr result

ID: Glycyrrhiza24_contig00021050 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00021050
         (493 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001236385.1| uncharacterized protein LOC100306277 [Glycin...   146   2e-33
gb|AFK34960.1| unknown [Lotus japonicus]                              143   2e-32
ref|NP_001235586.1| uncharacterized protein LOC100527659 [Glycin...   138   4e-31
gb|AFK39086.1| unknown [Medicago truncatula] gi|388516043|gb|AFK...   137   7e-31
ref|XP_003598543.1| Transcription initiation factor TFIID subuni...   135   3e-30

>ref|NP_001236385.1| uncharacterized protein LOC100306277 [Glycine max]
           gi|255628079|gb|ACU14384.1| unknown [Glycine max]
          Length = 177

 Score =  146 bits (368), Expect = 2e-33
 Identities = 72/100 (72%), Positives = 79/100 (79%)
 Frame = -2

Query: 492 NFSFSQPPPREVLLELAQNRNKMPFPKTVAVPGFPLPPDQDTLISPNYQFAIPNTGPSXX 313
           NFSFSQPPPREVLLELAQNRNK+P PKT+A PG PLPPDQDTLISPNYQFAIPN  P+  
Sbjct: 78  NFSFSQPPPREVLLELAQNRNKIPLPKTIAGPGIPLPPDQDTLISPNYQFAIPNKRPAQP 137

Query: 312 XXXXXXXEAANPSSSQEEKLDMQLDPPQRVSFPLPKHQKD 193
                  EA  P+ SQE+K+D Q +P QRVSFPLPK QKD
Sbjct: 138 LEETEDEEATIPNPSQEQKVDTQPNPHQRVSFPLPKRQKD 177


>gb|AFK34960.1| unknown [Lotus japonicus]
          Length = 183

 Score =  143 bits (360), Expect = 2e-32
 Identities = 71/99 (71%), Positives = 77/99 (77%)
 Frame = -2

Query: 492 NFSFSQPPPREVLLELAQNRNKMPFPKTVAVPGFPLPPDQDTLISPNYQFAIPNTGPSXX 313
           NFSFSQPPPREVLLELAQNRNK+P PKT+A PG PLPPDQDTLISPNYQFAIPN  P+  
Sbjct: 78  NFSFSQPPPREVLLELAQNRNKIPLPKTIAGPGVPLPPDQDTLISPNYQFAIPNKRPAEP 137

Query: 312 XXXXXXXEAANPSSSQEEKLDMQLDPPQRVSFPLPKHQK 196
                  EA   + SQEEK D+Q +P QRVSFPLPK QK
Sbjct: 138 IEDTEVEEATTSNPSQEEKTDVQQNPNQRVSFPLPKRQK 176


>ref|NP_001235586.1| uncharacterized protein LOC100527659 [Glycine max]
           gi|255632872|gb|ACU16789.1| unknown [Glycine max]
          Length = 174

 Score =  138 bits (348), Expect = 4e-31
 Identities = 71/100 (71%), Positives = 77/100 (77%)
 Frame = -2

Query: 492 NFSFSQPPPREVLLELAQNRNKMPFPKTVAVPGFPLPPDQDTLISPNYQFAIPNTGPSXX 313
           NFSFSQPPPREVLLELAQNRNK+P PKT+A PG PLPPDQDTLISPNYQFAIPN  P+  
Sbjct: 78  NFSFSQPPPREVLLELAQNRNKIPLPKTIAGPGIPLPPDQDTLISPNYQFAIPNKRPAEP 137

Query: 312 XXXXXXXEAANPSSSQEEKLDMQLDPPQRVSFPLPKHQKD 193
                  EA  P+ SQE   D+Q +P QRVSFPLPK QKD
Sbjct: 138 LEETEDEEATIPNPSQE---DVQPNPHQRVSFPLPKRQKD 174


>gb|AFK39086.1| unknown [Medicago truncatula] gi|388516043|gb|AFK46083.1| unknown
           [Medicago truncatula]
          Length = 179

 Score =  137 bits (346), Expect = 7e-31
 Identities = 69/102 (67%), Positives = 78/102 (76%), Gaps = 2/102 (1%)
 Frame = -2

Query: 492 NFSFSQPPPREVLLELAQNRNKMPFPKTVAVPGFPLPPDQDTLISPNYQFAIPN--TGPS 319
           NFSFSQPPPREVLLELAQNRNK+P PK++A PGFPLPPDQDTLI+PNYQFAIPN  +   
Sbjct: 78  NFSFSQPPPREVLLELAQNRNKIPLPKSIAGPGFPLPPDQDTLIAPNYQFAIPNKRSVEP 137

Query: 318 XXXXXXXXXEAANPSSSQEEKLDMQLDPPQRVSFPLPKHQKD 193
                      A+P+ SQEEK D + +P QRVSFPLPK QKD
Sbjct: 138 MEETEDEEVPNADPNPSQEEKTDAEQNPHQRVSFPLPKRQKD 179


>ref|XP_003598543.1| Transcription initiation factor TFIID subunit [Medicago truncatula]
           gi|355487591|gb|AES68794.1| Transcription initiation
           factor TFIID subunit [Medicago truncatula]
          Length = 179

 Score =  135 bits (341), Expect = 3e-30
 Identities = 69/102 (67%), Positives = 77/102 (75%), Gaps = 2/102 (1%)
 Frame = -2

Query: 492 NFSFSQPPPREVLLELAQNRNKMPFPKTVAVPGFPLPPDQDTLISPNYQFAIPN--TGPS 319
           NFSFSQPPPREVLLELAQNRNK+P PK++A PGFPL PDQDTLI+PNYQFAIPN  +   
Sbjct: 78  NFSFSQPPPREVLLELAQNRNKIPLPKSIAGPGFPLSPDQDTLIAPNYQFAIPNKRSVEP 137

Query: 318 XXXXXXXXXEAANPSSSQEEKLDMQLDPPQRVSFPLPKHQKD 193
                      A+P+ SQEEK D Q +P QRVSFPLPK QKD
Sbjct: 138 MEETEDEEVPNADPNPSQEEKTDAQQNPHQRVSFPLPKRQKD 179


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