BLASTX nr result

ID: Glycyrrhiza24_contig00021023 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00021023
         (269 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003551779.1| PREDICTED: auxin transport protein BIG-like ...   187   6e-46
ref|XP_003621559.1| E3 ubiquitin-protein ligase UBR4 [Medicago t...   187   8e-46
gb|ABN07919.1| Zinc finger, N-recognin; WD40-like [Medicago trun...   187   8e-46
ref|XP_002884312.1| predicted protein [Arabidopsis lyrata subsp....   178   5e-43
ref|NP_186875.2| E3 ubiquitin-protein ligase UBR4 [Arabidopsis t...   177   1e-42

>ref|XP_003551779.1| PREDICTED: auxin transport protein BIG-like [Glycine max]
          Length = 5112

 Score =  187 bits (476), Expect = 6e-46
 Identities = 83/89 (93%), Positives = 85/89 (95%)
 Frame = -3

Query: 267  FMEQHWYFCYTCDLTVSKGCCSVCAKVCRRGHRVVYSCSSRFFCDCGAGGVRGSSCQCLK 88
            FMEQHWYFCYTCDLTVSKGCCSVCAKVC RGHRVVYS SSRFFCDCGAGGVRGS+CQCLK
Sbjct: 1581 FMEQHWYFCYTCDLTVSKGCCSVCAKVCHRGHRVVYSRSSRFFCDCGAGGVRGSNCQCLK 1640

Query: 87   PRKFTGDSSAPVRGSNTFQSFLPFPEDAE 1
            PRKFTGDSSAPVRGSNTFQSFL FPED +
Sbjct: 1641 PRKFTGDSSAPVRGSNTFQSFLSFPEDGD 1669


>ref|XP_003621559.1| E3 ubiquitin-protein ligase UBR4 [Medicago truncatula]
            gi|355496574|gb|AES77777.1| E3 ubiquitin-protein ligase
            UBR4 [Medicago truncatula]
          Length = 5158

 Score =  187 bits (475), Expect = 8e-46
 Identities = 82/89 (92%), Positives = 85/89 (95%)
 Frame = -3

Query: 267  FMEQHWYFCYTCDLTVSKGCCSVCAKVCRRGHRVVYSCSSRFFCDCGAGGVRGSSCQCLK 88
            FMEQHWYFCYTCDLTVSKGCCSVCAKVC RGHRVVYS SSRFFCDCGAGGVRGS+CQCLK
Sbjct: 1636 FMEQHWYFCYTCDLTVSKGCCSVCAKVCHRGHRVVYSRSSRFFCDCGAGGVRGSNCQCLK 1695

Query: 87   PRKFTGDSSAPVRGSNTFQSFLPFPEDAE 1
            PRKFT D+SAPVRGSNTFQSFLPFPED +
Sbjct: 1696 PRKFTADNSAPVRGSNTFQSFLPFPEDGD 1724


>gb|ABN07919.1| Zinc finger, N-recognin; WD40-like [Medicago truncatula]
          Length = 2165

 Score =  187 bits (475), Expect = 8e-46
 Identities = 82/89 (92%), Positives = 85/89 (95%)
 Frame = -3

Query: 267  FMEQHWYFCYTCDLTVSKGCCSVCAKVCRRGHRVVYSCSSRFFCDCGAGGVRGSSCQCLK 88
            FMEQHWYFCYTCDLTVSKGCCSVCAKVC RGHRVVYS SSRFFCDCGAGGVRGS+CQCLK
Sbjct: 1520 FMEQHWYFCYTCDLTVSKGCCSVCAKVCHRGHRVVYSRSSRFFCDCGAGGVRGSNCQCLK 1579

Query: 87   PRKFTGDSSAPVRGSNTFQSFLPFPEDAE 1
            PRKFT D+SAPVRGSNTFQSFLPFPED +
Sbjct: 1580 PRKFTADNSAPVRGSNTFQSFLPFPEDGD 1608


>ref|XP_002884312.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
            gi|297330152|gb|EFH60571.1| predicted protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 5090

 Score =  178 bits (451), Expect = 5e-43
 Identities = 78/89 (87%), Positives = 81/89 (91%)
 Frame = -3

Query: 267  FMEQHWYFCYTCDLTVSKGCCSVCAKVCRRGHRVVYSCSSRFFCDCGAGGVRGSSCQCLK 88
            FMEQHWYFCYTCDLTVSKGCCSVCAKVC RGHRVVYS SSRFFCDCGAGGVRGSSCQCLK
Sbjct: 1583 FMEQHWYFCYTCDLTVSKGCCSVCAKVCHRGHRVVYSRSSRFFCDCGAGGVRGSSCQCLK 1642

Query: 87   PRKFTGDSSAPVRGSNTFQSFLPFPEDAE 1
            PRKF G+ SAP RG+N FQSFLP  EDA+
Sbjct: 1643 PRKFNGNGSAPARGTNNFQSFLPLSEDAD 1671


>ref|NP_186875.2| E3 ubiquitin-protein ligase UBR4 [Arabidopsis thaliana]
            gi|338817663|sp|Q9SRU2.2|BIG_ARATH RecName: Full=Auxin
            transport protein BIG; AltName: Full=Protein ATTENUATED
            SHADE AVOIDANCE 1; AltName: Full=Protein CORYMBOSA1;
            AltName: Full=Protein DARK OVER-EXPRESSION OF CAB 1;
            AltName: Full=Protein LOW PHOSPHATE-RESISTANT ROOT 1;
            AltName: Full=Protein TRANSPORT INHIBITOR RESPONSE 3;
            AltName: Full=Protein UMBRELLA 1
            gi|332640264|gb|AEE73785.1| E3 ubiquitin-protein ligase
            UBR4 [Arabidopsis thaliana]
          Length = 5098

 Score =  177 bits (448), Expect = 1e-42
 Identities = 77/89 (86%), Positives = 81/89 (91%)
 Frame = -3

Query: 267  FMEQHWYFCYTCDLTVSKGCCSVCAKVCRRGHRVVYSCSSRFFCDCGAGGVRGSSCQCLK 88
            FMEQHWYFCYTCDLTVSKGCCSVCAKVC RGHRVVYS SSRFFCDCGAGGVRGSSCQCLK
Sbjct: 1584 FMEQHWYFCYTCDLTVSKGCCSVCAKVCHRGHRVVYSRSSRFFCDCGAGGVRGSSCQCLK 1643

Query: 87   PRKFTGDSSAPVRGSNTFQSFLPFPEDAE 1
            PRK+ G+ SAP RG+N FQSFLP  EDA+
Sbjct: 1644 PRKYNGNGSAPARGTNNFQSFLPLSEDAD 1672


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