BLASTX nr result

ID: Glycyrrhiza24_contig00021016 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00021016
         (523 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548117.1| PREDICTED: DNA repair helicase UVH6-like [Gl...   339   2e-91
ref|XP_003518602.1| PREDICTED: DNA repair helicase UVH6-like [Gl...   338   2e-91
ref|XP_004158946.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair h...   321   5e-86
ref|XP_004148902.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair h...   321   5e-86
ref|XP_002520757.1| DNA repair helicase rad3/xp-d, putative [Ric...   317   9e-85

>ref|XP_003548117.1| PREDICTED: DNA repair helicase UVH6-like [Glycine max]
          Length = 758

 Score =  339 bits (869), Expect = 2e-91
 Identities = 167/173 (96%), Positives = 171/173 (98%)
 Frame = +3

Query: 3   AAVLPPGVYTLQDLRAVGKEKGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQ 182
           +AVLPPGVYTLQDLR  GKEKGWCPY+LARHMVQFANVVVYSYQYLLDPKVAGIISKEMQ
Sbjct: 167 SAVLPPGVYTLQDLRVYGKEKGWCPYYLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQ 226

Query: 183 KESVVVFDEAHNIDNVCIEALSVSVRRQTIEGARRNINRMRQEIDKFKATDAGRLRAEYN 362
           KESVVVFDEAHNIDNVCIEALSVSVRRQTIEGARRN+NRMRQEIDKFKATDAGRLRAEYN
Sbjct: 227 KESVVVFDEAHNIDNVCIEALSVSVRRQTIEGARRNLNRMRQEIDKFKATDAGRLRAEYN 286

Query: 363 RLVEGLALRGDLPASDAWLANPALPDDILKEAVPGNIRRAEHFIHVLRRLVQY 521
           RLVEGLALRGDLPA+DAWLANPALPDDILKEAVPGNIRRAEHFIHVLRRLVQY
Sbjct: 287 RLVEGLALRGDLPATDAWLANPALPDDILKEAVPGNIRRAEHFIHVLRRLVQY 339


>ref|XP_003518602.1| PREDICTED: DNA repair helicase UVH6-like [Glycine max]
          Length = 758

 Score =  338 bits (868), Expect = 2e-91
 Identities = 167/173 (96%), Positives = 172/173 (99%)
 Frame = +3

Query: 3   AAVLPPGVYTLQDLRAVGKEKGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQ 182
           +AVLPPGVYTLQDLRA GKEKGWCPY+LARHMVQFANVVVYSYQYLLDPKVAGIISKEMQ
Sbjct: 167 SAVLPPGVYTLQDLRAYGKEKGWCPYYLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQ 226

Query: 183 KESVVVFDEAHNIDNVCIEALSVSVRRQTIEGARRNINRMRQEIDKFKATDAGRLRAEYN 362
           KESVVVFDEAHNIDNVCIEALSVSVRRQTIEGARRN++RMRQEIDKFKATDAGRLRAEYN
Sbjct: 227 KESVVVFDEAHNIDNVCIEALSVSVRRQTIEGARRNLSRMRQEIDKFKATDAGRLRAEYN 286

Query: 363 RLVEGLALRGDLPASDAWLANPALPDDILKEAVPGNIRRAEHFIHVLRRLVQY 521
           RLVEGLALRGDLPA+DAWLANPALPDDILKEAVPGNIRRAEHFIHVLRRLVQY
Sbjct: 287 RLVEGLALRGDLPATDAWLANPALPDDILKEAVPGNIRRAEHFIHVLRRLVQY 339


>ref|XP_004158946.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair helicase UVH6-like
           [Cucumis sativus]
          Length = 598

 Score =  321 bits (822), Expect = 5e-86
 Identities = 157/173 (90%), Positives = 166/173 (95%)
 Frame = +3

Query: 3   AAVLPPGVYTLQDLRAVGKEKGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQ 182
           +AVLPPGVYTLQDLRA G +KGWCPYFLARHMVQFANVVVYSYQYLLDPKVA IISKEMQ
Sbjct: 167 SAVLPPGVYTLQDLRAFGTKKGWCPYFLARHMVQFANVVVYSYQYLLDPKVASIISKEMQ 226

Query: 183 KESVVVFDEAHNIDNVCIEALSVSVRRQTIEGARRNINRMRQEIDKFKATDAGRLRAEYN 362
           +ESVVVFDEAHNIDNVCIEALSVSVRRQTIEGARRN+N+MRQEI++FK TDAGRLRAEYN
Sbjct: 227 RESVVVFDEAHNIDNVCIEALSVSVRRQTIEGARRNLNKMRQEIERFKETDAGRLRAEYN 286

Query: 363 RLVEGLALRGDLPASDAWLANPALPDDILKEAVPGNIRRAEHFIHVLRRLVQY 521
           RLVEGLA RG+LP SD WL+NPALPDDILKEAVPGNIRRAEHFIHVLRRLVQY
Sbjct: 287 RLVEGLAQRGNLPISDTWLSNPALPDDILKEAVPGNIRRAEHFIHVLRRLVQY 339


>ref|XP_004148902.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair helicase UVH6-like
           [Cucumis sativus]
          Length = 919

 Score =  321 bits (822), Expect = 5e-86
 Identities = 157/173 (90%), Positives = 166/173 (95%)
 Frame = +3

Query: 3   AAVLPPGVYTLQDLRAVGKEKGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQ 182
           +AVLPPGVYTLQDLRA G +KGWCPYFLARHMVQFANVVVYSYQYLLDPKVA IISKEMQ
Sbjct: 328 SAVLPPGVYTLQDLRAFGTKKGWCPYFLARHMVQFANVVVYSYQYLLDPKVASIISKEMQ 387

Query: 183 KESVVVFDEAHNIDNVCIEALSVSVRRQTIEGARRNINRMRQEIDKFKATDAGRLRAEYN 362
           +ESVVVFDEAHNIDNVCIEALSVSVRRQTIEGARRN+N+MRQEI++FK TDAGRLRAEYN
Sbjct: 388 RESVVVFDEAHNIDNVCIEALSVSVRRQTIEGARRNLNKMRQEIERFKETDAGRLRAEYN 447

Query: 363 RLVEGLALRGDLPASDAWLANPALPDDILKEAVPGNIRRAEHFIHVLRRLVQY 521
           RLVEGLA RG+LP SD WL+NPALPDDILKEAVPGNIRRAEHFIHVLRRLVQY
Sbjct: 448 RLVEGLAQRGNLPISDTWLSNPALPDDILKEAVPGNIRRAEHFIHVLRRLVQY 500


>ref|XP_002520757.1| DNA repair helicase rad3/xp-d, putative [Ricinus communis]
           gi|223540142|gb|EEF41719.1| DNA repair helicase
           rad3/xp-d, putative [Ricinus communis]
          Length = 758

 Score =  317 bits (811), Expect = 9e-85
 Identities = 154/173 (89%), Positives = 165/173 (95%)
 Frame = +3

Query: 3   AAVLPPGVYTLQDLRAVGKEKGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQ 182
           AAVLPPGVYTLQDLR  GKEKGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQ
Sbjct: 167 AAVLPPGVYTLQDLRTYGKEKGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQ 226

Query: 183 KESVVVFDEAHNIDNVCIEALSVSVRRQTIEGARRNINRMRQEIDKFKATDAGRLRAEYN 362
           KESVVVFDEAHNIDNVCIEALSVSVR+QT+EGA RN++R+ QEI++FKATDAGRLRAEYN
Sbjct: 227 KESVVVFDEAHNIDNVCIEALSVSVRKQTLEGASRNLSRINQEIERFKATDAGRLRAEYN 286

Query: 363 RLVEGLALRGDLPASDAWLANPALPDDILKEAVPGNIRRAEHFIHVLRRLVQY 521
           RLVEGLA RG+L  +D WL+NPALPDDILKEAVPGNIRRAEHF+HVLRRLVQY
Sbjct: 287 RLVEGLAQRGNLAVTDTWLSNPALPDDILKEAVPGNIRRAEHFLHVLRRLVQY 339


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