BLASTX nr result

ID: Glycyrrhiza24_contig00021014 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00021014
         (315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003601352.1| Tir-nbs-lrr resistance protein [Medicago tru...    67   1e-09
ref|XP_003594998.1| TMV resistance protein N [Medicago truncatul...    56   3e-06
gb|ABD33387.2| TIR [Medicago truncatula]                               56   3e-06

>ref|XP_003601352.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
            gi|355490400|gb|AES71603.1| Tir-nbs-lrr resistance
            protein [Medicago truncatula]
          Length = 1545

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 45/109 (41%), Positives = 62/109 (56%), Gaps = 7/109 (6%)
 Frame = +2

Query: 2    ASITIPPIPKSDFRAFIFYIILSEGLHLYKGTCSLKCSIYEPGKEVDAWSPCYLQMLSDV 181
            ASI IPPIPKSD    IF II SEGL  +    +L C+IY+  KEV  W   +     + 
Sbjct: 1358 ASIVIPPIPKSDLCCLIFCIIFSEGLTFFYN--NLCCTIYQHKKEVHQWDTNW----GNE 1411

Query: 182  TLLISDHVLVSRYINH-KIRENG------DHNLSFEFTRAVWNEDEEKF 307
              L SDHVL+  + ++ K+ E G      D+NL+FEF    + +DEE++
Sbjct: 1412 RTLFSDHVLIICWCHYNKLVELGSERGSDDYNLTFEFKLKEYVDDEEQW 1460


>ref|XP_003594998.1| TMV resistance protein N [Medicago truncatula]
            gi|355484046|gb|AES65249.1| TMV resistance protein N
            [Medicago truncatula]
          Length = 1179

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 38/93 (40%), Positives = 53/93 (56%), Gaps = 4/93 (4%)
 Frame = +2

Query: 2    ASITIPPIPKSDFRAFIFYIILSEGLHL-YKGTCSLKCSIYEPGKEVDAWSPCYLQMLSD 178
            ASI IPPIPK      +  + LSEGL+L + G   + C+IY  G   + WS  ++ +   
Sbjct: 1006 ASIIIPPIPKDGLNQIVLCVFLSEGLNLTFSG---VDCTIYNHGDRSNEWSISFVNVSG- 1061

Query: 179  VTLLISDHVLV--SRYINHKIRENGDH-NLSFE 268
               +ISDHVL+  S  I H+ R + DH +LSFE
Sbjct: 1062 --AMISDHVLLICSPAICHQTRVDNDHYSLSFE 1092


>gb|ABD33387.2| TIR [Medicago truncatula]
          Length = 1208

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 38/93 (40%), Positives = 53/93 (56%), Gaps = 4/93 (4%)
 Frame = +2

Query: 2    ASITIPPIPKSDFRAFIFYIILSEGLHL-YKGTCSLKCSIYEPGKEVDAWSPCYLQMLSD 178
            ASI IPPIPK      +  + LSEGL+L + G   + C+IY  G   + WS  ++ +   
Sbjct: 1035 ASIIIPPIPKDGLNQIVLCVFLSEGLNLTFSG---VDCTIYNHGDRSNEWSISFVNVSG- 1090

Query: 179  VTLLISDHVLV--SRYINHKIRENGDH-NLSFE 268
               +ISDHVL+  S  I H+ R + DH +LSFE
Sbjct: 1091 --AMISDHVLLICSPAICHQTRVDNDHYSLSFE 1121


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