BLASTX nr result

ID: Glycyrrhiza24_contig00021002 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00021002
         (571 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003549617.1| PREDICTED: uncharacterized protein LOC100781...   198   5e-49
ref|XP_003525508.1| PREDICTED: uncharacterized protein LOC100817...   191   6e-47
ref|XP_002318058.1| predicted protein [Populus trichocarpa] gi|2...   182   3e-44
ref|XP_002321609.1| predicted protein [Populus trichocarpa] gi|2...   174   7e-42
ref|XP_004161358.1| PREDICTED: U3 small nucleolar ribonucleoprot...   174   9e-42

>ref|XP_003549617.1| PREDICTED: uncharacterized protein LOC100781093 [Glycine max]
          Length = 516

 Score =  198 bits (504), Expect = 5e-49
 Identities = 110/174 (63%), Positives = 117/174 (67%)
 Frame = +1

Query: 49  DFFRGEKEKGSKRKAQLLHXXXXXXXXXXXXXXKPXXXXXXXXXXXXXXXXXXXXXXXXX 228
           DFF G+KE+GSKRKAQ+L               K                          
Sbjct: 228 DFFGGKKERGSKRKAQVLQESEYSDDEDDMEFDKQT------------------------ 263

Query: 229 XXXXXXXXXKGKPSTHEMQLKKIQSKIEQMEKANIEPKTWTMQGEVTAAKRPKNSALEVD 408
                    KG  S HE QL+KIQSKIE MEKANI+PKTWTMQGEVTAAKRPKNSALEVD
Sbjct: 264 ---------KGTASAHEKQLEKIQSKIELMEKANIDPKTWTMQGEVTAAKRPKNSALEVD 314

Query: 409 LDFEHNVRPAPVITEEVTASIEDMIQKRIIEGHFNDVQRAPKLPSKAPREVKEL 570
           LDFEHNVRPAPVITEEVTASIED+I+KRIIEGHFNDVQR PKLPSKAPREVKEL
Sbjct: 315 LDFEHNVRPAPVITEEVTASIEDIIKKRIIEGHFNDVQRVPKLPSKAPREVKEL 368


>ref|XP_003525508.1| PREDICTED: uncharacterized protein LOC100817724 [Glycine max]
          Length = 547

 Score =  191 bits (486), Expect = 6e-47
 Identities = 107/174 (61%), Positives = 113/174 (64%)
 Frame = +1

Query: 49  DFFRGEKEKGSKRKAQLLHXXXXXXXXXXXXXXKPXXXXXXXXXXXXXXXXXXXXXXXXX 228
           DFF G+KE+GSKRKAQ L               +                          
Sbjct: 242 DFFGGKKERGSKRKAQALQESDYSDEDDMELDKQT------------------------- 276

Query: 229 XXXXXXXXXKGKPSTHEMQLKKIQSKIEQMEKANIEPKTWTMQGEVTAAKRPKNSALEVD 408
                    KG  S HE QL+KIQSKIEQMEKANIE K WTMQGEVTAAKRPKNSALEVD
Sbjct: 277 ---------KGTASAHEKQLEKIQSKIEQMEKANIEQKAWTMQGEVTAAKRPKNSALEVD 327

Query: 409 LDFEHNVRPAPVITEEVTASIEDMIQKRIIEGHFNDVQRAPKLPSKAPREVKEL 570
           LDFEHNVRPAPVITEEVTASIED+I+KRIIEGHFNDVQR PKLP K PREVKEL
Sbjct: 328 LDFEHNVRPAPVITEEVTASIEDIIKKRIIEGHFNDVQRVPKLPPKGPREVKEL 381


>ref|XP_002318058.1| predicted protein [Populus trichocarpa] gi|222858731|gb|EEE96278.1|
           predicted protein [Populus trichocarpa]
          Length = 506

 Score =  182 bits (463), Expect = 3e-44
 Identities = 87/105 (82%), Positives = 99/105 (94%)
 Frame = +1

Query: 256 KGKPSTHEMQLKKIQSKIEQMEKANIEPKTWTMQGEVTAAKRPKNSALEVDLDFEHNVRP 435
           KG+ STHE QL+K+QS+IEQMEKAN+EPKTWTMQGEVTAA RPKNSALEVDLDFEHN+RP
Sbjct: 273 KGRLSTHEKQLQKLQSEIEQMEKANLEPKTWTMQGEVTAASRPKNSALEVDLDFEHNMRP 332

Query: 436 APVITEEVTASIEDMIQKRIIEGHFNDVQRAPKLPSKAPREVKEL 570
           APVITEEVTA++EDMI+ RIIEG FND+Q+AP LPSKAPRE+KEL
Sbjct: 333 APVITEEVTATLEDMIKNRIIEGQFNDIQKAPSLPSKAPRELKEL 377


>ref|XP_002321609.1| predicted protein [Populus trichocarpa] gi|222868605|gb|EEF05736.1|
           predicted protein [Populus trichocarpa]
          Length = 554

 Score =  174 bits (442), Expect = 7e-42
 Identities = 83/105 (79%), Positives = 98/105 (93%)
 Frame = +1

Query: 256 KGKPSTHEMQLKKIQSKIEQMEKANIEPKTWTMQGEVTAAKRPKNSALEVDLDFEHNVRP 435
           KG+ STHE QL+K+QS+IEQMEK+N+EPKTWTMQGEVTAA RPKNSALEVDLDFEHN+RP
Sbjct: 288 KGRLSTHEKQLQKLQSEIEQMEKSNLEPKTWTMQGEVTAASRPKNSALEVDLDFEHNMRP 347

Query: 436 APVITEEVTASIEDMIQKRIIEGHFNDVQRAPKLPSKAPREVKEL 570
           APVITEEVTA++EDMI+ RIIEG F+D+++AP L SKAPRE+KEL
Sbjct: 348 APVITEEVTATLEDMIKSRIIEGRFDDIRKAPSLHSKAPRELKEL 392


>ref|XP_004161358.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein MPP10-like
           [Cucumis sativus]
          Length = 420

 Score =  174 bits (441), Expect = 9e-42
 Identities = 82/101 (81%), Positives = 96/101 (95%)
 Frame = +1

Query: 268 STHEMQLKKIQSKIEQMEKANIEPKTWTMQGEVTAAKRPKNSALEVDLDFEHNVRPAPVI 447
           STH+ +LKK+QS+IE MEKAN+EPKTWTMQGEVTAAKRPKNSALEVDLDFEHNVRP PVI
Sbjct: 171 STHQKKLKKLQSEIEMMEKANLEPKTWTMQGEVTAAKRPKNSALEVDLDFEHNVRPPPVI 230

Query: 448 TEEVTASIEDMIQKRIIEGHFNDVQRAPKLPSKAPREVKEL 570
           TEEVTA++E+MIQKRI+EG F++VQ+APK P+KAPRE+KEL
Sbjct: 231 TEEVTATLEEMIQKRILEGRFDEVQKAPKRPTKAPREIKEL 271


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