BLASTX nr result

ID: Glycyrrhiza24_contig00020983 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00020983
         (968 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003537940.1| PREDICTED: uncharacterized protein LOC100782...   473   e-131
gb|AFK36558.1| unknown [Lotus japonicus]                              462   e-128
gb|ABK94599.1| unknown [Populus trichocarpa]                          426   e-117
ref|XP_002332721.1| predicted protein [Populus trichocarpa] gi|2...   422   e-116
ref|XP_002264803.2| PREDICTED: UPF0454 protein C12orf49 homolog ...   400   e-109

>ref|XP_003537940.1| PREDICTED: uncharacterized protein LOC100782588 [Glycine max]
          Length = 281

 Score =  473 bits (1217), Expect = e-131
 Identities = 219/249 (87%), Positives = 231/249 (92%)
 Frame = +2

Query: 188 VTAIRKDIGFQFIPLCKNTVQGRYSLSDDNGYVCNALSVDPKSRCCPQTGEKFSCHGCNL 367
           +TAIRKD+GFQ I  CK TVQGRY LSDDNGYVCNA SV+ +SRCCPQ GEKFSCHGCNL
Sbjct: 33  ITAIRKDVGFQIIHPCKTTVQGRYLLSDDNGYVCNAASVNSRSRCCPQRGEKFSCHGCNL 92

Query: 368 LSQCCNTYEYCVSCCLNPALTSKEHVLKTKIAKPSTARNYASVFDYCAGRCRHSSESVVH 547
           LSQCCN+YEYCVSCCLNPAL SKE VLK K+AKP+TAR Y+SVFDYCAGRCRHSSESVVH
Sbjct: 93  LSQCCNSYEYCVSCCLNPALISKEQVLKMKVAKPTTARTYSSVFDYCAGRCRHSSESVVH 152

Query: 548 ENAYLSDFHHCFSLPSNSSGANSTLTEARLNGINVVVGRQGESCNSVCKSRGQSCVPNKL 727
           ENAY+SDFHHCFSL SNSSG NSTLTEARL+GINVVVGRQGESCNSVCKSRGQSCVPNKL
Sbjct: 153 ENAYISDFHHCFSLSSNSSGKNSTLTEARLSGINVVVGRQGESCNSVCKSRGQSCVPNKL 212

Query: 728 VVLNHCDIIQKYMSCKGACLASVGTDQPAEVVYDAPKHLNPGSCLYTQTQSILSCDGSHQ 907
           VVLN CDIIQKYMSCKG+CLASVG DQPAEVVYDAP HLNPGSCLYT+TQSILSCDG HQ
Sbjct: 213 VVLNSCDIIQKYMSCKGSCLASVGADQPAEVVYDAPVHLNPGSCLYTETQSILSCDGLHQ 272

Query: 908 HTRRLCPCA 934
           HTRRLCPCA
Sbjct: 273 HTRRLCPCA 281


>gb|AFK36558.1| unknown [Lotus japonicus]
          Length = 272

 Score =  462 bits (1188), Expect = e-128
 Identities = 214/250 (85%), Positives = 231/250 (92%), Gaps = 1/250 (0%)
 Frame = +2

Query: 188 VTAIRKDIGFQ-FIPLCKNTVQGRYSLSDDNGYVCNALSVDPKSRCCPQTGEKFSCHGCN 364
           +TAIRKDIG Q  IP CK TVQGRY L+DDNG+VC+ALSVD  SRCCPQ+ EKFSCHGCN
Sbjct: 23  ITAIRKDIGLQSIIPTCKTTVQGRYHLTDDNGFVCSALSVDSMSRCCPQSREKFSCHGCN 82

Query: 365 LLSQCCNTYEYCVSCCLNPALTSKEHVLKTKIAKPSTARNYASVFDYCAGRCRHSSESVV 544
           +LSQCCN+YEYCVSCCLNPALTSKE VLK KI+KP TAR Y +VFDYCA RCRHSSESVV
Sbjct: 83  VLSQCCNSYEYCVSCCLNPALTSKEQVLKMKISKPVTARTYENVFDYCAARCRHSSESVV 142

Query: 545 HENAYLSDFHHCFSLPSNSSGANSTLTEARLNGINVVVGRQGESCNSVCKSRGQSCVPNK 724
           HENAYLSDFHHCFSLPSNSSG N TLTEARLNGINVVVGRQGESC+SVCK RGQSCVPNK
Sbjct: 143 HENAYLSDFHHCFSLPSNSSGTNVTLTEARLNGINVVVGRQGESCSSVCKLRGQSCVPNK 202

Query: 725 LVVLNHCDIIQKYMSCKGACLASVGTDQPAEVVYDAPKHLNPGSCLYTQTQSILSCDGSH 904
           LVVLN+CDIIQ+YMSCKG+CLASVGTDQPAEVVYDAPK LNPGSCLYT+T+S+LSCDGSH
Sbjct: 203 LVVLNNCDIIQRYMSCKGSCLASVGTDQPAEVVYDAPKDLNPGSCLYTETESVLSCDGSH 262

Query: 905 QHTRRLCPCA 934
           QHT+RLCPCA
Sbjct: 263 QHTKRLCPCA 272


>gb|ABK94599.1| unknown [Populus trichocarpa]
          Length = 268

 Score =  426 bits (1096), Expect = e-117
 Identities = 194/249 (77%), Positives = 221/249 (88%)
 Frame = +2

Query: 188 VTAIRKDIGFQFIPLCKNTVQGRYSLSDDNGYVCNALSVDPKSRCCPQTGEKFSCHGCNL 367
           ++AIRKDIGF+    C+NTVQGRY LSDDNGYVC+ALSVDP SRCCP+ G +FSC GCNL
Sbjct: 20  ISAIRKDIGFEQSRSCRNTVQGRYLLSDDNGYVCDALSVDPPSRCCPENGLRFSCQGCNL 79

Query: 368 LSQCCNTYEYCVSCCLNPALTSKEHVLKTKIAKPSTARNYASVFDYCAGRCRHSSESVVH 547
           +SQCCN+YE+CVSCCL+P+ T +  VLK KIAKPSTA +Y SVFD+CAGRCRH+SESVVH
Sbjct: 80  VSQCCNSYEFCVSCCLHPSRTQEAQVLKVKIAKPSTAVSYTSVFDFCAGRCRHNSESVVH 139

Query: 548 ENAYLSDFHHCFSLPSNSSGANSTLTEARLNGINVVVGRQGESCNSVCKSRGQSCVPNKL 727
           ENAY SDFHHCFSLPSNSSGAN T  EARL GINVV+G+QGESC+SVCKS GQSCV NKL
Sbjct: 140 ENAYRSDFHHCFSLPSNSSGANYTQLEARLGGINVVIGKQGESCDSVCKSNGQSCVLNKL 199

Query: 728 VVLNHCDIIQKYMSCKGACLASVGTDQPAEVVYDAPKHLNPGSCLYTQTQSILSCDGSHQ 907
           +VLN CD++QKYMSCKG CLAS+GTDQPAEVV DAP+HLNPG+CLYT+TQS+LSCDGS  
Sbjct: 200 LVLNQCDVMQKYMSCKGGCLASIGTDQPAEVVEDAPRHLNPGACLYTRTQSLLSCDGSLW 259

Query: 908 HTRRLCPCA 934
           HTRRLCPCA
Sbjct: 260 HTRRLCPCA 268


>ref|XP_002332721.1| predicted protein [Populus trichocarpa] gi|222832884|gb|EEE71361.1|
           predicted protein [Populus trichocarpa]
          Length = 245

 Score =  422 bits (1084), Expect = e-116
 Identities = 192/245 (78%), Positives = 217/245 (88%)
 Frame = +2

Query: 200 RKDIGFQFIPLCKNTVQGRYSLSDDNGYVCNALSVDPKSRCCPQTGEKFSCHGCNLLSQC 379
           RKDIGF+    C+NTVQGRY LSDDNGYVC+ALSVDP SRCCP+ G +FSC GCNL+SQC
Sbjct: 1   RKDIGFEQSRSCRNTVQGRYLLSDDNGYVCDALSVDPPSRCCPENGLRFSCQGCNLVSQC 60

Query: 380 CNTYEYCVSCCLNPALTSKEHVLKTKIAKPSTARNYASVFDYCAGRCRHSSESVVHENAY 559
           CN+YE+CVSCCL+P+ T +  VLK KIAKPSTA +Y SVFD+CAGRCRH+SESVVHENAY
Sbjct: 61  CNSYEFCVSCCLHPSRTQEAQVLKVKIAKPSTAVSYTSVFDFCAGRCRHNSESVVHENAY 120

Query: 560 LSDFHHCFSLPSNSSGANSTLTEARLNGINVVVGRQGESCNSVCKSRGQSCVPNKLVVLN 739
            SDFHHCFSLPSNSSGAN T  EARL GINVV+G+QGESC+SVCKS GQSCV NKL+VLN
Sbjct: 121 RSDFHHCFSLPSNSSGANYTQLEARLGGINVVIGKQGESCDSVCKSNGQSCVLNKLLVLN 180

Query: 740 HCDIIQKYMSCKGACLASVGTDQPAEVVYDAPKHLNPGSCLYTQTQSILSCDGSHQHTRR 919
            CD++QKYMSCKG CLAS+GTDQPAEVV DAP+HLNPG+CLYT+TQS+LSCDGS  HTRR
Sbjct: 181 QCDVMQKYMSCKGGCLASIGTDQPAEVVEDAPRHLNPGACLYTRTQSLLSCDGSLWHTRR 240

Query: 920 LCPCA 934
           LCPCA
Sbjct: 241 LCPCA 245


>ref|XP_002264803.2| PREDICTED: UPF0454 protein C12orf49 homolog [Vitis vinifera]
          Length = 279

 Score =  400 bits (1028), Expect = e-109
 Identities = 187/250 (74%), Positives = 213/250 (85%), Gaps = 1/250 (0%)
 Frame = +2

Query: 188 VTAIRKDIGFQFIPLCKNTVQGRYSLSDDNGYVCNALSVDPKSRCCPQTGEKFSCHGCNL 367
           V+AIRKD       +C+ TVQGRY  +DDNG+VC+ALS+DP+S CC    E+FSCHGCNL
Sbjct: 30  VSAIRKDPNLLEKRICRTTVQGRYLRTDDNGHVCDALSMDPQSGCCFGKREQFSCHGCNL 89

Query: 368 LSQCCNTYEYCVSCCLNPALTSKEHVLKTKIAKPSTARNYASVFDYCAGRCRHSSESVVH 547
           +SQCCN+YE+CVSCCLNPA T KE  LK K+AKP TA  YASVFD+C GRCRH+SESVVH
Sbjct: 90  ISQCCNSYEFCVSCCLNPARTQKELALKVKMAKPVTAGAYASVFDFCTGRCRHNSESVVH 149

Query: 548 ENAYLSDFHHCFSLPSNS-SGANSTLTEARLNGINVVVGRQGESCNSVCKSRGQSCVPNK 724
           ENAYLSDFHHCFSLPSNS +G      E RLNGI+VVVGRQGESC+SVCKS GQSCVP+K
Sbjct: 150 ENAYLSDFHHCFSLPSNSTAGGVDRNPELRLNGIHVVVGRQGESCDSVCKSNGQSCVPSK 209

Query: 725 LVVLNHCDIIQKYMSCKGACLASVGTDQPAEVVYDAPKHLNPGSCLYTQTQSILSCDGSH 904
           L VLN C+I+QKYMSCKGACLAS+G DQPAEVV DAP+HLNPG+CLYT+TQ+ILSCDGSH
Sbjct: 210 LSVLNQCEIMQKYMSCKGACLASIGADQPAEVVDDAPRHLNPGACLYTRTQTILSCDGSH 269

Query: 905 QHTRRLCPCA 934
           QHTRRLCPCA
Sbjct: 270 QHTRRLCPCA 279


Top