BLASTX nr result

ID: Glycyrrhiza24_contig00020956 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00020956
         (513 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541444.1| PREDICTED: protein ROS1-like [Glycine max]        231   5e-59
ref|XP_003537037.1| PREDICTED: uncharacterized protein LOC100806...   219   2e-55
ref|XP_003520681.1| PREDICTED: protein ROS1-like [Glycine max]        147   1e-33
gb|AEC12446.1| repressor of gene silencing 1 [Gossypium hirsutum]      97   1e-18
ref|XP_002277401.1| PREDICTED: transcriptional activator DEMETER...    69   3e-10

>ref|XP_003541444.1| PREDICTED: protein ROS1-like [Glycine max]
          Length = 1881

 Score =  231 bits (589), Expect = 5e-59
 Identities = 123/171 (71%), Positives = 133/171 (77%), Gaps = 1/171 (0%)
 Frame = +2

Query: 2    SDHLSSSAFMSLAARFPKKLSSSCETYHGEGTSLVVDKQEVHIVEPEENTEWDVKLLKQS 181
            +DHLSSSAFMSLAARFPK  SS C+T+H E T LVV+K +VHIVEPEE+TEWDVKLL QS
Sbjct: 901  TDHLSSSAFMSLAARFPKISSSMCKTHHAEDTRLVVNKPQVHIVEPEESTEWDVKLLNQS 960

Query: 182  VYDQGSMTVDIVEHSGEK-TVNSNDSCRITSSVISLKDESDCRLSEPSQINIKEHHSPMR 358
            VYDQ S T+DIVEHS EK   NSN+SC  TSSVISL DES+ RLSE  Q NIKEH SPMR
Sbjct: 961  VYDQPSPTIDIVEHSREKEAFNSNESCGTTSSVISLTDESNSRLSELPQKNIKEHCSPMR 1020

Query: 359  SGLISAMIEEGEEKSCYDDARKELNDIXXXXXXXXXXXXXGDFSNDQNPEK 511
            SGL+SA IEEGEEKSCYD  RKELNDI             GDFSNDQNPEK
Sbjct: 1021 SGLLSASIEEGEEKSCYDGDRKELNDIVSSQGSVISSQISGDFSNDQNPEK 1071


>ref|XP_003537037.1| PREDICTED: uncharacterized protein LOC100806794 [Glycine max]
          Length = 1903

 Score =  219 bits (557), Expect = 2e-55
 Identities = 117/171 (68%), Positives = 131/171 (76%), Gaps = 1/171 (0%)
 Frame = +2

Query: 2    SDHLSSSAFMSLAARFPKKLSSSCETYHGEGTSLVVDKQEVHIVEPEENTEWDVKLLKQS 181
            +DHLSSSAFMSLAARFPK  SS C+ +H E T LVV++ +VHIVEPEE+TEWDVKLL QS
Sbjct: 979  TDHLSSSAFMSLAARFPKNSSSMCKRHHKEDTRLVVNEPQVHIVEPEESTEWDVKLLNQS 1038

Query: 182  VYDQGSMTVDIVEHSGEK-TVNSNDSCRITSSVISLKDESDCRLSEPSQINIKEHHSPMR 358
            VYDQ S T+D+ EHSGEK  VNSN+SC   SSVISL DES+ RLSE  Q NIKEH SP R
Sbjct: 1039 VYDQTS-TIDMAEHSGEKEAVNSNESCGTPSSVISLTDESNSRLSELPQKNIKEHCSPTR 1097

Query: 359  SGLISAMIEEGEEKSCYDDARKELNDIXXXXXXXXXXXXXGDFSNDQNPEK 511
            SG++SA IEEGEEKSCY+  RKELNDI             GDFSNDQNPEK
Sbjct: 1098 SGILSATIEEGEEKSCYNGDRKELNDIVSSQGSVFSSQISGDFSNDQNPEK 1148


>ref|XP_003520681.1| PREDICTED: protein ROS1-like [Glycine max]
          Length = 1764

 Score =  147 bits (370), Expect = 1e-33
 Identities = 84/171 (49%), Positives = 110/171 (64%), Gaps = 1/171 (0%)
 Frame = +2

Query: 2    SDHLSSSAFMSLAARFPKKLSSSCETYHGEGTSLVVDKQEVHIVEPEENTEWDVKLLKQS 181
            SDHLSSSAFMSLAARFP + SS+ +T   E TSLV+++ +V IVEPEEN + D K+  QS
Sbjct: 799  SDHLSSSAFMSLAARFPLRSSSNYKTCPEESTSLVINEPQVIIVEPEENEKLDEKISDQS 858

Query: 182  VYDQGSMTVDIVEHSGEK-TVNSNDSCRITSSVISLKDESDCRLSEPSQINIKEHHSPMR 358
            V +  SMT+DI+EHS E+  V+ N+SCR    +I + DES+ +L E +Q +  E HSP+ 
Sbjct: 859  VCELNSMTIDIIEHSEEREVVDRNNSCRTNGGLIGVADESNSKLLESAQRHNSE-HSPVE 917

Query: 359  SGLISAMIEEGEEKSCYDDARKELNDIXXXXXXXXXXXXXGDFSNDQNPEK 511
            SG ISA+  EG +  C+    KELN +             G FS DQNPEK
Sbjct: 918  SGAISAVTGEGPKNLCHGSLGKELNGVFSSQCSAITSQISGGFSIDQNPEK 968


>gb|AEC12446.1| repressor of gene silencing 1 [Gossypium hirsutum]
          Length = 1758

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 67/171 (39%), Positives = 90/171 (52%), Gaps = 1/171 (0%)
 Frame = +2

Query: 2    SDHLSSSAFMSLAARFPKKLSSSCETYHGEGTSLVVDKQEVHIVEPEENTEWDVKLLKQS 181
            SDHLSSSAFMSLAARFP K  S  + YH EGTSL V+ +E +++EPEE+ +WD K   Q 
Sbjct: 763  SDHLSSSAFMSLAARFPIKSKSKDKLYHQEGTSL-VNGEEFYVLEPEESIKWDAKTAIQP 821

Query: 182  VYDQGSMTVDIVEHSGEKTV-NSNDSCRITSSVISLKDESDCRLSEPSQINIKEHHSPMR 358
            V DQ SMTVD  + S EK V NS +    +++ +S  +E  C L   S   +  +     
Sbjct: 822  VGDQSSMTVDGYQDSEEKEVANSEELSGSSTATVSSINEPKCNLLNSSGSGLSTYCDSTA 881

Query: 359  SGLISAMIEEGEEKSCYDDARKELNDIXXXXXXXXXXXXXGDFSNDQNPEK 511
            + L    I    +  C+    +E ND+             GDFS  Q  E+
Sbjct: 882  NRLNMETIR--GKTDCF-KGDEETNDVLSSQNSVVSSENSGDFSLVQTAER 929


>ref|XP_002277401.1| PREDICTED: transcriptional activator DEMETER-like [Vitis vinifera]
          Length = 1942

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 54/158 (34%), Positives = 77/158 (48%), Gaps = 12/158 (7%)
 Frame = +2

Query: 2    SDHLSSSAFMSLAARFPKKLSSSCETYHGEGTSL----VVDKQEVHIVEPEENTEWDVKL 169
            SDHLSSSAFMSLAA FP      C+  H   T L    +V++ EV  + PE+   W+ K+
Sbjct: 967  SDHLSSSAFMSLAAHFP------CKCNHRPSTELETRILVEEPEVCTLNPEDTVTWNEKM 1020

Query: 170  LKQSVYDQGSMTVDIVEHSGEKTVNSNDSCRITSSVISLKDESDCRLSEPSQINIKEHHS 349
              Q+V DQ SMT+    H  E+ VNSN S   +   +   D S  ++ + +   +    S
Sbjct: 1021 SNQAVCDQSSMTL----HHTEEAVNSNGSYGNSRGTVGTVDISKDKMLDSTGKKMSNKSS 1076

Query: 350  PMRSGLISAMIEEGEEKSCY--------DDARKELNDI 439
               +G  + MI  G E +C+        DDA    N +
Sbjct: 1077 V--NGTTTQMI--GTELACFIGGDRTAADDAASSQNSL 1110


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