BLASTX nr result

ID: Glycyrrhiza24_contig00020955 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00020955
         (521 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003516776.1| PREDICTED: uncharacterized protein LOC100780...   265   3e-69
ref|XP_003636002.1| Gamma-tubulin complex component [Medicago tr...   250   7e-65

>ref|XP_003516776.1| PREDICTED: uncharacterized protein LOC100780017 [Glycine max]
          Length = 1179

 Score =  265 bits (677), Expect = 3e-69
 Identities = 128/173 (73%), Positives = 143/173 (82%)
 Frame = -3

Query: 519  CPIVGQQNHLSALSFLKSSTLNSSIQSSCHHEKSGSDSHGICDKMDAIDHMVKSSHEGMV 340
            CP+VGQQNHLSALSFLKSSTLN+SIQ+SCHHE SGSDSHGICDKMDA D ++K+SHE ++
Sbjct: 498  CPVVGQQNHLSALSFLKSSTLNNSIQNSCHHESSGSDSHGICDKMDATDVLMKTSHEVVI 557

Query: 339  SSHMSDPLNPGNSSCSCKFSIQYRDSCITSYSAISHLLKKSFDDDGTVEKEVTEKHLQSL 160
            SSHMS+PLNP NSSC CKFSIQ R+S I S S + H LKKSFD+DGTVE +VTEKHL  L
Sbjct: 558  SSHMSNPLNPENSSCLCKFSIQDRESLIDSCSGMGHFLKKSFDNDGTVEPKVTEKHLGPL 617

Query: 159  KYSKLCHDVIAIGDTLSGEILTEDQPDNNTLASSLCAFQPLKVGHQCNIPSIN 1
            KYS LCHD+  I +TLSGE   EDQPDNNTL S L  FQP K GHQCN PSIN
Sbjct: 618  KYSMLCHDINTISNTLSGEATKEDQPDNNTLTSHLYGFQPQKYGHQCNHPSIN 670


>ref|XP_003636002.1| Gamma-tubulin complex component [Medicago truncatula]
            gi|355501937|gb|AES83140.1| Gamma-tubulin complex
            component [Medicago truncatula]
          Length = 1206

 Score =  250 bits (639), Expect = 7e-65
 Identities = 124/173 (71%), Positives = 144/173 (83%)
 Frame = -3

Query: 519  CPIVGQQNHLSALSFLKSSTLNSSIQSSCHHEKSGSDSHGICDKMDAIDHMVKSSHEGMV 340
            CP  GQQNHLSALSFLK +TLNSSIQ+S HHEK GSDSH ICDKMDA+DH++KSS++GM+
Sbjct: 500  CPAAGQQNHLSALSFLKFTTLNSSIQNSRHHEKPGSDSHEICDKMDAVDHLMKSSNKGMI 559

Query: 339  SSHMSDPLNPGNSSCSCKFSIQYRDSCITSYSAISHLLKKSFDDDGTVEKEVTEKHLQSL 160
            SSHM DP NP NS  S KFSI+ R SCI SYSA+  LLKKSFD DGTVE+++TEKHLQS+
Sbjct: 560  SSHMFDPQNPENSWYSSKFSIEQRGSCIDSYSAMDDLLKKSFDADGTVEQKMTEKHLQSM 619

Query: 159  KYSKLCHDVIAIGDTLSGEILTEDQPDNNTLASSLCAFQPLKVGHQCNIPSIN 1
            KYS+LC   +A+ D+LS E L+EDQP NNT AS LC FQPLKV HQCN+PSIN
Sbjct: 620  KYSQLCR--VAVSDSLSVETLSEDQPVNNTPASFLCDFQPLKVDHQCNLPSIN 670


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