BLASTX nr result

ID: Glycyrrhiza24_contig00020953 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00020953
         (487 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004168767.1| PREDICTED: ribosome biogenesis protein NSA2 ...   199   2e-49
gb|AFK39276.1| unknown [Lotus japonicus]                              198   3e-49
ref|XP_002266163.1| PREDICTED: ribosome biogenesis protein NSA2 ...   198   3e-49
ref|XP_002533899.1| TGF-beta-inducible nuclear protein, putative...   198   3e-49
emb|CBI22790.3| unnamed protein product [Vitis vinifera]              198   3e-49

>ref|XP_004168767.1| PREDICTED: ribosome biogenesis protein NSA2 homolog [Cucumis
           sativus]
          Length = 260

 Score =  199 bits (507), Expect = 2e-49
 Identities = 96/98 (97%), Positives = 96/98 (97%)
 Frame = -2

Query: 486 KPPKYERFIRPSGLRFTKAHVTHPELKCTFNLEIIGVKKNPNGPMYTSLVVMTKGTIIEV 307
           KPPKYERFIRPSGLRFTKAHVTHPELKCTFNLEIIGVKKNPNGPMYTSL VMTKG IIEV
Sbjct: 163 KPPKYERFIRPSGLRFTKAHVTHPELKCTFNLEIIGVKKNPNGPMYTSLGVMTKGAIIEV 222

Query: 306 NVSELGLVTPAGKVVWGKYAQVTNNPENDGCINAVLLV 193
           NVSELGLVTPAGKVVWGKYAQVTNNPENDGCINAVLLV
Sbjct: 223 NVSELGLVTPAGKVVWGKYAQVTNNPENDGCINAVLLV 260


>gb|AFK39276.1| unknown [Lotus japonicus]
          Length = 260

 Score =  198 bits (504), Expect = 3e-49
 Identities = 95/98 (96%), Positives = 96/98 (97%)
 Frame = -2

Query: 486 KPPKYERFIRPSGLRFTKAHVTHPELKCTFNLEIIGVKKNPNGPMYTSLVVMTKGTIIEV 307
           KPPKYERFIRP+GLRFTKAHVTHPELKCTFNLEIIGVKKNPNGPMYTSL VMTKGTIIEV
Sbjct: 163 KPPKYERFIRPTGLRFTKAHVTHPELKCTFNLEIIGVKKNPNGPMYTSLGVMTKGTIIEV 222

Query: 306 NVSELGLVTPAGKVVWGKYAQVTNNPENDGCINAVLLV 193
           N SELGLVTPAGKVVWGKYAQVTNNPENDGCINAVLLV
Sbjct: 223 NCSELGLVTPAGKVVWGKYAQVTNNPENDGCINAVLLV 260


>ref|XP_002266163.1| PREDICTED: ribosome biogenesis protein NSA2 homolog [Vitis
           vinifera]
          Length = 260

 Score =  198 bits (504), Expect = 3e-49
 Identities = 96/98 (97%), Positives = 96/98 (97%)
 Frame = -2

Query: 486 KPPKYERFIRPSGLRFTKAHVTHPELKCTFNLEIIGVKKNPNGPMYTSLVVMTKGTIIEV 307
           KPPKYERFIRPSGLRFTKAHVTHPELKCTFNLEIIGVKKNPNG MYTSL VMTKGTIIEV
Sbjct: 163 KPPKYERFIRPSGLRFTKAHVTHPELKCTFNLEIIGVKKNPNGQMYTSLGVMTKGTIIEV 222

Query: 306 NVSELGLVTPAGKVVWGKYAQVTNNPENDGCINAVLLV 193
           NVSELGLVTPAGKVVWGKYAQVTNNPENDGCINAVLLV
Sbjct: 223 NVSELGLVTPAGKVVWGKYAQVTNNPENDGCINAVLLV 260


>ref|XP_002533899.1| TGF-beta-inducible nuclear protein, putative [Ricinus communis]
           gi|223526141|gb|EEF28481.1| TGF-beta-inducible nuclear
           protein, putative [Ricinus communis]
          Length = 260

 Score =  198 bits (504), Expect = 3e-49
 Identities = 95/98 (96%), Positives = 97/98 (98%)
 Frame = -2

Query: 486 KPPKYERFIRPSGLRFTKAHVTHPELKCTFNLEIIGVKKNPNGPMYTSLVVMTKGTIIEV 307
           KPPKYERFIRPSGLRFTKAHVTHPELKCTFNLEIIGVKKNPNGPMYTSL V+TKG+IIEV
Sbjct: 163 KPPKYERFIRPSGLRFTKAHVTHPELKCTFNLEIIGVKKNPNGPMYTSLGVITKGSIIEV 222

Query: 306 NVSELGLVTPAGKVVWGKYAQVTNNPENDGCINAVLLV 193
           NVSELGLVTPAGKVVWGKYAQVTNNPENDGCINAVLLV
Sbjct: 223 NVSELGLVTPAGKVVWGKYAQVTNNPENDGCINAVLLV 260


>emb|CBI22790.3| unnamed protein product [Vitis vinifera]
          Length = 280

 Score =  198 bits (504), Expect = 3e-49
 Identities = 96/98 (97%), Positives = 96/98 (97%)
 Frame = -2

Query: 486 KPPKYERFIRPSGLRFTKAHVTHPELKCTFNLEIIGVKKNPNGPMYTSLVVMTKGTIIEV 307
           KPPKYERFIRPSGLRFTKAHVTHPELKCTFNLEIIGVKKNPNG MYTSL VMTKGTIIEV
Sbjct: 183 KPPKYERFIRPSGLRFTKAHVTHPELKCTFNLEIIGVKKNPNGQMYTSLGVMTKGTIIEV 242

Query: 306 NVSELGLVTPAGKVVWGKYAQVTNNPENDGCINAVLLV 193
           NVSELGLVTPAGKVVWGKYAQVTNNPENDGCINAVLLV
Sbjct: 243 NVSELGLVTPAGKVVWGKYAQVTNNPENDGCINAVLLV 280


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