BLASTX nr result

ID: Glycyrrhiza24_contig00020948 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00020948
         (439 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003553607.1| PREDICTED: probable F-box protein At1g60180-...    75   5e-12
ref|XP_003520705.1| PREDICTED: F-box protein At3g44326-like [Gly...    69   4e-10
ref|XP_002273038.1| PREDICTED: F-box protein At2g27310-like [Vit...    69   5e-10
ref|XP_004149218.1| PREDICTED: probable F-box protein At1g60180-...    68   7e-10
ref|XP_004161239.1| PREDICTED: probable F-box protein At1g60180-...    67   2e-09

>ref|XP_003553607.1| PREDICTED: probable F-box protein At1g60180-like [Glycine max]
          Length = 335

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 47/81 (58%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
 Frame = -3

Query: 434 RFATVVGGGEKVTAAEVVLCSVVVTWGGXXXXXXXXXXXXXXVSLRVEDMDGKQFNGRDS 255
           RFATVVGGGE+ TA EV LCSV VT+GG                L++EDMDG   NGRDS
Sbjct: 214 RFATVVGGGERGTAVEVALCSVTVTFGG--------EMQVREACLQMEDMDGMFLNGRDS 265

Query: 254 LVILQRALEGGRNGNCK-GKE 195
           L ILQRALEG R    K GKE
Sbjct: 266 LGILQRALEGIRGTLLKDGKE 286


>ref|XP_003520705.1| PREDICTED: F-box protein At3g44326-like [Glycine max]
          Length = 335

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 44/82 (53%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
 Frame = -3

Query: 437 VRFATVVGGGEKVTAAEVVLCSVVVTWGGXXXXXXXXXXXXXXVSLRVEDMDGKQFNGRD 258
           VRFATVV GGE+ T AEV LCSV VT+G                 L++EDMDG   NGR+
Sbjct: 214 VRFATVVDGGERGTPAEVALCSVTVTFGN--------EMQVREACLQMEDMDGMFLNGRE 265

Query: 257 SLVILQRALEGGRNGNCK-GKE 195
           SL IL+RALEG R    K GKE
Sbjct: 266 SLGILKRALEGKRGTLLKDGKE 287


>ref|XP_002273038.1| PREDICTED: F-box protein At2g27310-like [Vitis vinifera]
          Length = 336

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 44/115 (38%), Positives = 59/115 (51%), Gaps = 2/115 (1%)
 Frame = -3

Query: 437 VRFATVVGGGEKVTAAEVVLCSVVVTWGGXXXXXXXXXXXXXXVSLRVEDMDGKQFNGRD 258
           VR+ATVVGG ++   +EVV C +VVT  G               +L+VEDM+G+  NG++
Sbjct: 213 VRYATVVGG-DRTVGSEVVQCGIVVTCAGKEGGEMQVREV----NLQVEDMEGRHLNGKE 267

Query: 257 SLVILQRALEGGRNGNCKGKE--YCYGXXXXXXXXXXXXXXXXXXKLDMLCLCVG 99
           SLVILQ ALE GR    KG+E    Y                    LDM+C+ +G
Sbjct: 268 SLVILQEALENGRRKKAKGEEGKARYERYLEMMGERRERRLRREKTLDMVCIALG 322


>ref|XP_004149218.1| PREDICTED: probable F-box protein At1g60180-like [Cucumis sativus]
          Length = 347

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 49/120 (40%), Positives = 60/120 (50%), Gaps = 2/120 (1%)
 Frame = -3

Query: 437 VRFATVVGGGEKVTAAEVVLCSVVVTWGGXXXXXXXXXXXXXXVSLRVEDMDGKQFNGRD 258
           V F TV+GG EK TAAE V C + VT GG               +L+VEDMDG   +G+D
Sbjct: 229 VEFGTVLGG-EKGTAAEWVKCGIAVTCGGWEGGNLQVREV----NLQVEDMDGTFLDGKD 283

Query: 257 SLVILQRALEG--GRNGNCKGKEYCYGXXXXXXXXXXXXXXXXXXKLDMLCLCVGFAGIA 84
           SLVIL+RA+EG  GR G  +  E+                      LDM+CL  GF G A
Sbjct: 284 SLVILERAMEGKKGRKGRKRLNEF-----MEKKRERKEMKVRREGTLDMMCLAFGFFGFA 338


>ref|XP_004161239.1| PREDICTED: probable F-box protein At1g60180-like [Cucumis sativus]
          Length = 347

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 48/120 (40%), Positives = 60/120 (50%), Gaps = 2/120 (1%)
 Frame = -3

Query: 437 VRFATVVGGGEKVTAAEVVLCSVVVTWGGXXXXXXXXXXXXXXVSLRVEDMDGKQFNGRD 258
           V F TV+GG EK TAAE V C + VT GG               +L+VEDMDG   +G++
Sbjct: 229 VEFGTVLGG-EKGTAAEWVKCGIAVTCGGWEGGNLQVREV----NLQVEDMDGTFLDGKE 283

Query: 257 SLVILQRALEG--GRNGNCKGKEYCYGXXXXXXXXXXXXXXXXXXKLDMLCLCVGFAGIA 84
           SLVIL+RA+EG  GR G  +  E+                      LDM+CL  GF G A
Sbjct: 284 SLVILERAMEGKKGRKGRKRLNEF-----MEKKRERKEMKVRREGTLDMMCLAFGFFGFA 338


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