BLASTX nr result

ID: Glycyrrhiza24_contig00020946 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00020946
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003609163.1| hypothetical protein MTR_4g112660 [Medicago ...   104   7e-21
ref|XP_003529045.1| PREDICTED: UPF0481 protein At3g47200-like [G...   100   2e-19
ref|XP_003520436.1| PREDICTED: UPF0481 protein At3g47200-like [G...    80   2e-13
ref|XP_003520438.1| PREDICTED: putative UPF0481 protein At3g0264...    72   5e-11
gb|ACU17730.1| unknown [Glycine max]                                   72   5e-11

>ref|XP_003609163.1| hypothetical protein MTR_4g112660 [Medicago truncatula]
           gi|355510218|gb|AES91360.1| hypothetical protein
           MTR_4g112660 [Medicago truncatula]
          Length = 363

 Score =  104 bits (260), Expect = 7e-21
 Identities = 56/100 (56%), Positives = 69/100 (69%)
 Frame = +2

Query: 20  RRDNVGKNSSPTSTREETNNRVGFTELAFNYFEDYYPHKSSQKILERIQIQNYKSCKHFT 199
           +R  +G+ +   S +E   N + F +LAFNYFEDYYP K S+K+      QN KSCKHF 
Sbjct: 107 KRVLLGEKNGCNSNKE---NCLSFIDLAFNYFEDYYPQKLSKKLE---LTQNCKSCKHFA 160

Query: 200 DLIRYTYLPGEIQEKGVNPSQNFTSCPAEYVPRTATKLNE 319
           DLIRYTYLP EIQ  G+NPSQ+FT   +EY  RTATKL+E
Sbjct: 161 DLIRYTYLPREIQVNGMNPSQSFTPFRSEYALRTATKLSE 200


>ref|XP_003529045.1| PREDICTED: UPF0481 protein At3g47200-like [Glycine max]
          Length = 464

 Score =  100 bits (248), Expect = 2e-19
 Identities = 52/84 (61%), Positives = 62/84 (73%), Gaps = 2/84 (2%)
 Frame = +2

Query: 74  NNRVGFTELAFNYFEDYYPHKSSQKILERIQIQNYKSCKHFTDLIRYTYLPGEIQEKGVN 253
           +N V F +LAFNYFEDY+ HK S K+     I+N KSCKHFTDLIR+TYLP + Q +GVN
Sbjct: 194 DNSVKFVQLAFNYFEDYFSHKPSFKVE---MIKNCKSCKHFTDLIRFTYLPTKFQIEGVN 250

Query: 254 --PSQNFTSCPAEYVPRTATKLNE 319
             PS++FT C  E V RTATKLNE
Sbjct: 251 VSPSRHFTPCQVECVLRTATKLNE 274


>ref|XP_003520436.1| PREDICTED: UPF0481 protein At3g47200-like [Glycine max]
          Length = 470

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 47/89 (52%), Positives = 57/89 (64%), Gaps = 8/89 (8%)
 Frame = +2

Query: 77  NRVGFTELAFNYFEDYYP--HKSS-----QKILERIQIQNYKSCKHFTDLIRYTYLPGEI 235
           N V F ELAFNYFEDYYP  HKS+      +  E ++ +N+KSC HFTDLIR  YLP  +
Sbjct: 192 NGVSFLELAFNYFEDYYPYPHKSTTTSDYDQTKEMVK-KNFKSCNHFTDLIRLFYLPERV 250

Query: 236 QEKGVNPSQNFTSC-PAEYVPRTATKLNE 319
             K   PS++FT C   E V +TA KLNE
Sbjct: 251 HVKEWMPSKHFTPCGKNECVLKTAAKLNE 279


>ref|XP_003520438.1| PREDICTED: putative UPF0481 protein At3g02645-like [Glycine max]
          Length = 247

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 37/56 (66%), Positives = 42/56 (75%), Gaps = 5/56 (8%)
 Frame = +2

Query: 167 IQNYKSCKHFTDLIRYTYLPGEIQEKG-----VNPSQNFTSCPAEYVPRTATKLNE 319
           I+  KSCKHFTDLIRYT+LP +IQ +G     VNPSQ+FT C  E V RTATKLNE
Sbjct: 2   IKKCKSCKHFTDLIRYTFLPTKIQVEGVNNVSVNPSQHFTPCQVECVLRTATKLNE 57


>gb|ACU17730.1| unknown [Glycine max]
          Length = 244

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 36/53 (67%), Positives = 42/53 (79%), Gaps = 2/53 (3%)
 Frame = +2

Query: 167 IQNYKSCKHFTDLIRYTYLPGEIQEKGVN--PSQNFTSCPAEYVPRTATKLNE 319
           I+N KSCKHFTDLIR+TYLP + Q +GVN  PS++FT C  E V RTATKLNE
Sbjct: 2   IKNCKSCKHFTDLIRFTYLPTKFQIEGVNVSPSRHFTPCQVECVLRTATKLNE 54


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