BLASTX nr result

ID: Glycyrrhiza24_contig00020928 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00020928
         (222 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003543466.1| PREDICTED: uncharacterized protein LOC100805...    87   1e-15
ref|XP_003547043.1| PREDICTED: uncharacterized protein LOC100796...    79   4e-13
ref|XP_003597140.1| CCR4-NOT transcription complex subunit [Medi...    78   9e-13
ref|XP_003539106.1| PREDICTED: uncharacterized protein LOC100813...    71   1e-10
ref|XP_003539741.1| PREDICTED: uncharacterized protein LOC100801...    69   3e-10

>ref|XP_003543466.1| PREDICTED: uncharacterized protein LOC100805811 [Glycine max]
          Length = 1003

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 40/52 (76%), Positives = 45/52 (86%)
 Frame = +1

Query: 67  ALPSAAWGTRATNCQPAAGGLLCPNGLSKPKPDSISCSLPFSSAVVGTVHSS 222
           AL + AWGTRATNCQPAA GLLCPNGLS+PKPD+IS SLPFSSAV  T+ +S
Sbjct: 300 ALSAVAWGTRATNCQPAADGLLCPNGLSRPKPDTISSSLPFSSAVACTIQAS 351


>ref|XP_003547043.1| PREDICTED: uncharacterized protein LOC100796804 [Glycine max]
          Length = 1045

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 37/49 (75%), Positives = 42/49 (85%)
 Frame = +1

Query: 76  SAAWGTRATNCQPAAGGLLCPNGLSKPKPDSISCSLPFSSAVVGTVHSS 222
           +AAWG RATNCQPAA GLLCPNGLSK KPD+IS +LPFSSAV  T+ +S
Sbjct: 320 AAAWGIRATNCQPAACGLLCPNGLSKLKPDTISSTLPFSSAVACTIQAS 368


>ref|XP_003597140.1| CCR4-NOT transcription complex subunit [Medicago truncatula]
           gi|355486188|gb|AES67391.1| CCR4-NOT transcription
           complex subunit [Medicago truncatula]
          Length = 1007

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 39/50 (78%), Positives = 40/50 (80%)
 Frame = +1

Query: 73  PSAAWGTRATNCQPAAGGLLCPNGLSKPKPDSISCSLPFSSAVVGTVHSS 222
           P AAWG RATNCQPAAGG   P GLSKPKPDSIS +LPFSSAV GTV  S
Sbjct: 301 PHAAWGLRATNCQPAAGG---PTGLSKPKPDSISSTLPFSSAVAGTVQVS 347


>ref|XP_003539106.1| PREDICTED: uncharacterized protein LOC100813427 [Glycine max]
          Length = 1023

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 35/53 (66%), Positives = 42/53 (79%), Gaps = 1/53 (1%)
 Frame = +1

Query: 67  ALP-SAAWGTRATNCQPAAGGLLCPNGLSKPKPDSISCSLPFSSAVVGTVHSS 222
           ALP SAAWGT+ TNCQP AGGL  PNG SKPKPD+ S +L FS+AV G++ +S
Sbjct: 299 ALPTSAAWGTQVTNCQPPAGGLSYPNGPSKPKPDTGSSTLVFSAAVTGSIQAS 351


>ref|XP_003539741.1| PREDICTED: uncharacterized protein LOC100801880 [Glycine max]
          Length = 1022

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 34/53 (64%), Positives = 42/53 (79%), Gaps = 1/53 (1%)
 Frame = +1

Query: 67  ALP-SAAWGTRATNCQPAAGGLLCPNGLSKPKPDSISCSLPFSSAVVGTVHSS 222
           ALP SAAWGT+A+NCQP AGGL  PNG SKPKPD+   +L FS+AV G++ +S
Sbjct: 300 ALPASAAWGTQASNCQPPAGGLSYPNGPSKPKPDTGCSTLAFSAAVTGSIQAS 352


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