BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00020923
         (612 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548683.1| PREDICTED: U2 snRNP-associated SURP motif-co...   172   3e-41
ref|XP_003531944.1| PREDICTED: U2 snRNP-associated SURP motif-co...   172   3e-41
ref|XP_003628951.1| U2-associated protein SR140 [Medicago trunca...   163   3e-38
ref|XP_002308714.1| predicted protein [Populus trichocarpa] gi|2...   160   1e-37
ref|XP_002515412.1| RNA binding protein, putative [Ricinus commu...   160   2e-37

>ref|XP_003548683.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein-like
           [Glycine max]
          Length = 971

 Score =  172 bits (437), Expect = 3e-41
 Identities = 86/109 (78%), Positives = 88/109 (80%)
 Frame = +3

Query: 285 MSSFSITRKKTPFQKHXXXXXXXXXXXXXXXXXLYAEFVESFQGDITPGSKAFVRGGTIN 464
           MSSFSITRKKTPFQKH                 LYAEFVESFQGD TPGSK FVRGGTIN
Sbjct: 1   MSSFSITRKKTPFQKHREEEEAKKKRAEDETARLYAEFVESFQGDTTPGSKTFVRGGTIN 60

Query: 465 PNEKVKDDFEGEKSKDGVSGPKKGSRYVPSFIPPPLATKGKESERKKEE 611
           PN+K KDD EGEKSKDGVSGPKKGSRYVPSFIPPP+ATKGKESERKKEE
Sbjct: 61  PNDKFKDDSEGEKSKDGVSGPKKGSRYVPSFIPPPMATKGKESERKKEE 109


>ref|XP_003531944.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein-like
           [Glycine max]
          Length = 972

 Score =  172 bits (437), Expect = 3e-41
 Identities = 86/109 (78%), Positives = 88/109 (80%)
 Frame = +3

Query: 285 MSSFSITRKKTPFQKHXXXXXXXXXXXXXXXXXLYAEFVESFQGDITPGSKAFVRGGTIN 464
           MSSFSITRKKTPFQKH                 LYAEFVESFQGD TPGSK FVRGGTIN
Sbjct: 1   MSSFSITRKKTPFQKHREEEEAKKKRAEDETARLYAEFVESFQGDTTPGSKTFVRGGTIN 60

Query: 465 PNEKVKDDFEGEKSKDGVSGPKKGSRYVPSFIPPPLATKGKESERKKEE 611
           PN+K KDD EGEKSKDGVSGPKKGSRYVPSFIPPP+ATKGKESERKKEE
Sbjct: 61  PNDKFKDDSEGEKSKDGVSGPKKGSRYVPSFIPPPMATKGKESERKKEE 109


>ref|XP_003628951.1| U2-associated protein SR140 [Medicago truncatula]
           gi|355522973|gb|AET03427.1| U2-associated protein SR140
           [Medicago truncatula]
          Length = 1139

 Score =  163 bits (412), Expect = 3e-38
 Identities = 81/106 (76%), Positives = 85/106 (80%)
 Frame = +3

Query: 285 MSSFSITRKKTPFQKHXXXXXXXXXXXXXXXXXLYAEFVESFQGDITPGSKAFVRGGTIN 464
           MSSFSITRKKTPFQKH                 LYAEFVESFQGD  PGSK FVRGGTIN
Sbjct: 1   MSSFSITRKKTPFQKHREEEEAKKKRAEDETARLYAEFVESFQGDNAPGSKTFVRGGTIN 60

Query: 465 PNEKVKDDFEGEKSKDGVSGPKKGSRYVPSFIPPPLATKGKESERK 602
           PN+K+KDD EGEKSK+GVSGPKKGSRYVPSFIPPPLATKGKESE+K
Sbjct: 61  PNDKLKDDSEGEKSKEGVSGPKKGSRYVPSFIPPPLATKGKESEKK 106


>ref|XP_002308714.1| predicted protein [Populus trichocarpa] gi|222854690|gb|EEE92237.1|
           predicted protein [Populus trichocarpa]
          Length = 988

 Score =  160 bits (406), Expect = 1e-37
 Identities = 81/109 (74%), Positives = 84/109 (77%)
 Frame = +3

Query: 285 MSSFSITRKKTPFQKHXXXXXXXXXXXXXXXXXLYAEFVESFQGDITPGSKAFVRGGTIN 464
           MSSFSITRKKTPFQKH                 LYAEFVESFQGD  PGSK FVRGGTIN
Sbjct: 1   MSSFSITRKKTPFQKHREEEEAKKKRAEDETARLYAEFVESFQGDNAPGSKTFVRGGTIN 60

Query: 465 PNEKVKDDFEGEKSKDGVSGPKKGSRYVPSFIPPPLATKGKESERKKEE 611
           PNEK+K D EGEKSKDGVS PKKGSRYVPSFIPPP+A KGKE ERK+EE
Sbjct: 61  PNEKLKSDAEGEKSKDGVSVPKKGSRYVPSFIPPPMAPKGKEPERKREE 109


>ref|XP_002515412.1| RNA binding protein, putative [Ricinus communis]
           gi|223545356|gb|EEF46861.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 979

 Score =  160 bits (405), Expect = 2e-37
 Identities = 80/109 (73%), Positives = 85/109 (77%)
 Frame = +3

Query: 285 MSSFSITRKKTPFQKHXXXXXXXXXXXXXXXXXLYAEFVESFQGDITPGSKAFVRGGTIN 464
           MSSFSITRKKTPFQKH                 LYAEFVESFQGD  PGSK FVRGGTIN
Sbjct: 1   MSSFSITRKKTPFQKHREEEEAKKKREDDETARLYAEFVESFQGDNAPGSKTFVRGGTIN 60

Query: 465 PNEKVKDDFEGEKSKDGVSGPKKGSRYVPSFIPPPLATKGKESERKKEE 611
           PN+K+K D EGEKSKDGVS PKKGSRYVPSF+PPP+A KGKESE+KKEE
Sbjct: 61  PNDKLKTDSEGEKSKDGVSVPKKGSRYVPSFLPPPMAIKGKESEKKKEE 109