BLASTX nr result

ID: Glycyrrhiza24_contig00020916 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00020916
         (356 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003594432.1| Kinetochore protein NDC80-like protein [Medi...   151   5e-35
ref|XP_003547058.1| PREDICTED: kinetochore protein NDC80 homolog...   139   3e-31
emb|CBI38595.3| unnamed protein product [Vitis vinifera]              121   5e-26
ref|XP_002279662.1| PREDICTED: kinetochore protein NDC80 homolog...   121   5e-26
emb|CBI23882.3| unnamed protein product [Vitis vinifera]              119   3e-25

>ref|XP_003594432.1| Kinetochore protein NDC80-like protein [Medicago truncatula]
           gi|355483480|gb|AES64683.1| Kinetochore protein
           NDC80-like protein [Medicago truncatula]
          Length = 575

 Score =  151 bits (382), Expect = 5e-35
 Identities = 74/104 (71%), Positives = 92/104 (88%), Gaps = 1/104 (0%)
 Frame = -2

Query: 310 RRQPKDSFLPPTPLNLPRDSDASLASSRPSNVGVPTFDLYKERSYQQSAISTVNSFLSSH 131
           RRQPKD++ PPTPLN  RDSD SL SSRPS+VG+P+FDLYK+RSYQQSA++T+NSFLSSH
Sbjct: 9   RRQPKDTYPPPTPLN-HRDSDISLVSSRPSSVGIPSFDLYKDRSYQQSAVATINSFLSSH 67

Query: 130 NFPVTFRTT-SPSAKDIHETLRFLLSVLDFPTSKVEDDLPLLLK 2
           NF ++F+++ SPSAK IHETL FL  +L+FP +K+EDDLPLLLK
Sbjct: 68  NFHISFKSSPSPSAKQIHETLIFLTKLLEFPVTKLEDDLPLLLK 111


>ref|XP_003547058.1| PREDICTED: kinetochore protein NDC80 homolog [Glycine max]
          Length = 593

 Score =  139 bits (349), Expect = 3e-31
 Identities = 75/115 (65%), Positives = 89/115 (77%), Gaps = 12/115 (10%)
 Frame = -2

Query: 310 RRQPKDSFLPP---TPLNL------PRDSDASLASSRPSNVGV---PTFDLYKERSYQQS 167
           RRQ KDSF+PP   TPL+        RDSD S   SRPS+VG+   PT DLY E SY+Q+
Sbjct: 6   RRQAKDSFIPPAPPTPLDFHHRQYSSRDSDVS---SRPSSVGIGRRPTLDLYNEPSYKQT 62

Query: 166 AISTVNSFLSSHNFPVTFRTTSPSAKDIHETLRFLLSVLDFPTSKVEDDLPLLLK 2
            +ST+NSFLSSHNFP+TF+TT PSAKDIHETL+FLLS+LDFP SK+E+DLP LLK
Sbjct: 63  VVSTINSFLSSHNFPITFKTTLPSAKDIHETLKFLLSLLDFPFSKLEEDLPPLLK 117


>emb|CBI38595.3| unnamed protein product [Vitis vinifera]
          Length = 719

 Score =  121 bits (304), Expect = 5e-26
 Identities = 65/114 (57%), Positives = 81/114 (71%), Gaps = 11/114 (9%)
 Frame = -2

Query: 310 RRQPKDSFLPPTP--------LNLPRDSDASLASSRPSNVGVPTF---DLYKERSYQQSA 164
           RR+PKDSF PP P          L RDSDAS A SRPS++G+      D   +RSYQ SA
Sbjct: 220 RRRPKDSFRPPPPPPPSVDHHRQLSRDSDASFAGSRPSSLGISRSSAGDALTDRSYQLSA 279

Query: 163 ISTVNSFLSSHNFPVTFRTTSPSAKDIHETLRFLLSVLDFPTSKVEDDLPLLLK 2
           I T+NSFL+SH+ P++ +   PSAKDI ETL+FL+S LDFPT+K+EDDLP+LLK
Sbjct: 280 IRTINSFLASHSSPLSLKPPLPSAKDISETLKFLISQLDFPTTKLEDDLPILLK 333


>ref|XP_002279662.1| PREDICTED: kinetochore protein NDC80 homolog [Vitis vinifera]
          Length = 571

 Score =  121 bits (304), Expect = 5e-26
 Identities = 65/114 (57%), Positives = 81/114 (71%), Gaps = 11/114 (9%)
 Frame = -2

Query: 310 RRQPKDSFLPPTP--------LNLPRDSDASLASSRPSNVGVPTF---DLYKERSYQQSA 164
           RR+PKDSF PP P          L RDSDAS A SRPS++G+      D   +RSYQ SA
Sbjct: 6   RRRPKDSFRPPPPPPPSVDHHRQLSRDSDASFAGSRPSSLGISRSSAGDALTDRSYQLSA 65

Query: 163 ISTVNSFLSSHNFPVTFRTTSPSAKDIHETLRFLLSVLDFPTSKVEDDLPLLLK 2
           I T+NSFL+SH+ P++ +   PSAKDI ETL+FL+S LDFPT+K+EDDLP+LLK
Sbjct: 66  IRTINSFLASHSSPLSLKPPLPSAKDISETLKFLISQLDFPTTKLEDDLPILLK 119


>emb|CBI23882.3| unnamed protein product [Vitis vinifera]
          Length = 509

 Score =  119 bits (298), Expect = 3e-25
 Identities = 64/114 (56%), Positives = 80/114 (70%), Gaps = 11/114 (9%)
 Frame = -2

Query: 310 RRQPKDSFLPPTP--------LNLPRDSDASLASSRPSNVGV---PTFDLYKERSYQQSA 164
           RR+PKDS  PP P            RDSDAS ASSRPS++G+      D   +RSYQ SA
Sbjct: 6   RRRPKDSIRPPPPPAPSVDHHRQFSRDSDASFASSRPSSLGINRSSAGDALTDRSYQLSA 65

Query: 163 ISTVNSFLSSHNFPVTFRTTSPSAKDIHETLRFLLSVLDFPTSKVEDDLPLLLK 2
           I T+NSFL+SH+ P++ +   PSAKDI ETL+FL+S LDFPT+K+EDDLP+LLK
Sbjct: 66  IRTINSFLASHSSPLSLKPPLPSAKDISETLKFLISQLDFPTTKLEDDLPILLK 119


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