BLASTX nr result

ID: Glycyrrhiza24_contig00020912 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00020912
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003528847.1| PREDICTED: ATP-dependent helicase BRM-like [...   185   3e-45
ref|XP_003627563.1| ATP-dependent helicase BRM [Medicago truncat...   185   3e-45
ref|XP_003548671.1| PREDICTED: ATP-dependent helicase BRM-like [...   184   6e-45
ref|XP_002301364.1| chromatin remodeling complex subunit [Populu...   184   6e-45
ref|XP_002320143.1| hypothetical protein POPTRDRAFT_244585 [Popu...   183   1e-44

>ref|XP_003528847.1| PREDICTED: ATP-dependent helicase BRM-like [Glycine max]
          Length = 2226

 Score =  185 bits (470), Expect = 3e-45
 Identities = 89/92 (96%), Positives = 91/92 (98%)
 Frame = -1

Query: 276  LNNRCMELRKTCNHPLLNYPLFSDLSKDFIVKSCGKLWILDRILIKLQRTGHRVLLFSTM 97
            LNNRCMELRKTCNHPLLNYP FSDLSK+FIVKSCGKLWILDRILIKLQRTGHRVLLFSTM
Sbjct: 1295 LNNRCMELRKTCNHPLLNYPFFSDLSKEFIVKSCGKLWILDRILIKLQRTGHRVLLFSTM 1354

Query: 96   TKLLDILEEYLQWRRLVHRRIDGTTSLEDRES 1
            TKLLDILEEYLQWRRLV+RRIDGTTSLEDRES
Sbjct: 1355 TKLLDILEEYLQWRRLVYRRIDGTTSLEDRES 1386


>ref|XP_003627563.1| ATP-dependent helicase BRM [Medicago truncatula]
            gi|355521585|gb|AET02039.1| ATP-dependent helicase BRM
            [Medicago truncatula]
          Length = 2175

 Score =  185 bits (470), Expect = 3e-45
 Identities = 89/92 (96%), Positives = 91/92 (98%)
 Frame = -1

Query: 276  LNNRCMELRKTCNHPLLNYPLFSDLSKDFIVKSCGKLWILDRILIKLQRTGHRVLLFSTM 97
            LNNRCMELRKTCNHPLLNYP FSDLSK+FIVKSCGKLWILDRILIKLQRTGHRVLLFSTM
Sbjct: 1260 LNNRCMELRKTCNHPLLNYPFFSDLSKEFIVKSCGKLWILDRILIKLQRTGHRVLLFSTM 1319

Query: 96   TKLLDILEEYLQWRRLVHRRIDGTTSLEDRES 1
            TKLLDILEEYLQWRRLV+RRIDGTTSLEDRES
Sbjct: 1320 TKLLDILEEYLQWRRLVYRRIDGTTSLEDRES 1351


>ref|XP_003548671.1| PREDICTED: ATP-dependent helicase BRM-like [Glycine max]
          Length = 2229

 Score =  184 bits (467), Expect = 6e-45
 Identities = 88/92 (95%), Positives = 91/92 (98%)
 Frame = -1

Query: 276  LNNRCMELRKTCNHPLLNYPLFSDLSKDFIVKSCGKLWILDRILIKLQRTGHRVLLFSTM 97
            LNNRCMELRKTCNHPLLNYP FSDLSK+FIV+SCGKLWILDRILIKLQRTGHRVLLFSTM
Sbjct: 1297 LNNRCMELRKTCNHPLLNYPFFSDLSKEFIVRSCGKLWILDRILIKLQRTGHRVLLFSTM 1356

Query: 96   TKLLDILEEYLQWRRLVHRRIDGTTSLEDRES 1
            TKLLDILEEYLQWRRLV+RRIDGTTSLEDRES
Sbjct: 1357 TKLLDILEEYLQWRRLVYRRIDGTTSLEDRES 1388


>ref|XP_002301364.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222843090|gb|EEE80637.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 2222

 Score =  184 bits (467), Expect = 6e-45
 Identities = 87/92 (94%), Positives = 91/92 (98%)
 Frame = -1

Query: 276  LNNRCMELRKTCNHPLLNYPLFSDLSKDFIVKSCGKLWILDRILIKLQRTGHRVLLFSTM 97
            LNNRCMELRKTCNHPLLNYP F+DLSKDF+VKSCGKLW+LDRILIKLQRTGHRVLLFSTM
Sbjct: 1279 LNNRCMELRKTCNHPLLNYPYFNDLSKDFLVKSCGKLWVLDRILIKLQRTGHRVLLFSTM 1338

Query: 96   TKLLDILEEYLQWRRLVHRRIDGTTSLEDRES 1
            TKLLDILEEYLQWRRLV+RRIDGTTSLEDRES
Sbjct: 1339 TKLLDILEEYLQWRRLVYRRIDGTTSLEDRES 1370


>ref|XP_002320143.1| hypothetical protein POPTRDRAFT_244585 [Populus trichocarpa]
           gi|222860916|gb|EEE98458.1| hypothetical protein
           POPTRDRAFT_244585 [Populus trichocarpa]
          Length = 434

 Score =  183 bits (464), Expect = 1e-44
 Identities = 87/92 (94%), Positives = 91/92 (98%)
 Frame = -1

Query: 276 LNNRCMELRKTCNHPLLNYPLFSDLSKDFIVKSCGKLWILDRILIKLQRTGHRVLLFSTM 97
           LNNRCMELRKTCNHPLLNYP F+DLSKDF+V+SCGKLWILDRILIKLQRTGHRVLLFSTM
Sbjct: 195 LNNRCMELRKTCNHPLLNYPYFNDLSKDFLVQSCGKLWILDRILIKLQRTGHRVLLFSTM 254

Query: 96  TKLLDILEEYLQWRRLVHRRIDGTTSLEDRES 1
           TKLLDILEEYLQWRRLV+RRIDGTTSLEDRES
Sbjct: 255 TKLLDILEEYLQWRRLVYRRIDGTTSLEDRES 286


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