BLASTX nr result

ID: Glycyrrhiza24_contig00020878 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00020878
         (415 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003592316.1| TraB domain-containing protein [Medicago tru...   177   6e-43
ref|XP_003536482.1| PREDICTED: traB domain-containing protein-li...   160   1e-37
ref|XP_002318252.1| predicted protein [Populus trichocarpa] gi|2...   156   2e-36
ref|XP_002510844.1| conserved hypothetical protein [Ricinus comm...   155   4e-36
emb|CBI31844.3| unnamed protein product [Vitis vinifera]              144   7e-33

>ref|XP_003592316.1| TraB domain-containing protein [Medicago truncatula]
           gi|355481364|gb|AES62567.1| TraB domain-containing
           protein [Medicago truncatula]
          Length = 380

 Score =  177 bits (450), Expect = 6e-43
 Identities = 84/103 (81%), Positives = 92/103 (89%)
 Frame = +2

Query: 53  IIKSTFPIFTTNPFLVSERPLRPFKVSIKPPPPDFDYRLEISQESRAAIAESHPELLDLA 232
           IIK TFPIFTTNPF +S+  LRP KVS+KPPPPDF+Y+LEIS ESRA I E +PELLDLA
Sbjct: 5   IIKPTFPIFTTNPFFISKTSLRPLKVSVKPPPPDFNYKLEISDESRAVIEECYPELLDLA 64

Query: 233 DCGSLVLVQKKRFGPIPSWRTEFVEPESIWLVGTTHVSKESAM 361
           D GSLVLVQKKRFGP+PSWRTEFVEPE IWL+GTTHVSKESAM
Sbjct: 65  DNGSLVLVQKKRFGPVPSWRTEFVEPEYIWLIGTTHVSKESAM 107


>ref|XP_003536482.1| PREDICTED: traB domain-containing protein-like [Glycine max]
          Length = 371

 Score =  160 bits (405), Expect = 1e-37
 Identities = 78/92 (84%), Positives = 85/92 (92%), Gaps = 1/92 (1%)
 Frame = +2

Query: 89  PFLVSERPLRPF-KVSIKPPPPDFDYRLEISQESRAAIAESHPELLDLADCGSLVLVQKK 265
           PF +S RPLRP  KVS+KPPPPDFDYR EIS+ESRAAIAESHPELLDLAD GSLVLVQKK
Sbjct: 6   PFSLSTRPLRPILKVSVKPPPPDFDYRREISEESRAAIAESHPELLDLADNGSLVLVQKK 65

Query: 266 RFGPIPSWRTEFVEPESIWLVGTTHVSKESAM 361
           RFGP+PSWRTEFVEPESIWL+GTTHVS+ SA+
Sbjct: 66  RFGPVPSWRTEFVEPESIWLIGTTHVSEVSAV 97


>ref|XP_002318252.1| predicted protein [Populus trichocarpa] gi|222858925|gb|EEE96472.1|
           predicted protein [Populus trichocarpa]
          Length = 146

 Score =  156 bits (394), Expect = 2e-36
 Identities = 68/105 (64%), Positives = 91/105 (86%)
 Frame = +2

Query: 44  MDSIIKSTFPIFTTNPFLVSERPLRPFKVSIKPPPPDFDYRLEISQESRAAIAESHPELL 223
           M++++K  FPIF+ NP +++ +P +P KVSIKPPPPDFD+R EI QESRA I+ ++PELL
Sbjct: 1   METLLKIPFPIFSNNPHILTTKPTKPLKVSIKPPPPDFDFRSEILQESRATISRTYPELL 60

Query: 224 DLADCGSLVLVQKKRFGPIPSWRTEFVEPESIWLVGTTHVSKESA 358
           DLA+ G+L+L++KK FGP+PSWRTEFVEPE+IWLVGTTH+S +SA
Sbjct: 61  DLANDGTLLLIEKKLFGPVPSWRTEFVEPEAIWLVGTTHISSQSA 105


>ref|XP_002510844.1| conserved hypothetical protein [Ricinus communis]
           gi|223549959|gb|EEF51446.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 390

 Score =  155 bits (391), Expect = 4e-36
 Identities = 68/105 (64%), Positives = 88/105 (83%)
 Frame = +2

Query: 44  MDSIIKSTFPIFTTNPFLVSERPLRPFKVSIKPPPPDFDYRLEISQESRAAIAESHPELL 223
           MD+++ STFPIF+  P     +P +P KVSIKPPPPDFD+R EI QESR  IA++HP+LL
Sbjct: 1   MDTLLNSTFPIFSKYPNFPISKPAKPLKVSIKPPPPDFDFRSEILQESRTTIAKNHPDLL 60

Query: 224 DLADCGSLVLVQKKRFGPIPSWRTEFVEPESIWLVGTTHVSKESA 358
           DLAD G+L+L++K+ FGP+P+WRTEFVEPE+IWLVGT+H+S ESA
Sbjct: 61  DLADSGNLILIEKRLFGPVPAWRTEFVEPEAIWLVGTSHISTESA 105


>emb|CBI31844.3| unnamed protein product [Vitis vinifera]
          Length = 380

 Score =  144 bits (363), Expect = 7e-33
 Identities = 66/103 (64%), Positives = 85/103 (82%), Gaps = 2/103 (1%)
 Frame = +2

Query: 56  IKSTFPIFTTNPFLVSERPLRPFKVS--IKPPPPDFDYRLEISQESRAAIAESHPELLDL 229
           + STFPIFT NP   + +P +P KVS  IKPPPPDFD+R +I ++SRA IA++HP+LLDL
Sbjct: 4   LASTFPIFTANPNFHTTKPSKPSKVSVSIKPPPPDFDFRAQILEDSRATIAQTHPQLLDL 63

Query: 230 ADCGSLVLVQKKRFGPIPSWRTEFVEPESIWLVGTTHVSKESA 358
           AD GSLV+++K+ FGP+P+WRTEFVEPE IWL+GTTH+S  SA
Sbjct: 64  ADNGSLVVIEKRLFGPVPAWRTEFVEPEEIWLLGTTHISSFSA 106


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