BLASTX nr result

ID: Glycyrrhiza24_contig00020862 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00020862
         (271 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003628792.1| hypothetical protein MTR_8g066780 [Medicago ...    62   6e-08
ref|XP_003517045.1| PREDICTED: E3 ubiquitin-protein ligase Os04g...    56   3e-06
ref|XP_003612874.1| RING-H2 finger protein ATL3A [Medicago trunc...    55   6e-06
ref|XP_003534279.1| PREDICTED: E3 ubiquitin-protein ligase Os04g...    55   8e-06

>ref|XP_003628792.1| hypothetical protein MTR_8g066780 [Medicago truncatula]
           gi|355522814|gb|AET03268.1| hypothetical protein
           MTR_8g066780 [Medicago truncatula]
          Length = 356

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 29/36 (80%), Positives = 34/36 (94%), Gaps = 1/36 (2%)
 Frame = -1

Query: 169 VLHCVLSPVATKRSFSSGRFSIGKIDRG-RQGIVPV 65
           VLHCV+SP+A KRSFS+GRFS+GKIDRG RQGI+PV
Sbjct: 321 VLHCVMSPIAMKRSFSNGRFSLGKIDRGKRQGILPV 356


>ref|XP_003517045.1| PREDICTED: E3 ubiquitin-protein ligase Os04g0590900-like [Glycine
           max]
          Length = 364

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 25/35 (71%), Positives = 30/35 (85%)
 Frame = -1

Query: 169 VLHCVLSPVATKRSFSSGRFSIGKIDRGRQGIVPV 65
           VLHCVLSP+A KRSFSSGRFS+ +  RGRQ ++PV
Sbjct: 330 VLHCVLSPIAMKRSFSSGRFSLSRNGRGRQWVLPV 364


>ref|XP_003612874.1| RING-H2 finger protein ATL3A [Medicago truncatula]
           gi|355514209|gb|AES95832.1| RING-H2 finger protein ATL3A
           [Medicago truncatula]
          Length = 481

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 28/65 (43%), Positives = 36/65 (55%)
 Frame = -1

Query: 265 HVNQEEDDDGGPXXXXXXXXXXXXXXXXXXXRVLHCVLSPVATKRSFSSGRFSIGKIDRG 86
           H+NQE+D   G                    +VLHCVLSP+A KRSFSSGRF + +  RG
Sbjct: 306 HMNQEQDCSQGEGSSKRLRGESESSKCSYRRKVLHCVLSPIAMKRSFSSGRFFLSRSGRG 365

Query: 85  RQGIV 71
           R G++
Sbjct: 366 RLGVL 370


>ref|XP_003534279.1| PREDICTED: E3 ubiquitin-protein ligase Os04g0590900-like [Glycine
           max]
          Length = 370

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 24/35 (68%), Positives = 30/35 (85%)
 Frame = -1

Query: 169 VLHCVLSPVATKRSFSSGRFSIGKIDRGRQGIVPV 65
           VLHCVLSP+A KRSFSSGRFS+ +  RG+Q ++PV
Sbjct: 336 VLHCVLSPIAMKRSFSSGRFSLSRNGRGKQWVLPV 370


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