BLASTX nr result
ID: Glycyrrhiza24_contig00020859
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza24_contig00020859
(598 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003553418.1| PREDICTED: putative pentatricopeptide repeat... 319 3e-85
ref|XP_003625160.1| Pentatricopeptide repeat-containing protein ... 318 3e-85
ref|XP_002283419.2| PREDICTED: MATE efflux family protein 1 [Vit... 304 9e-81
ref|XP_004136748.1| PREDICTED: putative pentatricopeptide repeat... 297 1e-78
ref|XP_004165491.1| PREDICTED: LOW QUALITY PROTEIN: putative pen... 296 2e-78
>ref|XP_003553418.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g52630-like [Glycine max]
Length = 582
Score = 319 bits (817), Expect = 3e-85
Identities = 157/200 (78%), Positives = 180/200 (90%), Gaps = 1/200 (0%)
Frame = -2
Query: 597 EALNLFKQVLVEE-NVGVNDFTLSSVLRVCATSTLLQLGKQIHGLCFKTSFDSSCFVASS 421
EALNLFK+ L ++ ++ VNDFTLSSVLRVC+ STL +LGKQ+HGLCFKTSFDSSCFVASS
Sbjct: 192 EALNLFKRALEQDYDIRVNDFTLSSVLRVCSASTLFELGKQVHGLCFKTSFDSSCFVASS 251
Query: 420 LISLYSKCGVVEGAYQVFDEVTVRNLGMWNAILIACAQHAHTNRTFELFEQITKSDVVGG 241
LISLYSKCGVVEG Y+VF+EV VRNLGMWNA+LIACAQHAHT RTFELFE++ +
Sbjct: 252 LISLYSKCGVVEGGYKVFEEVKVRNLGMWNAMLIACAQHAHTGRTFELFEEMERV----- 306
Query: 240 GVKPNFITFLGVLYACSHAGLVERGKHYFELMKDYGIEPGSQHYATMVDLLGRAGKLQEA 61
GVKPNFITFL +LYACSHAGLVE+G+H F LMK++GIEPGSQHYAT+VDLLGRAGKL+EA
Sbjct: 307 GVKPNFITFLCLLYACSHAGLVEKGEHCFGLMKEHGIEPGSQHYATLVDLLGRAGKLEEA 366
Query: 60 VQVVKEMPMEPTESVWGALL 1
V V+KEMPM+PTESVWGALL
Sbjct: 367 VLVIKEMPMQPTESVWGALL 386
Score = 79.0 bits (193), Expect = 6e-13
Identities = 53/198 (26%), Positives = 93/198 (46%)
Frame = -2
Query: 594 ALNLFKQVLVEENVGVNDFTLSSVLRVCATSTLLQLGKQIHGLCFKTSFDSSCFVASSLI 415
AL F+++L + +D TL + + A + L L +H L KT+ FV SSL+
Sbjct: 92 ALRFFRRML-RHGLLPDDHTLPTAAKSVAALSSLPLALSLHALSLKTAHHHDVFVGSSLV 150
Query: 414 SLYSKCGVVEGAYQVFDEVTVRNLGMWNAILIACAQHAHTNRTFELFEQITKSDVVGGGV 235
Y+KCG V A +VFDE+ +N+ W+ ++ +Q LF++ + D +
Sbjct: 151 DTYAKCGDVNLARKVFDEMPHKNVVSWSGMIYGYSQMGLDEEALNLFKRALEQDY---DI 207
Query: 234 KPNFITFLGVLYACSHAGLVERGKHYFELMKDYGIEPGSQHYATMVDLLGRAGKLQEAVQ 55
+ N T VL CS + L E GK L + ++++ L + G ++ +
Sbjct: 208 RVNDFTLSSVLRVCSASTLFELGKQVHGLCFKTSFDSSCFVASSLISLYSKCGVVEGGYK 267
Query: 54 VVKEMPMEPTESVWGALL 1
V +E+ + +W A+L
Sbjct: 268 VFEEVKVR-NLGMWNAML 284
>ref|XP_003625160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124360204|gb|ABN08217.1| Tetratricopeptide-like
helical [Medicago truncatula]
gi|355500175|gb|AES81378.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 596
Score = 318 bits (816), Expect = 3e-85
Identities = 159/200 (79%), Positives = 180/200 (90%), Gaps = 1/200 (0%)
Frame = -2
Query: 597 EALNLFKQVLVEE-NVGVNDFTLSSVLRVCATSTLLQLGKQIHGLCFKTSFDSSCFVASS 421
E+L LFK+ LVEE N GVNDFTLSSVLRVC STLLQ+G+ IHGL FKTSFDSSCFVASS
Sbjct: 205 ESLRLFKRFLVEEENEGVNDFTLSSVLRVCGGSTLLQMGRLIHGLSFKTSFDSSCFVASS 264
Query: 420 LISLYSKCGVVEGAYQVFDEVTVRNLGMWNAILIACAQHAHTNRTFELFEQITKSDVVGG 241
LISLYSKCGVVE AY VF+EVTVRNLGMWNA+LIACAQHAHT++TFELF+++ G
Sbjct: 265 LISLYSKCGVVEEAYDVFEEVTVRNLGMWNAMLIACAQHAHTDKTFELFDKMKSV----G 320
Query: 240 GVKPNFITFLGVLYACSHAGLVERGKHYFELMKDYGIEPGSQHYATMVDLLGRAGKLQEA 61
G+K NFITFL VLYACSHAGLVE+GK+YFELMKDYGIEPG+QHY+TMVDLLGRAGKL +A
Sbjct: 321 GMKANFITFLCVLYACSHAGLVEKGKYYFELMKDYGIEPGTQHYSTMVDLLGRAGKLNDA 380
Query: 60 VQVVKEMPMEPTESVWGALL 1
V++++EMPMEPTESVWGALL
Sbjct: 381 VKLIEEMPMEPTESVWGALL 400
Score = 80.9 bits (198), Expect = 2e-13
Identities = 50/198 (25%), Positives = 95/198 (47%)
Frame = -2
Query: 594 ALNLFKQVLVEENVGVNDFTLSSVLRVCATSTLLQLGKQIHGLCFKTSFDSSCFVASSLI 415
+LN F+ +++ + V +D S + C + L + K +H KT++ FV SS+I
Sbjct: 105 SLNYFR-LMLRQGVPPDDHIFPSATKSCGILSSLPVAKMLHCFALKTAYHLDIFVGSSVI 163
Query: 414 SLYSKCGVVEGAYQVFDEVTVRNLGMWNAILIACAQHAHTNRTFELFEQITKSDVVGGGV 235
+Y+KCG + A+ VFDE+ RN+ W+ ++ Q + + LF++ + G
Sbjct: 164 DMYAKCGDICYAHNVFDEMPYRNVVSWSGLIYGYVQLGEDDESLRLFKRFLVEEENEG-- 221
Query: 234 KPNFITFLGVLYACSHAGLVERGKHYFELMKDYGIEPGSQHYATMVDLLGRAGKLQEAVQ 55
N T VL C + L++ G+ L + ++++ L + G ++EA
Sbjct: 222 -VNDFTLSSVLRVCGGSTLLQMGRLIHGLSFKTSFDSSCFVASSLISLYSKCGVVEEAYD 280
Query: 54 VVKEMPMEPTESVWGALL 1
V +E+ + +W A+L
Sbjct: 281 VFEEVTVR-NLGMWNAML 297
>ref|XP_002283419.2| PREDICTED: MATE efflux family protein 1 [Vitis vinifera]
Length = 977
Score = 304 bits (778), Expect = 9e-81
Identities = 148/199 (74%), Positives = 173/199 (86%)
Frame = -2
Query: 597 EALNLFKQVLVEENVGVNDFTLSSVLRVCATSTLLQLGKQIHGLCFKTSFDSSCFVASSL 418
EAL LFKQ L+E+ + VNDFT SSV+RVC STLL+LGKQIHGLC KTS+DSS FV SSL
Sbjct: 94 EALRLFKQALIED-LDVNDFTFSSVVRVCGNSTLLELGKQIHGLCLKTSYDSSSFVGSSL 152
Query: 417 ISLYSKCGVVEGAYQVFDEVTVRNLGMWNAILIACAQHAHTNRTFELFEQITKSDVVGGG 238
ISLYSKCGV+E AY VF E+ +RNLGMWNA+LIACAQHAHT + F+LF+Q+ G G
Sbjct: 153 ISLYSKCGVIEDAYLVFHEIPIRNLGMWNAMLIACAQHAHTEKAFDLFKQME-----GVG 207
Query: 237 VKPNFITFLGVLYACSHAGLVERGKHYFELMKDYGIEPGSQHYATMVDLLGRAGKLQEAV 58
+KPNFITFL VLYACSHAGLVE+G+ YFELMK+YGIEPG+QHYA+MVDLLGRAGKL++AV
Sbjct: 208 MKPNFITFLCVLYACSHAGLVEKGQFYFELMKEYGIEPGAQHYASMVDLLGRAGKLKDAV 267
Query: 57 QVVKEMPMEPTESVWGALL 1
++K+MPMEPTESVWGALL
Sbjct: 268 SIIKKMPMEPTESVWGALL 286
Score = 90.5 bits (223), Expect = 2e-16
Identities = 49/190 (25%), Positives = 91/190 (47%)
Frame = -2
Query: 570 LVEENVGVNDFTLSSVLRVCATSTLLQLGKQIHGLCFKTSFDSSCFVASSLISLYSKCGV 391
+++ V +D S + C + +G+ +H KT +D FV SS++ +Y+KCG
Sbjct: 1 MLDNGVRPDDHIFPSATKACGILSRCDIGQSVHSFAVKTGYDCDVFVGSSMVDMYAKCGE 60
Query: 390 VEGAYQVFDEVTVRNLGMWNAILIACAQHAHTNRTFELFEQITKSDVVGGGVKPNFITFL 211
+ A ++FDE+ RN+ W+ ++ +Q LF+Q D + N TF
Sbjct: 61 IGDARKMFDEMPDRNVVSWSGMIYGYSQMGEDEEALRLFKQALIED-----LDVNDFTFS 115
Query: 210 GVLYACSHAGLVERGKHYFELMKDYGIEPGSQHYATMVDLLGRAGKLQEAVQVVKEMPME 31
V+ C ++ L+E GK L + S ++++ L + G +++A V E+P+
Sbjct: 116 SVVRVCGNSTLLELGKQIHGLCLKTSYDSSSFVGSSLISLYSKCGVIEDAYLVFHEIPIR 175
Query: 30 PTESVWGALL 1
+W A+L
Sbjct: 176 -NLGMWNAML 184
>ref|XP_004136748.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g52630-like [Cucumis sativus]
Length = 598
Score = 297 bits (760), Expect = 1e-78
Identities = 144/199 (72%), Positives = 169/199 (84%)
Frame = -2
Query: 597 EALNLFKQVLVEENVGVNDFTLSSVLRVCATSTLLQLGKQIHGLCFKTSFDSSCFVASSL 418
EAL LFKQ L+E+ V VNDFT SSV+RVC++ST L+LGK IHGLC K SFDSS FV S+L
Sbjct: 210 EALTLFKQALIED-VDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSAL 268
Query: 417 ISLYSKCGVVEGAYQVFDEVTVRNLGMWNAILIACAQHAHTNRTFELFEQITKSDVVGGG 238
ISLYSKCGV+EGAYQVFDE+ RNLG+WN++LIACAQHAHT R F LFE++ G
Sbjct: 269 ISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGNV-----G 323
Query: 237 VKPNFITFLGVLYACSHAGLVERGKHYFELMKDYGIEPGSQHYATMVDLLGRAGKLQEAV 58
+KPNFI+FL VLYACSHAGLVE+G+ YF LM+DYGIEP ++HYA++VDLLGRAGKLQEAV
Sbjct: 324 MKPNFISFLSVLYACSHAGLVEKGREYFSLMRDYGIEPETEHYASLVDLLGRAGKLQEAV 383
Query: 57 QVVKEMPMEPTESVWGALL 1
V+K+MPM PTESVWGALL
Sbjct: 384 SVIKQMPMRPTESVWGALL 402
Score = 87.0 bits (214), Expect = 2e-15
Identities = 57/198 (28%), Positives = 91/198 (45%)
Frame = -2
Query: 594 ALNLFKQVLVEENVGVNDFTLSSVLRVCATSTLLQLGKQIHGLCFKTSFDSSCFVASSLI 415
AL F+++L + V +D S + C +GK +H L KT + FV SSL+
Sbjct: 110 ALQFFRRML-NDGVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLV 168
Query: 414 SLYSKCGVVEGAYQVFDEVTVRNLGMWNAILIACAQHAHTNRTFELFEQITKSDVVGGGV 235
+Y+KCG + A +FDE+ RN+ W+ ++ AQ LF+Q D V
Sbjct: 169 DMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIED-----V 223
Query: 234 KPNFITFLGVLYACSHAGLVERGKHYFELMKDYGIEPGSQHYATMVDLLGRAGKLQEAVQ 55
N TF V+ CS + +E GK L + S + ++ L + G ++ A Q
Sbjct: 224 DVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQ 283
Query: 54 VVKEMPMEPTESVWGALL 1
V E+P +W ++L
Sbjct: 284 VFDEIPTR-NLGLWNSML 300
>ref|XP_004165491.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At5g52630-like [Cucumis
sativus]
Length = 598
Score = 296 bits (758), Expect = 2e-78
Identities = 144/199 (72%), Positives = 168/199 (84%)
Frame = -2
Query: 597 EALNLFKQVLVEENVGVNDFTLSSVLRVCATSTLLQLGKQIHGLCFKTSFDSSCFVASSL 418
EAL LFKQ L+E+ V VNDFT SSV+RVC++ST L+LGK IHGLC K SFDSS FV S+L
Sbjct: 210 EALTLFKQALIED-VDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSAL 268
Query: 417 ISLYSKCGVVEGAYQVFDEVTVRNLGMWNAILIACAQHAHTNRTFELFEQITKSDVVGGG 238
ISLYSKCGV+EGAYQVFDE+ RNLG+WN++LIACAQHAHT R F LFE++ G
Sbjct: 269 ISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGNV-----G 323
Query: 237 VKPNFITFLGVLYACSHAGLVERGKHYFELMKDYGIEPGSQHYATMVDLLGRAGKLQEAV 58
+KPNFI FL VLYACSHAGLVE+G+ YF LM+DYGIEP ++HYA++VDLLGRAGKLQEAV
Sbjct: 324 MKPNFIXFLSVLYACSHAGLVEKGREYFSLMRDYGIEPETEHYASLVDLLGRAGKLQEAV 383
Query: 57 QVVKEMPMEPTESVWGALL 1
V+K+MPM PTESVWGALL
Sbjct: 384 SVIKQMPMRPTESVWGALL 402
Score = 87.0 bits (214), Expect = 2e-15
Identities = 57/198 (28%), Positives = 91/198 (45%)
Frame = -2
Query: 594 ALNLFKQVLVEENVGVNDFTLSSVLRVCATSTLLQLGKQIHGLCFKTSFDSSCFVASSLI 415
AL F+++L + V +D S + C +GK +H L KT + FV SSL+
Sbjct: 110 ALQFFRRML-NDGVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLV 168
Query: 414 SLYSKCGVVEGAYQVFDEVTVRNLGMWNAILIACAQHAHTNRTFELFEQITKSDVVGGGV 235
+Y+KCG + A +FDE+ RN+ W+ ++ AQ LF+Q D V
Sbjct: 169 DMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIED-----V 223
Query: 234 KPNFITFLGVLYACSHAGLVERGKHYFELMKDYGIEPGSQHYATMVDLLGRAGKLQEAVQ 55
N TF V+ CS + +E GK L + S + ++ L + G ++ A Q
Sbjct: 224 DVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQ 283
Query: 54 VVKEMPMEPTESVWGALL 1
V E+P +W ++L
Sbjct: 284 VFDEIPTR-NLGLWNSML 300