BLASTX nr result

ID: Glycyrrhiza24_contig00020856 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00020856
         (588 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003518025.1| PREDICTED: uncharacterized protein LOC100797...   118   9e-25
ref|XP_004161296.1| PREDICTED: ubiquitin carboxyl-terminal hydro...    63   4e-08
ref|XP_004136544.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin ca...    63   4e-08
emb|CBI39086.3| unnamed protein product [Vitis vinifera]               62   7e-08
ref|XP_002458573.1| hypothetical protein SORBIDRAFT_03g035900 [S...    62   7e-08

>ref|XP_003518025.1| PREDICTED: uncharacterized protein LOC100797919 [Glycine max]
          Length = 360

 Score =  118 bits (295), Expect = 9e-25
 Identities = 61/95 (64%), Positives = 71/95 (74%)
 Frame = +1

Query: 1   SRNAYFKLILINQVDANKSVVKETHQKFNGGYRSWGSLFVNLSDFCDFKQGYLVNDTCII 180
           SRN +FKL LINQVD NKS+ KET QKFNGGYR WGS F+NL+DF + KQGYLV +TCII
Sbjct: 71  SRNTFFKLALINQVDRNKSIAKETQQKFNGGYRCWGSFFLNLTDFNNPKQGYLVRNTCII 130

Query: 181 EAHVCVSDLSTTIQADNLNRITPTNDSKLGDDQAT 285
           EAH+CVSDL+  IQ       +P +DS    DQAT
Sbjct: 131 EAHICVSDLAPKIQVH--PNSSPIHDS---CDQAT 160



 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 28/39 (71%), Positives = 32/39 (82%)
 Frame = +1

Query: 472 AFVPLLEEACNWHPSLIRSQSNRTRRFKLWAFTSLGQVL 588
           AF+PLLEE C WHP+LI+ Q  RTRRF+ WAFTSLG VL
Sbjct: 209 AFIPLLEEVCIWHPNLIKCQRERTRRFRQWAFTSLGHVL 247


>ref|XP_004161296.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Cucumis
           sativus]
          Length = 466

 Score = 62.8 bits (151), Expect = 4e-08
 Identities = 33/67 (49%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
 Frame = +1

Query: 1   SRNAYFKLILINQVDANKSVVKETHQKFNGGYRSWG-SLFVNLSDFCDFKQGYLVNDTCI 177
           SR A F L ++NQV    S+ K+T  +FN     WG + F+ LSD  D  +GYLVNDTCI
Sbjct: 111 SRYAQFSLAVVNQVHKKYSIRKDTKHQFNARESDWGFTSFMPLSDLYDPSRGYLVNDTCI 170

Query: 178 IEAHVCV 198
           +EA V V
Sbjct: 171 VEAEVLV 177


>ref|XP_004136544.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
           hydrolase 12-like [Cucumis sativus]
          Length = 1110

 Score = 62.8 bits (151), Expect = 4e-08
 Identities = 33/67 (49%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
 Frame = +1

Query: 1   SRNAYFKLILINQVDANKSVVKETHQKFNGGYRSWG-SLFVNLSDFCDFKQGYLVNDTCI 177
           SR A F L ++NQV    S+ K+T  +FN     WG + F+ LSD  D  +GYLVNDTCI
Sbjct: 111 SRYAQFSLAVVNQVHKKYSIRKDTKHQFNARESDWGFTSFMPLSDLYDPSRGYLVNDTCI 170

Query: 178 IEAHVCV 198
           +EA V V
Sbjct: 171 VEAEVLV 177


>emb|CBI39086.3| unnamed protein product [Vitis vinifera]
          Length = 1116

 Score = 62.0 bits (149), Expect = 7e-08
 Identities = 33/67 (49%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
 Frame = +1

Query: 1   SRNAYFKLILINQVDANKSVVKETHQKFNGGYRSWG-SLFVNLSDFCDFKQGYLVNDTCI 177
           SR A F L ++NQ+    S+ K+T  +FN     WG + F+ LSD  D  +GYLVNDTCI
Sbjct: 114 SRYAQFSLSVVNQIHNKYSIRKDTQHQFNARESDWGFTSFMPLSDLYDPGRGYLVNDTCI 173

Query: 178 IEAHVCV 198
           IEA V V
Sbjct: 174 IEAEVAV 180


>ref|XP_002458573.1| hypothetical protein SORBIDRAFT_03g035900 [Sorghum bicolor]
           gi|241930548|gb|EES03693.1| hypothetical protein
           SORBIDRAFT_03g035900 [Sorghum bicolor]
          Length = 720

 Score = 62.0 bits (149), Expect = 7e-08
 Identities = 32/67 (47%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
 Frame = +1

Query: 1   SRNAYFKLILINQVDANKSVVKETHQKFNGGYRSWG-SLFVNLSDFCDFKQGYLVNDTCI 177
           SRNA F L ++NQ+D+  S+ KE   +FN     WG + F+ L D  D  +GY+VND CI
Sbjct: 100 SRNAQFSLAVVNQLDSKASLRKEAIHQFNSRESDWGFTSFMPLLDLYDSSKGYVVNDKCI 159

Query: 178 IEAHVCV 198
           IEA V V
Sbjct: 160 IEAEVAV 166


Top