BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00020854
         (739 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540148.1| PREDICTED: tRNA pseudouridine synthase A-lik...   334   1e-89
gb|ABE79574.2| tRNA pseudouridine synthase [Medicago truncatula]      320   3e-85
ref|XP_003592926.1| tRNA pseudouridine synthase A [Medicago trun...   310   2e-82
ref|NP_001242177.1| uncharacterized protein LOC100799818 [Glycin...   309   3e-82
ref|XP_002526453.1| pseudouridylate synthase, putative [Ricinus ...   301   1e-79

>ref|XP_003540148.1| PREDICTED: tRNA pseudouridine synthase A-like [Glycine max]
          Length = 369

 Score =  334 bits (856), Expect = 1e-89
 Identities = 171/219 (78%), Positives = 185/219 (84%), Gaps = 2/219 (0%)
 Frame = -1

Query: 652 MTQNPKHTVEFEECGGDRPSKITKIEYPNPSXXXXXXXXXXXXXXQKQGMSQSRR--IQR 479
           MTQN KHTV+ E     RPSKI+KIEYP+ S               ++GMSQ+ R  IQR
Sbjct: 1   MTQNLKHTVDLECSDNSRPSKISKIEYPSDSDIDEE----------EEGMSQNPRNGIQR 50

Query: 478 YLVAIEYIGSRFSGSQKQLTGRTVVGVLEEAFCKFVGQPVSVTCSSRTDAGVHALSNVCH 299
           YLVAIEYIG+ FSGSQKQL  RTVVG LEEAF KFVGQPVSV+CSSRTDAGVHALSNVCH
Sbjct: 51  YLVAIEYIGTLFSGSQKQLNVRTVVGALEEAFSKFVGQPVSVSCSSRTDAGVHALSNVCH 110

Query: 298 VDIERISKRRPGEVLPPHEPTVVRRAVNHFLQKHESDLMVIDVRCVRSDFHARYKAQERT 119
           VDI+RISKRRPGEVLPPHEP VV RAVNHFLQKH+SDLMVIDVRCV SDFHAR+KAQERT
Sbjct: 111 VDIQRISKRRPGEVLPPHEPAVVGRAVNHFLQKHDSDLMVIDVRCVPSDFHARFKAQERT 170

Query: 118 YFYRLLSGPEPLSTFEKDRAWHVPDELNLPAMQEACRIL 2
           YFYRLLSGPEPLSTFEKDRAWHVP+EL+LPAMQEACR+L
Sbjct: 171 YFYRLLSGPEPLSTFEKDRAWHVPEELSLPAMQEACRVL 209


>gb|ABE79574.2| tRNA pseudouridine synthase [Medicago truncatula]
          Length = 361

 Score =  320 bits (819), Expect = 3e-85
 Identities = 166/223 (74%), Positives = 179/223 (80%), Gaps = 6/223 (2%)
 Frame = -1

Query: 652 MTQ-NPKHTVEFEECG--GDRPSKITKIEYPNPSXXXXXXXXXXXXXXQKQGMSQS---R 491
           MTQ NPKHTVEFEEC    +RPSKI+KIE                     + M+Q    R
Sbjct: 1   MTQLNPKHTVEFEECSDNNNRPSKISKIE---------------------EEMNQHHHHR 39

Query: 490 RIQRYLVAIEYIGSRFSGSQKQLTGRTVVGVLEEAFCKFVGQPVSVTCSSRTDAGVHALS 311
           +IQRYLVA+EYIG+RF G QKQLT RTV GVLE+AFCKFVGQPVSV CSSRTDAGVHALS
Sbjct: 40  KIQRYLVAVEYIGTRFFGFQKQLTDRTVAGVLEDAFCKFVGQPVSVVCSSRTDAGVHALS 99

Query: 310 NVCHVDIERISKRRPGEVLPPHEPTVVRRAVNHFLQKHESDLMVIDVRCVRSDFHARYKA 131
           NVCHVDIERISKR+PGEVL PHEP VVRRAVNHFLQK   DL VIDVRCV SDFHARYKA
Sbjct: 100 NVCHVDIERISKRKPGEVLQPHEPAVVRRAVNHFLQKENGDLAVIDVRCVPSDFHARYKA 159

Query: 130 QERTYFYRLLSGPEPLSTFEKDRAWHVPDELNLPAMQEACRIL 2
           QERTYFYRLLSGPE LSTFEKDRAWH+P+ELNLPAMQEAC++L
Sbjct: 160 QERTYFYRLLSGPETLSTFEKDRAWHIPEELNLPAMQEACKVL 202


>ref|XP_003592926.1| tRNA pseudouridine synthase A [Medicago truncatula]
           gi|355481974|gb|AES63177.1| tRNA pseudouridine synthase
           A [Medicago truncatula]
          Length = 375

 Score =  310 bits (794), Expect = 2e-82
 Identities = 166/237 (70%), Positives = 179/237 (75%), Gaps = 20/237 (8%)
 Frame = -1

Query: 652 MTQ-NPKHTVEFEECG--GDRPSKITKIEYPNPSXXXXXXXXXXXXXXQKQGMSQS---R 491
           MTQ NPKHTVEFEEC    +RPSKI+KIE                     + M+Q    R
Sbjct: 1   MTQLNPKHTVEFEECSDNNNRPSKISKIE---------------------EEMNQHHHHR 39

Query: 490 RIQRYLVAIEYIGSRFSGSQKQLTGRTVVGVLEEAFCKFVGQPVSVTCSSRTDAGVHALS 311
           +IQRYLVA+EYIG+RF G QKQLT RTV GVLE+AFCKFVGQPVSV CSSRTDAGVHALS
Sbjct: 40  KIQRYLVAVEYIGTRFFGFQKQLTDRTVAGVLEDAFCKFVGQPVSVVCSSRTDAGVHALS 99

Query: 310 NVCHVDIERISKRRPGEVLPPHEPTVVRRAVNHFLQKHESDLMVIDVRCVRSDFHARYKA 131
           NVCHVDIERISKR+PGEVL PHEP VVRRAVNHFLQK   DL VIDVRCV SDFHARYKA
Sbjct: 100 NVCHVDIERISKRKPGEVLQPHEPAVVRRAVNHFLQKENGDLAVIDVRCVPSDFHARYKA 159

Query: 130 QERTYFYRLLSGPEPLSTFEKDRAWHVPDELNLPA--------------MQEACRIL 2
           QERTYFYRLLSGPE LSTFEKDRAWH+P+ELNLPA              MQEAC++L
Sbjct: 160 QERTYFYRLLSGPETLSTFEKDRAWHIPEELNLPAMQTYHMRCESLMISMQEACKVL 216


>ref|NP_001242177.1| uncharacterized protein LOC100799818 [Glycine max]
           gi|255637177|gb|ACU18919.1| unknown [Glycine max]
          Length = 370

 Score =  309 bits (792), Expect = 3e-82
 Identities = 165/222 (74%), Positives = 181/222 (81%), Gaps = 5/222 (2%)
 Frame = -1

Query: 652 MTQNPKHTVEFEECGGD---RPSKITKIEYPNPSXXXXXXXXXXXXXXQKQGMSQSRR-- 488
           MT+N KHTV+ E C  +   RPSKI+ IEYP  S               ++ M ++ R  
Sbjct: 1   MTENLKHTVDLE-CSDNNINRPSKISIIEYPIDSDIDE-----------EEEMIKNPRNG 48

Query: 487 IQRYLVAIEYIGSRFSGSQKQLTGRTVVGVLEEAFCKFVGQPVSVTCSSRTDAGVHALSN 308
           IQRYLVAIEYIG+RFSGSQKQL  RTVVGVLEEAF KFVGQPVSV+CSSRT AGVHALSN
Sbjct: 49  IQRYLVAIEYIGTRFSGSQKQLNVRTVVGVLEEAFSKFVGQPVSVSCSSRTVAGVHALSN 108

Query: 307 VCHVDIERISKRRPGEVLPPHEPTVVRRAVNHFLQKHESDLMVIDVRCVRSDFHARYKAQ 128
           VCHVDI+RISKRRPGEVL PHEP VV RAVNHFLQK +SDLMVIDVRCV SDFHAR+KAQ
Sbjct: 109 VCHVDIQRISKRRPGEVLTPHEPAVVGRAVNHFLQKQDSDLMVIDVRCVPSDFHARFKAQ 168

Query: 127 ERTYFYRLLSGPEPLSTFEKDRAWHVPDELNLPAMQEACRIL 2
           ER YFYRLLSGPEPLSTFEKDRAWHVP+EL+LPAMQEACR+L
Sbjct: 169 ERIYFYRLLSGPEPLSTFEKDRAWHVPEELSLPAMQEACRVL 210


>ref|XP_002526453.1| pseudouridylate synthase, putative [Ricinus communis]
           gi|223534233|gb|EEF35948.1| pseudouridylate synthase,
           putative [Ricinus communis]
          Length = 372

 Score =  301 bits (770), Expect = 1e-79
 Identities = 149/217 (68%), Positives = 176/217 (81%)
 Frame = -1

Query: 652 MTQNPKHTVEFEECGGDRPSKITKIEYPNPSXXXXXXXXXXXXXXQKQGMSQSRRIQRYL 473
           MT+NPKH+++ E    +RPSKI K +                     + MS + ++QRYL
Sbjct: 1   MTENPKHSLDTES--RNRPSKILKTQ-DFVDDNEEGEEELQESSFVAESMSSNPKLQRYL 57

Query: 472 VAIEYIGSRFSGSQKQLTGRTVVGVLEEAFCKFVGQPVSVTCSSRTDAGVHALSNVCHVD 293
           +A+EYIG++F+GSQKQL GRTVVGVLEEAFCKF+GQ VSV+ SSRTDAGVHALSNVCHVD
Sbjct: 58  IAVEYIGTKFAGSQKQLNGRTVVGVLEEAFCKFIGQQVSVSLSSRTDAGVHALSNVCHVD 117

Query: 292 IERISKRRPGEVLPPHEPTVVRRAVNHFLQKHESDLMVIDVRCVRSDFHARYKAQERTYF 113
           IERISKR+PGEVLPPHEP VVRRAVNHFLQK+E D+MV DVRCV SDFHAR+KAQERTYF
Sbjct: 118 IERISKRKPGEVLPPHEPAVVRRAVNHFLQKNEGDIMVTDVRCVPSDFHARFKAQERTYF 177

Query: 112 YRLLSGPEPLSTFEKDRAWHVPDELNLPAMQEACRIL 2
           YR LSGPEPLSTFEKDRAWHV ++L++ AMQEAC++L
Sbjct: 178 YRFLSGPEPLSTFEKDRAWHVLEDLDIVAMQEACKVL 214