BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00020843
         (591 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003618091.1| Pentatricopeptide repeat-containing protein ...   240   1e-61
ref|XP_003518581.1| PREDICTED: pentatricopeptide repeat-containi...   218   5e-55
ref|XP_002265138.1| PREDICTED: pentatricopeptide repeat-containi...   185   6e-45
emb|CAN67593.1| hypothetical protein VITISV_000699 [Vitis vinifera]   185   6e-45
ref|XP_002308773.1| predicted protein [Populus trichocarpa] gi|2...   178   7e-43

>ref|XP_003618091.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355519426|gb|AET01050.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 828

 Score =  240 bits (612), Expect = 1e-61
 Identities = 122/167 (73%), Positives = 142/167 (85%), Gaps = 1/167 (0%)
 Frame = +3

Query: 93  KQKEWNKAISTSIRSRLSKLCQQGQPHLARHLLETLPRPSTVVWNSVIIGFICNNMPLEA 272
           KQK+WNKAISTSIRSRLSKLC++GQPHLA HLL++LPRPSTVVWNSVIIGFICNN+P +A
Sbjct: 40  KQKQWNKAISTSIRSRLSKLCREGQPHLALHLLDSLPRPSTVVWNSVIIGFICNNLPHQA 99

Query: 273 LLLYSQMRSTPN-TRFDPYTFSSTLKACALTHDLISGKALHAHFLRSQSNPISNPGPSRI 449
           LLLY++MRS  + + FDPYTFSSTLKACALT D+++GKA+H+HFLRS SN  +N GPSRI
Sbjct: 100 LLLYAKMRSNSSCSTFDPYTFSSTLKACALTKDILTGKAIHSHFLRSHSN--TNTGPSRI 157

Query: 450 VYNSLLNMYSSCLPLTTATLLPQHDYVLKVFGVMRSKRNVVAWNTLI 590
           VYNSLLNMY+SC          QH+Y L VF VMR +RNVVAWNTLI
Sbjct: 158 VYNSLLNMYASC----------QHEYALNVFDVMR-RRNVVAWNTLI 193



 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 40/138 (28%), Positives = 69/138 (50%)
 Frame = +3

Query: 177 ARHLLETLPRPSTVVWNSVIIGFICNNMPLEALLLYSQMRSTPNTRFDPYTFSSTLKACA 356
           AR + +     +T +WN++I+ ++ NN P+EA+ ++ Q   +     D  T  S L A +
Sbjct: 277 ARMVFDRCLNKNTEIWNTMIVAYVQNNCPVEAIDVFIQALESEEGVCDDVTLLSVLTAVS 336

Query: 357 LTHDLISGKALHAHFLRSQSNPISNPGPSRIVYNSLLNMYSSCLPLTTATLLPQHDYVLK 536
               +   +  HA  ++S       PG   I+ N+++ MYS C  + T+         LK
Sbjct: 337 QLQQIKLAEQFHAFVIKSL------PGSLIIILNAVMVMYSRCNHVDTS---------LK 381

Query: 537 VFGVMRSKRNVVAWNTLI 590
           VF  M  +R+ V+WNT+I
Sbjct: 382 VFDKM-LERDAVSWNTII 398


>ref|XP_003518581.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
           chloroplastic [Glycine max]
          Length = 755

 Score =  218 bits (556), Expect = 5e-55
 Identities = 114/155 (73%), Positives = 131/155 (84%)
 Frame = +3

Query: 126 SIRSRLSKLCQQGQPHLARHLLETLPRPSTVVWNSVIIGFICNNMPLEALLLYSQMRSTP 305
           SIRSRLSKLCQQGQPHLARHLL+TLPR S+ VWN+VIIGFICN+MPLEAL LY++M+S+P
Sbjct: 24  SIRSRLSKLCQQGQPHLARHLLDTLPRASSAVWNTVIIGFICNHMPLEALHLYAEMKSSP 83

Query: 306 NTRFDPYTFSSTLKACALTHDLISGKALHAHFLRSQSNPISNPGPSRIVYNSLLNMYSSC 485
           +T  D YTFSSTLKAC+LT +L++GKA+H+HFLRSQSN       SRIVYNSLLNMYS C
Sbjct: 84  DTPSDCYTFSSTLKACSLTQNLLAGKAIHSHFLRSQSN-------SRIVYNSLLNMYSVC 136

Query: 486 LPLTTATLLPQHDYVLKVFGVMRSKRNVVAWNTLI 590
           LP   +T+  Q DYVLKVF  MR KRNVVAWNTLI
Sbjct: 137 LP--PSTVQSQLDYVLKVFAFMR-KRNVVAWNTLI 168



 Score = 61.6 bits (148), Expect = 9e-08
 Identities = 45/156 (28%), Positives = 77/156 (49%), Gaps = 1/156 (0%)
 Frame = +3

Query: 126 SIRSRLSKLCQQGQPHLARHLLETLPRPSTVVWNSVIIGFICNNMPLEALLLYSQMRSTP 305
           ++ S +      G    AR + +     +T VWN++I G++ NN PL+ + ++ +   + 
Sbjct: 232 AVSSAIVMFADLGCLDYARMVFDRCSNKNTEVWNTMIGGYVQNNCPLQGIDVFLRALESE 291

Query: 306 NTRFDPYTFSSTLKACALTHDLISGKALHAHFLRSQS-NPISNPGPSRIVYNSLLNMYSS 482
               D  TF S + A +L   +   + LHA  L+S +  P+       IV N+++ MYS 
Sbjct: 292 EAVCDEVTFLSVICAVSLLQQIKLAQQLHAFVLKSLAVTPV-------IVVNAIMVMYSR 344

Query: 483 CLPLTTATLLPQHDYVLKVFGVMRSKRNVVAWNTLI 590
           C  + T+         LKVF  M  +R+ V+WNT+I
Sbjct: 345 CNFVDTS---------LKVFDNM-PQRDAVSWNTII 370


>ref|XP_002265138.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
           chloroplastic [Vitis vinifera]
          Length = 825

 Score =  185 bits (469), Expect = 6e-45
 Identities = 97/159 (61%), Positives = 117/159 (73%), Gaps = 4/159 (2%)
 Frame = +3

Query: 126 SIRSRLSKLCQQGQPHLARHLLETLPRPSTVVWNSVIIGFICNNMPLEALLLYSQMRSTP 305
           +IRSRLS LC+QG PH A HL +++PRP+TV+WN++IIGFICNNMP++ALL Y++MR++P
Sbjct: 39  TIRSRLSHLCRQGHPHQALHLFDSIPRPTTVLWNTIIIGFICNNMPIDALLFYARMRASP 98

Query: 306 NTRFDPYTFSSTLKACALTHDLISGKALHAHFLRSQSNPISNPGPSRIVYNSLLNMYSSC 485
           + +FD YTFSSTLKACA    L  GKALH H LRS        G SRIVYNSLLNMYS+C
Sbjct: 99  SPKFDSYTFSSTLKACAQARSLKLGKALHCHVLRSHF------GSSRIVYNSLLNMYSTC 152

Query: 486 LP----LTTATLLPQHDYVLKVFGVMRSKRNVVAWNTLI 590
           L     L TA      D V +VF  MR KRNVVAWNT+I
Sbjct: 153 LTEVPYLGTAYDFNNCDLVRRVFDTMR-KRNVVAWNTMI 190



 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 46/154 (29%), Positives = 77/154 (50%)
 Frame = +3

Query: 129 IRSRLSKLCQQGQPHLARHLLETLPRPSTVVWNSVIIGFICNNMPLEALLLYSQMRSTPN 308
           + S +    + G    AR + +     +T VWN++I G++ NN P+EA+ L+ Q+  +  
Sbjct: 258 VSSAIFMYAELGCVDFAREIFDCCLERNTEVWNTMIGGYVQNNCPIEAIDLFVQVMESEQ 317

Query: 309 TRFDPYTFSSTLKACALTHDLISGKALHAHFLRSQSNPISNPGPSRIVYNSLLNMYSSCL 488
              D  TF S L A +    L  G+ LHA+ L+S +          ++ N+++ MYS C 
Sbjct: 318 FVLDDVTFLSALTAISQLQWLELGRQLHAYILKSSTI------LQVVILNAIIVMYSRCG 371

Query: 489 PLTTATLLPQHDYVLKVFGVMRSKRNVVAWNTLI 590
            + T+          KVF  M  +R+VV WNT++
Sbjct: 372 SIGTS---------FKVFSNM-LERDVVTWNTMV 395


>emb|CAN67593.1| hypothetical protein VITISV_000699 [Vitis vinifera]
          Length = 825

 Score =  185 bits (469), Expect = 6e-45
 Identities = 97/159 (61%), Positives = 117/159 (73%), Gaps = 4/159 (2%)
 Frame = +3

Query: 126 SIRSRLSKLCQQGQPHLARHLLETLPRPSTVVWNSVIIGFICNNMPLEALLLYSQMRSTP 305
           +IRSRLS LC+QG PH A HL +++PRP+TV+WN++IIGFICNNMP++ALL Y++MR++P
Sbjct: 39  TIRSRLSHLCRQGHPHQALHLFDSIPRPTTVLWNTIIIGFICNNMPIDALLFYARMRASP 98

Query: 306 NTRFDPYTFSSTLKACALTHDLISGKALHAHFLRSQSNPISNPGPSRIVYNSLLNMYSSC 485
           + +FD YTFSSTLKACA    L  GKALH H LRS        G SRIVYNSLLNMYS+C
Sbjct: 99  SPKFDSYTFSSTLKACAQARSLKLGKALHCHVLRSHF------GSSRIVYNSLLNMYSTC 152

Query: 486 LP----LTTATLLPQHDYVLKVFGVMRSKRNVVAWNTLI 590
           L     L TA      D V +VF  MR KRNVVAWNT+I
Sbjct: 153 LTEVPYLGTAYDFNNCDLVRRVFDTMR-KRNVVAWNTMI 190



 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 46/154 (29%), Positives = 77/154 (50%)
 Frame = +3

Query: 129 IRSRLSKLCQQGQPHLARHLLETLPRPSTVVWNSVIIGFICNNMPLEALLLYSQMRSTPN 308
           + S +    + G    AR + +     +T VWN++I G++ NN P+EA+ L+ Q+  +  
Sbjct: 258 VSSAIFMYAELGCVDFAREIFDCCLERNTEVWNTMIGGYVQNNCPIEAIDLFVQVMESEQ 317

Query: 309 TRFDPYTFSSTLKACALTHDLISGKALHAHFLRSQSNPISNPGPSRIVYNSLLNMYSSCL 488
              D  TF S L A +    L  G+ LHA+ L+S +          ++ N+++ MYS C 
Sbjct: 318 FXLDDVTFLSALTAISQLQWLDLGRQLHAYILKSSTI------LQVVILNAIIVMYSRCG 371

Query: 489 PLTTATLLPQHDYVLKVFGVMRSKRNVVAWNTLI 590
            + T+          KVF  M  +R+VV WNT++
Sbjct: 372 SIGTS---------FKVFSNM-LERDVVTWNTMV 395


>ref|XP_002308773.1| predicted protein [Populus trichocarpa] gi|222854749|gb|EEE92296.1|
           predicted protein [Populus trichocarpa]
          Length = 465

 Score =  178 bits (451), Expect = 7e-43
 Identities = 94/159 (59%), Positives = 118/159 (74%), Gaps = 4/159 (2%)
 Frame = +3

Query: 126 SIRSRLSKLCQQGQPHLARHLLETLPRPSTVVWNSVIIGFICNNMPLEALLLYSQMRSTP 305
           SIRSRLSKLCQ+GQPH+A  L +T PRP+TV+ N++IIGFICNN+PLEA+L YS+++S+ 
Sbjct: 44  SIRSRLSKLCQEGQPHIALQLFDTFPRPTTVICNTIIIGFICNNLPLEAILFYSKLKSSS 103

Query: 306 -NTRFDPYTFSSTLKACALTHDLISGKALHAHFLRSQSNPISNPGPSRIVYNSLLNMYSS 482
             T+FD YT+SSTLKACA T  L  G+A+H H +R  SN      PSRIVYNSLLNMYSS
Sbjct: 104 LGTKFDSYTYSSTLKACAETRSLKIGRAIHCHLIRCLSN------PSRIVYNSLLNMYSS 157

Query: 483 CLP---LTTATLLPQHDYVLKVFGVMRSKRNVVAWNTLI 590
           CL      +     ++D V KVF  MR KR+VVAWNT++
Sbjct: 158 CLSNVGCLSYLDYSKYDLVHKVFDTMR-KRDVVAWNTMV 195



 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 41/155 (26%), Positives = 76/155 (49%), Gaps = 1/155 (0%)
 Frame = +3

Query: 129 IRSRLSKLCQQGQPHLARHLLETLPRPSTVVWNSVIIGFICNNMPLEALLLYSQMRSTPN 308
           + S +    + G    AR + +     +T +WN++I G++ NN+ +E + L+ +   T  
Sbjct: 263 VSSAIFMFAELGHIDFARKVFDHCLEKNTEIWNTMIGGYVQNNLLIEGIDLFLKAVETEQ 322

Query: 309 TRFDPYTFSSTLKACALTHDLISGKALHAHFLRSQS-NPISNPGPSRIVYNSLLNMYSSC 485
           T  D  TF S L A +    L   +  HA  +++ +  P+       ++ N+++ MYS C
Sbjct: 323 TVLDDVTFLSVLTAVSQLQCLDLAQQQHAFVIKNLAVFPV-------MITNAIIVMYSRC 375

Query: 486 LPLTTATLLPQHDYVLKVFGVMRSKRNVVAWNTLI 590
             + T+          +VF  M  +R+VV+WNT+I
Sbjct: 376 NSVHTS---------FEVFEKM-VERDVVSWNTMI 400