BLASTX nr result
ID: Glycyrrhiza24_contig00020841
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza24_contig00020841 (684 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003525676.1| PREDICTED: nuclear pore membrane glycoprotei... 145 6e-33 emb|CBI34863.3| unnamed protein product [Vitis vinifera] 123 3e-26 ref|XP_004164733.1| PREDICTED: nuclear pore membrane glycoprotei... 110 2e-22 ref|XP_002272790.2| PREDICTED: nuclear pore membrane glycoprotei... 109 4e-22 ref|XP_004141110.1| PREDICTED: LOW QUALITY PROTEIN: nuclear pore... 103 4e-20 >ref|XP_003525676.1| PREDICTED: nuclear pore membrane glycoprotein 210-like [Glycine max] Length = 2304 Score = 145 bits (367), Expect = 6e-33 Identities = 84/150 (56%), Positives = 94/150 (62%), Gaps = 1/150 (0%) Frame = -3 Query: 682 RYEVKLLKAERFKDKIIITLPANGQRMEIDINHXXXXXXXXXXXALSSVTVNKXXXXXXX 503 RYEVKLLKA+RFKD+IIITLPANGQ +EIDINH SSVT+NK Sbjct: 1834 RYEVKLLKAKRFKDRIIITLPANGQSVEIDINHEPEETAS------SSVTINKAFWASIL 1887 Query: 502 XXXXXXXXXXXIFVRFLERPDRSQQXXXXXXXXXXXXXXXXXPDRSSPG-VVNEMSPRTP 326 I RFL+RP+RSQQ DRS+P VVN+ SPRTP Sbjct: 1888 GYLLLLILSIAIITRFLDRPERSQQTSSSVTTTPSIAAPTTP-DRSTPSSVVNDSSPRTP 1946 Query: 325 QPFVDYVRRTIDETPYYKREARRRVNPQNT 236 QPFVDYVR+TIDETPYYKRE RRR+NPQNT Sbjct: 1947 QPFVDYVRKTIDETPYYKREGRRRINPQNT 1976 >emb|CBI34863.3| unnamed protein product [Vitis vinifera] Length = 1961 Score = 123 bits (309), Expect = 3e-26 Identities = 69/150 (46%), Positives = 88/150 (58%) Frame = -3 Query: 682 RYEVKLLKAERFKDKIIITLPANGQRMEIDINHXXXXXXXXXXXALSSVTVNKXXXXXXX 503 +YEVK+L+A++FKDK++ITLPANGQR+E+D+++ S TV Sbjct: 1821 KYEVKVLQAKKFKDKVVITLPANGQRVELDVSYDPGERAY------SVSTVKVTLWAGVV 1874 Query: 502 XXXXXXXXXXXIFVRFLERPDRSQQXXXXXXXXXXXXXXXXXPDRSSPGVVNEMSPRTPQ 323 IF+ FL+RPDR++ DR SP V N+ SPRTPQ Sbjct: 1875 GCIALLLLTLAIFIFFLDRPDRARPSNPPANSSIVAPTTP---DRRSPAVQNDSSPRTPQ 1931 Query: 322 PFVDYVRRTIDETPYYKREARRRVNPQNTF 233 PFV+YVRRTI ETPYY RE RRRVNPQNT+ Sbjct: 1932 PFVEYVRRTIHETPYYTREGRRRVNPQNTY 1961 >ref|XP_004164733.1| PREDICTED: nuclear pore membrane glycoprotein 210-like [Cucumis sativus] Length = 203 Score = 110 bits (276), Expect = 2e-22 Identities = 67/152 (44%), Positives = 82/152 (53%), Gaps = 3/152 (1%) Frame = -3 Query: 679 YEVKLLKAERFKDKIIITLPANGQRMEIDINHXXXXXXXXXXXALSSVTVNKXXXXXXXX 500 YEVK + +RF+DKI+ITL ANGQR EID+ + +V Sbjct: 57 YEVKAMGTKRFRDKILITLAANGQRTEIDVVYDPGEKEAS-----ETVFDTTTIWATVLG 111 Query: 499 XXXXXXXXXXIFVRFLERPDR---SQQXXXXXXXXXXXXXXXXXPDRSSPGVVNEMSPRT 329 +F+ +L++P+R SQ PDRSSP + NE SPRT Sbjct: 112 SLSLLILTITLFICYLDKPNRAQPSQPSWPLATTHTPTVAAPRTPDRSSPVISNEQSPRT 171 Query: 328 PQPFVDYVRRTIDETPYYKREARRRVNPQNTF 233 PQPFVDYVR+TIDETPYYKRE RRR N QNTF Sbjct: 172 PQPFVDYVRQTIDETPYYKREGRRRFNVQNTF 203 >ref|XP_002272790.2| PREDICTED: nuclear pore membrane glycoprotein 210-like [Vitis vinifera] Length = 2363 Score = 109 bits (273), Expect = 4e-22 Identities = 63/143 (44%), Positives = 81/143 (56%) Frame = -3 Query: 682 RYEVKLLKAERFKDKIIITLPANGQRMEIDINHXXXXXXXXXXXALSSVTVNKXXXXXXX 503 +YEVK+L+A++FKDK++ITLPANGQR+E+D+++ S TV Sbjct: 1895 KYEVKVLQAKKFKDKVVITLPANGQRVELDVSYDPGERAY------SVSTVKVTLWAGVV 1948 Query: 502 XXXXXXXXXXXIFVRFLERPDRSQQXXXXXXXXXXXXXXXXXPDRSSPGVVNEMSPRTPQ 323 IF+ FL+RPDR++ DR SP V N+ SPRTPQ Sbjct: 1949 GCIALLLLTLAIFIFFLDRPDRARPSNPPANSSIVAPTTP---DRRSPAVQNDSSPRTPQ 2005 Query: 322 PFVDYVRRTIDETPYYKREARRR 254 PFV+YVRRTI ETPYY RE RRR Sbjct: 2006 PFVEYVRRTIHETPYYTREGRRR 2028 >ref|XP_004141110.1| PREDICTED: LOW QUALITY PROTEIN: nuclear pore membrane glycoprotein 210-like [Cucumis sativus] Length = 2257 Score = 103 bits (256), Expect = 4e-20 Identities = 63/147 (42%), Positives = 78/147 (53%), Gaps = 3/147 (2%) Frame = -3 Query: 679 YEVKLLKAERFKDKIIITLPANGQRMEIDINHXXXXXXXXXXXALSSVTVNKXXXXXXXX 500 YEVK + +RF+DKI+ITL ANGQR EID+ + +V Sbjct: 1779 YEVKAMGTKRFRDKILITLAANGQRTEIDVVYDPGEKEAS-----ETVFDTTTIWATVLG 1833 Query: 499 XXXXXXXXXXIFVRFLERPDR---SQQXXXXXXXXXXXXXXXXXPDRSSPGVVNEMSPRT 329 +F+ +L++P+R SQ PDRSSP + NE SPRT Sbjct: 1834 SLSLLILTITLFICYLDKPNRAQPSQPSWPLATTHTPTVAAPRTPDRSSPVISNEQSPRT 1893 Query: 328 PQPFVDYVRRTIDETPYYKREARRRVN 248 PQPFVDYVR+TIDETPYYKRE RRR N Sbjct: 1894 PQPFVDYVRQTIDETPYYKREGRRRFN 1920