BLASTX nr result

ID: Glycyrrhiza24_contig00020841 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00020841
         (684 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003525676.1| PREDICTED: nuclear pore membrane glycoprotei...   145   6e-33
emb|CBI34863.3| unnamed protein product [Vitis vinifera]              123   3e-26
ref|XP_004164733.1| PREDICTED: nuclear pore membrane glycoprotei...   110   2e-22
ref|XP_002272790.2| PREDICTED: nuclear pore membrane glycoprotei...   109   4e-22
ref|XP_004141110.1| PREDICTED: LOW QUALITY PROTEIN: nuclear pore...   103   4e-20

>ref|XP_003525676.1| PREDICTED: nuclear pore membrane glycoprotein 210-like [Glycine max]
          Length = 2304

 Score =  145 bits (367), Expect = 6e-33
 Identities = 84/150 (56%), Positives = 94/150 (62%), Gaps = 1/150 (0%)
 Frame = -3

Query: 682  RYEVKLLKAERFKDKIIITLPANGQRMEIDINHXXXXXXXXXXXALSSVTVNKXXXXXXX 503
            RYEVKLLKA+RFKD+IIITLPANGQ +EIDINH             SSVT+NK       
Sbjct: 1834 RYEVKLLKAKRFKDRIIITLPANGQSVEIDINHEPEETAS------SSVTINKAFWASIL 1887

Query: 502  XXXXXXXXXXXIFVRFLERPDRSQQXXXXXXXXXXXXXXXXXPDRSSPG-VVNEMSPRTP 326
                       I  RFL+RP+RSQQ                  DRS+P  VVN+ SPRTP
Sbjct: 1888 GYLLLLILSIAIITRFLDRPERSQQTSSSVTTTPSIAAPTTP-DRSTPSSVVNDSSPRTP 1946

Query: 325  QPFVDYVRRTIDETPYYKREARRRVNPQNT 236
            QPFVDYVR+TIDETPYYKRE RRR+NPQNT
Sbjct: 1947 QPFVDYVRKTIDETPYYKREGRRRINPQNT 1976


>emb|CBI34863.3| unnamed protein product [Vitis vinifera]
          Length = 1961

 Score =  123 bits (309), Expect = 3e-26
 Identities = 69/150 (46%), Positives = 88/150 (58%)
 Frame = -3

Query: 682  RYEVKLLKAERFKDKIIITLPANGQRMEIDINHXXXXXXXXXXXALSSVTVNKXXXXXXX 503
            +YEVK+L+A++FKDK++ITLPANGQR+E+D+++             S  TV         
Sbjct: 1821 KYEVKVLQAKKFKDKVVITLPANGQRVELDVSYDPGERAY------SVSTVKVTLWAGVV 1874

Query: 502  XXXXXXXXXXXIFVRFLERPDRSQQXXXXXXXXXXXXXXXXXPDRSSPGVVNEMSPRTPQ 323
                       IF+ FL+RPDR++                   DR SP V N+ SPRTPQ
Sbjct: 1875 GCIALLLLTLAIFIFFLDRPDRARPSNPPANSSIVAPTTP---DRRSPAVQNDSSPRTPQ 1931

Query: 322  PFVDYVRRTIDETPYYKREARRRVNPQNTF 233
            PFV+YVRRTI ETPYY RE RRRVNPQNT+
Sbjct: 1932 PFVEYVRRTIHETPYYTREGRRRVNPQNTY 1961


>ref|XP_004164733.1| PREDICTED: nuclear pore membrane glycoprotein 210-like [Cucumis
           sativus]
          Length = 203

 Score =  110 bits (276), Expect = 2e-22
 Identities = 67/152 (44%), Positives = 82/152 (53%), Gaps = 3/152 (1%)
 Frame = -3

Query: 679 YEVKLLKAERFKDKIIITLPANGQRMEIDINHXXXXXXXXXXXALSSVTVNKXXXXXXXX 500
           YEVK +  +RF+DKI+ITL ANGQR EID+ +              +V            
Sbjct: 57  YEVKAMGTKRFRDKILITLAANGQRTEIDVVYDPGEKEAS-----ETVFDTTTIWATVLG 111

Query: 499 XXXXXXXXXXIFVRFLERPDR---SQQXXXXXXXXXXXXXXXXXPDRSSPGVVNEMSPRT 329
                     +F+ +L++P+R   SQ                  PDRSSP + NE SPRT
Sbjct: 112 SLSLLILTITLFICYLDKPNRAQPSQPSWPLATTHTPTVAAPRTPDRSSPVISNEQSPRT 171

Query: 328 PQPFVDYVRRTIDETPYYKREARRRVNPQNTF 233
           PQPFVDYVR+TIDETPYYKRE RRR N QNTF
Sbjct: 172 PQPFVDYVRQTIDETPYYKREGRRRFNVQNTF 203


>ref|XP_002272790.2| PREDICTED: nuclear pore membrane glycoprotein 210-like [Vitis
            vinifera]
          Length = 2363

 Score =  109 bits (273), Expect = 4e-22
 Identities = 63/143 (44%), Positives = 81/143 (56%)
 Frame = -3

Query: 682  RYEVKLLKAERFKDKIIITLPANGQRMEIDINHXXXXXXXXXXXALSSVTVNKXXXXXXX 503
            +YEVK+L+A++FKDK++ITLPANGQR+E+D+++             S  TV         
Sbjct: 1895 KYEVKVLQAKKFKDKVVITLPANGQRVELDVSYDPGERAY------SVSTVKVTLWAGVV 1948

Query: 502  XXXXXXXXXXXIFVRFLERPDRSQQXXXXXXXXXXXXXXXXXPDRSSPGVVNEMSPRTPQ 323
                       IF+ FL+RPDR++                   DR SP V N+ SPRTPQ
Sbjct: 1949 GCIALLLLTLAIFIFFLDRPDRARPSNPPANSSIVAPTTP---DRRSPAVQNDSSPRTPQ 2005

Query: 322  PFVDYVRRTIDETPYYKREARRR 254
            PFV+YVRRTI ETPYY RE RRR
Sbjct: 2006 PFVEYVRRTIHETPYYTREGRRR 2028


>ref|XP_004141110.1| PREDICTED: LOW QUALITY PROTEIN: nuclear pore membrane glycoprotein
            210-like [Cucumis sativus]
          Length = 2257

 Score =  103 bits (256), Expect = 4e-20
 Identities = 63/147 (42%), Positives = 78/147 (53%), Gaps = 3/147 (2%)
 Frame = -3

Query: 679  YEVKLLKAERFKDKIIITLPANGQRMEIDINHXXXXXXXXXXXALSSVTVNKXXXXXXXX 500
            YEVK +  +RF+DKI+ITL ANGQR EID+ +              +V            
Sbjct: 1779 YEVKAMGTKRFRDKILITLAANGQRTEIDVVYDPGEKEAS-----ETVFDTTTIWATVLG 1833

Query: 499  XXXXXXXXXXIFVRFLERPDR---SQQXXXXXXXXXXXXXXXXXPDRSSPGVVNEMSPRT 329
                      +F+ +L++P+R   SQ                  PDRSSP + NE SPRT
Sbjct: 1834 SLSLLILTITLFICYLDKPNRAQPSQPSWPLATTHTPTVAAPRTPDRSSPVISNEQSPRT 1893

Query: 328  PQPFVDYVRRTIDETPYYKREARRRVN 248
            PQPFVDYVR+TIDETPYYKRE RRR N
Sbjct: 1894 PQPFVDYVRQTIDETPYYKREGRRRFN 1920


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