BLASTX nr result

ID: Glycyrrhiza24_contig00020836 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00020836
         (800 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN08716.1| SAM (and some other nucleotide) binding motif [Me...   244   1e-62
ref|XP_003543023.1| PREDICTED: tRNA (adenine-N(1)-)-methyltransf...   233   3e-59
ref|XP_002521442.1| tRNA, putative [Ricinus communis] gi|2235393...   230   2e-58
ref|XP_002273877.1| PREDICTED: tRNA (adenine-N(1)-)-methyltransf...   219   7e-55
ref|XP_004135565.1| PREDICTED: tRNA (adenine(58)-N(1))-methyltra...   213   3e-53

>gb|ABN08716.1| SAM (and some other nucleotide) binding motif [Medicago truncatula]
          Length = 307

 Score =  244 bits (624), Expect = 1e-62
 Identities = 123/160 (76%), Positives = 132/160 (82%)
 Frame = -3

Query: 798 SARDDFERTGLSSLVSVGVRDIQGEGFPDEXXXXXXXXXXXLPQPWLAVPSAAKMLKQDG 619
           SARDDFER GLSSL+S GVRDIQGEGFPDE           LPQPWLA+PSAAKMLKQDG
Sbjct: 149 SARDDFERIGLSSLISCGVRDIQGEGFPDELNELADSVFLDLPQPWLAIPSAAKMLKQDG 208

Query: 618 TLCSFSPCIEQVQRSCETLRTSFTDIRTFEVLLRTYEVREGKMESLPGNENGSNGSLPCK 439
           T CSFSPCIEQVQRSC+ L++ FTDIRTFEVLLRTYEVRE K +S  G++   NGSLPCK
Sbjct: 209 TFCSFSPCIEQVQRSCDALQSCFTDIRTFEVLLRTYEVREVKTKSFHGDD---NGSLPCK 265

Query: 438 RRQCSDGGNVPSSPISSVMARPCGEARGHTGYLTFARLKC 319
           RRQCSDG  V S+P SSVMARPC EARGHTGYLTFARLKC
Sbjct: 266 RRQCSDGNYVLSNPTSSVMARPCDEARGHTGYLTFARLKC 305


>ref|XP_003543023.1| PREDICTED: tRNA (adenine-N(1)-)-methyltransferase catalytic subunit
           TRMT61A-like [Glycine max]
          Length = 309

 Score =  233 bits (595), Expect = 3e-59
 Identities = 124/164 (75%), Positives = 132/164 (80%), Gaps = 3/164 (1%)
 Frame = -3

Query: 798 SARDDFERTGLSSLVSVGVRDIQGEGFPDEXXXXXXXXXXXLPQPWLAVPSAAKMLKQDG 619
           SAR DFERTGLSSLV+V VRDIQGEGFPD            LPQPWL +PSAAK+L+ DG
Sbjct: 148 SARADFERTGLSSLVTVQVRDIQGEGFPDTFTGMADSVFLDLPQPWLVIPSAAKVLRHDG 207

Query: 618 TLCSFSPCIEQVQRSCETLRTSFTDIRTFEVLLRTYEVREGKMESLPGNENGSNGSLPCK 439
           TLCSFSPCIEQVQR+CETLRT FTDIRTFEVLLRTYEVRE KM+SL G+    NGSLP K
Sbjct: 208 TLCSFSPCIEQVQRTCETLRTCFTDIRTFEVLLRTYEVREEKMQSLCGD---GNGSLPSK 264

Query: 438 RRQCSDGGNVPSS---PISSVMARPCGEARGHTGYLTFARLKCL 316
           RRQCSDG  V SS    ISSVMARPCGEARGHTGYLTFAR+K L
Sbjct: 265 RRQCSDGSYVLSSSSPSISSVMARPCGEARGHTGYLTFARVKSL 308


>ref|XP_002521442.1| tRNA, putative [Ricinus communis] gi|223539341|gb|EEF40932.1| tRNA,
           putative [Ricinus communis]
          Length = 311

 Score =  230 bits (587), Expect = 2e-58
 Identities = 121/163 (74%), Positives = 133/163 (81%), Gaps = 2/163 (1%)
 Frame = -3

Query: 798 SARDDFERTGLSSLVSVGVRDIQGEGFPDEXXXXXXXXXXXLPQPWLAVPSAAKMLKQDG 619
           SAR+DFE+TG+SSLV+VGVRDIQGEGFPDE           LPQPWLA+PSAAKMLKQDG
Sbjct: 148 SAREDFEKTGVSSLVTVGVRDIQGEGFPDEYSGLVDSVFLDLPQPWLAIPSAAKMLKQDG 207

Query: 618 TLCSFSPCIEQVQRSCETLRTSFTDIRTFEVLLRTYEVREGKMESLPGNENGSNGSLPCK 439
            LCSFSPCIEQVQRSCETLR++FTDIRTFEVLLRTYEVRE KM+   G E  S GS P K
Sbjct: 208 VLCSFSPCIEQVQRSCETLRSNFTDIRTFEVLLRTYEVREVKMDCGQGEEGISLGSPPYK 267

Query: 438 RRQ-CSDGGNVPSSPISSV-MARPCGEARGHTGYLTFARLKCL 316
           RRQ  S+G NV +S  S V MARPCG++RGHTGYLTFARLKCL
Sbjct: 268 RRQRSSEGSNVQNSSSSPVIMARPCGDSRGHTGYLTFARLKCL 310


>ref|XP_002273877.1| PREDICTED: tRNA (adenine-N(1)-)-methyltransferase catalytic subunit
           TRMT61A [Vitis vinifera]
          Length = 324

 Score =  219 bits (557), Expect = 7e-55
 Identities = 114/165 (69%), Positives = 128/165 (77%), Gaps = 4/165 (2%)
 Frame = -3

Query: 798 SARDDFERTGLSSLVSVGVRDIQGEGFPDEXXXXXXXXXXXLPQPWLAVPSAAKMLKQDG 619
           SAR+DFE+ GLSS V+VGVRDIQGEGFPDE           LPQPWLA+PSA KMLK+DG
Sbjct: 148 SAREDFEKIGLSSFVTVGVRDIQGEGFPDEFSGLADSVFLDLPQPWLAIPSAGKMLKEDG 207

Query: 618 TLCSFSPCIEQVQRSCETLRTSFTDIRTFEVLLRTYEVREGKMESLPGNENGSNGSLPCK 439
            LCSFSPCIEQVQRS ETL ++FTDIRTFEVLLRTYEVREGKM+   GNE G  G  P K
Sbjct: 208 VLCSFSPCIEQVQRSSETLTSNFTDIRTFEVLLRTYEVREGKMDCSQGNEGGFLGPRPGK 267

Query: 438 RRQ----CSDGGNVPSSPISSVMARPCGEARGHTGYLTFARLKCL 316
           RRQ     S+ G +P+S  ++VMARP  EARGHTG+LTFARLKCL
Sbjct: 268 RRQRSGEASNEGEIPTS--TTVMARPAAEARGHTGFLTFARLKCL 310


>ref|XP_004135565.1| PREDICTED: tRNA (adenine(58)-N(1))-methyltransferase catalytic
           subunit TRMT61A-like [Cucumis sativus]
           gi|449528672|ref|XP_004171327.1| PREDICTED: tRNA
           (adenine(58)-N(1))-methyltransferase catalytic subunit
           TRMT61A-like [Cucumis sativus]
          Length = 310

 Score =  213 bits (543), Expect = 3e-53
 Identities = 107/162 (66%), Positives = 127/162 (78%), Gaps = 1/162 (0%)
 Frame = -3

Query: 798 SARDDFERTGLSSLVSVGVRDIQGEGFPDEXXXXXXXXXXXLPQPWLAVPSAAKMLKQDG 619
           SAR+DFE+TGL+SLV+VGVRDIQG+GFP+E           LPQPWLA+PSA +MLKQDG
Sbjct: 148 SAREDFEKTGLTSLVTVGVRDIQGQGFPEEFVGLADSVFLDLPQPWLAIPSAERMLKQDG 207

Query: 618 TLCSFSPCIEQVQRSCETLRTSFTDIRTFEVLLRTYEVREGKMESLPGNENGSNGSLPCK 439
            LCSFSPCIEQVQRS ETLR+ FTDIRTFEVLLRTYEV+EG+ ES   +  GS G  PCK
Sbjct: 208 MLCSFSPCIEQVQRSVETLRSKFTDIRTFEVLLRTYEVKEGRTESNQVDGGGSVGLPPCK 267

Query: 438 RR-QCSDGGNVPSSPISSVMARPCGEARGHTGYLTFARLKCL 316
           RR +  +  ++ +   ++VM RPC EARGHTGYLTFARL+CL
Sbjct: 268 RRLRSKESDDMDNESSTTVMVRPCSEARGHTGYLTFARLRCL 309


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