BLASTX nr result

ID: Glycyrrhiza24_contig00020832 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00020832
         (361 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003626193.1| F-box protein PP2-B3 [Medicago truncatula] g...   144   1e-32
ref|XP_003554629.1| PREDICTED: F-box protein PP2-B15-like [Glyci...   133   2e-29
ref|XP_003521677.1| PREDICTED: F-box protein PP2-B15-like [Glyci...   130   1e-28
ref|XP_002283524.1| PREDICTED: F-box protein PP2-B15-like [Vitis...   105   5e-21
emb|CAN65691.1| hypothetical protein VITISV_022467 [Vitis vinifera]   105   5e-21

>ref|XP_003626193.1| F-box protein PP2-B3 [Medicago truncatula]
           gi|355501208|gb|AES82411.1| F-box protein PP2-B3
           [Medicago truncatula]
          Length = 285

 Score =  144 bits (362), Expect = 1e-32
 Identities = 73/92 (79%), Positives = 80/92 (86%)
 Frame = +1

Query: 1   GRAYLGHKDENKRKMEALFYGNRRNRVVQDQEDHGEGVIPLPSKREEDGWMEIELGEFFS 180
           G+AYL  KDENKR ME LFYGNRRNRV+Q+QED G   I +PSKRE DGWMEIE+GEFFS
Sbjct: 195 GKAYLCIKDENKRNMETLFYGNRRNRVIQEQEDGGN--IQVPSKRE-DGWMEIEIGEFFS 251

Query: 181 GEGDEEIKMSLTEVSYQLKGGLVLEGIEVRPK 276
           GEGDEEIKMSL E+ +QLKGGLVLEGIEVRPK
Sbjct: 252 GEGDEEIKMSLMEIGHQLKGGLVLEGIEVRPK 283


>ref|XP_003554629.1| PREDICTED: F-box protein PP2-B15-like [Glycine max]
          Length = 287

 Score =  133 bits (334), Expect = 2e-29
 Identities = 72/96 (75%), Positives = 76/96 (79%), Gaps = 4/96 (4%)
 Frame = +1

Query: 1   GRAYLGHKDENKRKMEALFYGNR----RNRVVQDQEDHGEGVIPLPSKREEDGWMEIELG 168
           G+AYLG KDENKR+MEALFYGNR    RN   Q+        IP PSKRE DGWMEIELG
Sbjct: 198 GKAYLGDKDENKREMEALFYGNRTEVLRNAAFQEG-------IPFPSKRE-DGWMEIELG 249

Query: 169 EFFSGEGDEEIKMSLTEVSYQLKGGLVLEGIEVRPK 276
           EFFSGEGDEEIKMSL EV YQLKGGLVLEGI+VRPK
Sbjct: 250 EFFSGEGDEEIKMSLREVGYQLKGGLVLEGIQVRPK 285


>ref|XP_003521677.1| PREDICTED: F-box protein PP2-B15-like [Glycine max]
          Length = 284

 Score =  130 bits (327), Expect = 1e-28
 Identities = 68/92 (73%), Positives = 73/92 (79%)
 Frame = +1

Query: 1   GRAYLGHKDENKRKMEALFYGNRRNRVVQDQEDHGEGVIPLPSKREEDGWMEIELGEFFS 180
           G+AYLGHKDENKRKME LFYGNR   +     D G   I  PSKRE DGWMEIELGEFF+
Sbjct: 196 GKAYLGHKDENKRKMETLFYGNRTEVLRNAAFDEG---IASPSKRE-DGWMEIELGEFFN 251

Query: 181 GEGDEEIKMSLTEVSYQLKGGLVLEGIEVRPK 276
           GEGDEEIKM L EV YQLKGGLVLEGI++RPK
Sbjct: 252 GEGDEEIKMCLREVGYQLKGGLVLEGIQLRPK 283


>ref|XP_002283524.1| PREDICTED: F-box protein PP2-B15-like [Vitis vinifera]
          Length = 301

 Score =  105 bits (261), Expect = 5e-21
 Identities = 55/97 (56%), Positives = 71/97 (73%), Gaps = 5/97 (5%)
 Frame = +1

Query: 1   GRAYLGHKDENKRKMEALFYGNR----RNRVVQDQEDHGEGVIPLPSKREEDGWMEIELG 168
           G AYL   D   ++ME LFYGNR    R+RV++     G+G +P   +R+ DGWME+ELG
Sbjct: 207 GTAYLRCSDSKNKQMERLFYGNRGEMLRSRVIE-----GDGRVPC-ERRDGDGWMELELG 260

Query: 169 EFFSGEGDEEIKMSLTEV-SYQLKGGLVLEGIEVRPK 276
           +FF+GEGDEE++MSL EV  Y LKGGL++EGIEVRPK
Sbjct: 261 DFFNGEGDEEVRMSLREVKGYHLKGGLIIEGIEVRPK 297


>emb|CAN65691.1| hypothetical protein VITISV_022467 [Vitis vinifera]
          Length = 288

 Score =  105 bits (261), Expect = 5e-21
 Identities = 56/97 (57%), Positives = 71/97 (73%), Gaps = 5/97 (5%)
 Frame = +1

Query: 1   GRAYLGHKDENKRKMEALFYGNR----RNRVVQDQEDHGEGVIPLPSKREEDGWMEIELG 168
           G AYL   D   ++ME LFYGNR    R+RV++     G+G +P   +R+ DGWME+ELG
Sbjct: 194 GTAYLRCIDSKNKQMERLFYGNRGEMLRSRVIE-----GDGRVPC-ERRDGDGWMELELG 247

Query: 169 EFFSGEGDEEIKMSLTEV-SYQLKGGLVLEGIEVRPK 276
           +FF+GEGDEE+KMSL EV  Y LKGGL++EGIEVRPK
Sbjct: 248 DFFNGEGDEEVKMSLREVKGYHLKGGLIIEGIEVRPK 284


Top