BLASTX nr result

ID: Glycyrrhiza24_contig00020822 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00020822
         (1339 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK46902.1| unknown [Medicago truncatula]                          481   e-133
ref|XP_003540235.1| PREDICTED: pentatricopeptide repeat-containi...   465   e-128
ref|XP_003541975.1| PREDICTED: pentatricopeptide repeat-containi...   442   e-122
ref|XP_002306233.1| predicted protein [Populus trichocarpa] gi|2...   377   e-102
ref|XP_002328164.1| predicted protein [Populus trichocarpa] gi|2...   374   e-101

>gb|AFK46902.1| unknown [Medicago truncatula]
          Length = 392

 Score =  481 bits (1238), Expect = e-133
 Identities = 236/280 (84%), Positives = 254/280 (90%), Gaps = 10/280 (3%)
 Frame = -2

Query: 1299 EQLVCVDIDEEEMDKFARSIAALAVEREVKANFSEFQGWLEKHACYEAIVDGANVGLYQQ 1120
            EQLVCVDID+EEM+KFA S+AALAVEREVKANFSEFQGWLEKH CYEAIVDGANVGLYQQ
Sbjct: 113  EQLVCVDIDDEEMEKFASSVAALAVEREVKANFSEFQGWLEKHGCYEAIVDGANVGLYQQ 172

Query: 1119 NFADGGFSIYQLDDVMKELYNQSGKKWPLVILHNKRLRGLTENPSSRKLVEEWMKNGVLY 940
            NFADGGFS  QLDDV+KELYNQSG+KWPLV+LHNKR++GL ENPSSRKLVEEWMKNGVLY
Sbjct: 173  NFADGGFSTNQLDDVVKELYNQSGRKWPLVVLHNKRVKGLMENPSSRKLVEEWMKNGVLY 232

Query: 939  TTPNGSNDDWYWLYAAVKLRCLLVTNDEMRDHIFELLGSNFFNQWKERHQVHYTFVKGNL 760
            TTPNGSNDDWYWLYA VKLRCLLVTNDEMRDHIFELLGSNFFNQWKERHQVHYTFVKGNL
Sbjct: 233  TTPNGSNDDWYWLYATVKLRCLLVTNDEMRDHIFELLGSNFFNQWKERHQVHYTFVKGNL 292

Query: 759  KLQMPPSYSLVIQESEKGSWHVPLAPGTANETSRSWLCITRASADDAVATVSNGVDTSGD 580
            KLQMPP YSLVIQESEKGSWHVPLA  T+NE+S+ WLCITRASADDA  T SNGVDTSG+
Sbjct: 293  KLQMPPPYSLVIQESEKGSWHVPLAVDTSNESSKPWLCITRASADDA-TTASNGVDTSGN 351

Query: 579  S-------QRFAN---SLDSKVNENNTTSLTGKRKERSPP 490
            +       Q+ A+   SLDS+V ENN+TS+TGKRKERS P
Sbjct: 352  NHIHIDQPQKIADEVLSLDSQVIENNSTSVTGKRKERSDP 391


>ref|XP_003540235.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
            mitochondrial-like [Glycine max]
          Length = 530

 Score =  465 bits (1196), Expect = e-128
 Identities = 224/270 (82%), Positives = 241/270 (89%)
 Frame = -2

Query: 1299 EQLVCVDIDEEEMDKFARSIAALAVEREVKANFSEFQGWLEKHACYEAIVDGANVGLYQQ 1120
            EQLVCVDID+ E +KFA S+AALA EREVKANFSEFQ WLEKHA YEAIVDGAN+GLYQQ
Sbjct: 270  EQLVCVDIDDAEREKFAGSVAALAFEREVKANFSEFQAWLEKHASYEAIVDGANIGLYQQ 329

Query: 1119 NFADGGFSIYQLDDVMKELYNQSGKKWPLVILHNKRLRGLTENPSSRKLVEEWMKNGVLY 940
            NFADGGFSI QLDDV+KELYN+SGKKWPLV+LHNKRLRGL ENPSSR+LVEEWM NG LY
Sbjct: 330  NFADGGFSISQLDDVVKELYNRSGKKWPLVVLHNKRLRGLMENPSSRRLVEEWMNNGALY 389

Query: 939  TTPNGSNDDWYWLYAAVKLRCLLVTNDEMRDHIFELLGSNFFNQWKERHQVHYTFVKGNL 760
            TTPNGSNDDWYWL+AAVKLRCLLVTNDEMRDHIFEL+GSNFFNQWKERHQVHYTFVKGNL
Sbjct: 390  TTPNGSNDDWYWLFAAVKLRCLLVTNDEMRDHIFELIGSNFFNQWKERHQVHYTFVKGNL 449

Query: 759  KLQMPPSYSLVIQESEKGSWHVPLAPGTANETSRSWLCITRASADDAVATVSNGVDTSGD 580
            KLQMPPSYSLVIQESEKG WHVPLAPGT+ E++R WLCITR    D VATVSNGV     
Sbjct: 450  KLQMPPSYSLVIQESEKGYWHVPLAPGTSCESTRCWLCITRPCGHDVVATVSNGV----- 504

Query: 579  SQRFANSLDSKVNENNTTSLTGKRKERSPP 490
                 +SLDS+V+ENN TS+TGKRKERSPP
Sbjct: 505  -----SSLDSQVDENNATSVTGKRKERSPP 529


>ref|XP_003541975.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
            mitochondrial-like [Glycine max]
          Length = 550

 Score =  442 bits (1137), Expect = e-122
 Identities = 213/260 (81%), Positives = 233/260 (89%)
 Frame = -2

Query: 1299 EQLVCVDIDEEEMDKFARSIAALAVEREVKANFSEFQGWLEKHACYEAIVDGANVGLYQQ 1120
            +QLVCVDID+ E +KFA S+AALA EREVKANFSEFQ WLEKHA YEAIVDGAN+GLYQQ
Sbjct: 269  QQLVCVDIDDVETEKFAGSVAALAFEREVKANFSEFQAWLEKHASYEAIVDGANIGLYQQ 328

Query: 1119 NFADGGFSIYQLDDVMKELYNQSGKKWPLVILHNKRLRGLTENPSSRKLVEEWMKNGVLY 940
            NFADGGF+I QLDDV+KELYN+SGKKWPLV+LHNKRLRGL ENPSSR+LVEEWMKNGVLY
Sbjct: 329  NFADGGFNISQLDDVVKELYNRSGKKWPLVVLHNKRLRGLMENPSSRRLVEEWMKNGVLY 388

Query: 939  TTPNGSNDDWYWLYAAVKLRCLLVTNDEMRDHIFELLGSNFFNQWKERHQVHYTFVKGNL 760
            TTPNGSNDDWYWL+AAVKLRCLLVTNDEMRDHIFEL+GSNFFNQWKERHQVHYTFVKGNL
Sbjct: 389  TTPNGSNDDWYWLFAAVKLRCLLVTNDEMRDHIFELIGSNFFNQWKERHQVHYTFVKGNL 448

Query: 759  KLQMPPSYSLVIQESEKGSWHVPLAPGTANETSRSWLCITRASADDAVATVSNGVDTSGD 580
            KLQMPPSYSLVIQESEKG WHVPL  GT+ E++R WLCITR S  DAVATVSNGV     
Sbjct: 449  KLQMPPSYSLVIQESEKGYWHVPLVSGTSCESTRCWLCITRPSGHDAVATVSNGV----- 503

Query: 579  SQRFANSLDSKVNENNTTSL 520
                 +SLDS+V+EN+ TS+
Sbjct: 504  -----SSLDSQVDENSATSI 518


>ref|XP_002306233.1| predicted protein [Populus trichocarpa] gi|222849197|gb|EEE86744.1|
            predicted protein [Populus trichocarpa]
          Length = 557

 Score =  377 bits (967), Expect = e-102
 Identities = 191/293 (65%), Positives = 232/293 (79%), Gaps = 22/293 (7%)
 Frame = -2

Query: 1299 EQLVCVDIDEEEMDKFARSIAALAVEREVKANFSEFQGWLEKHACYEAIVDGANVGLYQQ 1120
            EQLV VDID++E ++FA S+A LA+EREVKANFSEFQ WLEKHA YEAI+DGAN+GLYQQ
Sbjct: 265  EQLVSVDIDDDETERFAESVAGLAMEREVKANFSEFQNWLEKHANYEAIMDGANIGLYQQ 324

Query: 1119 NFADGGFSI-YQLDDVMKELYNQSGKKWPLVILHNKRLRGLTENPSSRKLVEEWMKNGVL 943
            NFA+GGFSI  QLD V+K+LYNQSGKK PLVILHNKRLR L +NPS+R+L++EW++  VL
Sbjct: 325  NFAEGGFSISQQLDAVIKDLYNQSGKKGPLVILHNKRLRALLQNPSTRELIQEWIEKDVL 384

Query: 942  YTTPNGSNDDWYWLYAAVKLRCLLVTNDEMRDHIFELLGSNFFNQWKERHQVHYTFVKGN 763
            YTTP+GSNDDWYWLYAAVKLRCLLVTNDEMRDHIFELLGS+FF +WKERHQV YTFVKGN
Sbjct: 385  YTTPHGSNDDWYWLYAAVKLRCLLVTNDEMRDHIFELLGSDFFVKWKERHQVRYTFVKGN 444

Query: 762  LKLQMPPSYSLVIQESEKGSWHVPLAPGTANETSRSWLCITRASADDAVATVS------- 604
            L+LQMPP +S+VIQESE GSWHVP+A G  N++ +SWLC++R  + DA+   S       
Sbjct: 445  LELQMPPLFSIVIQESENGSWHVPVA-GDGNDSPQSWLCVSRPRSCDALKEASCMEESKD 503

Query: 603  -------NGVDTSGDSQRFA------NSLDS-KVNENNTTSLTGKRKERSPPP 487
                   + + T G  +  A      +S DS + +++  T+LTGKRKERSP P
Sbjct: 504  SNDSRCNSKLPTFGRPESLASCKHKLHSRDSFQESDDKITALTGKRKERSPSP 556


>ref|XP_002328164.1| predicted protein [Populus trichocarpa] gi|222837679|gb|EEE76044.1|
            predicted protein [Populus trichocarpa]
          Length = 557

 Score =  374 bits (959), Expect = e-101
 Identities = 189/292 (64%), Positives = 231/292 (79%), Gaps = 22/292 (7%)
 Frame = -2

Query: 1296 QLVCVDIDEEEMDKFARSIAALAVEREVKANFSEFQGWLEKHACYEAIVDGANVGLYQQN 1117
            QLV VDID++E ++FA S+A LA+EREVKANFSEFQ WLEKHA YEAI+DGAN+GLYQQN
Sbjct: 266  QLVSVDIDDDETERFAESVAGLAMEREVKANFSEFQNWLEKHANYEAIMDGANIGLYQQN 325

Query: 1116 FADGGFSI-YQLDDVMKELYNQSGKKWPLVILHNKRLRGLTENPSSRKLVEEWMKNGVLY 940
            FA+GGFSI  QLD V+K+LYNQSGKK PL+ILHNKRLR L +NPS+R+L++EW++  VLY
Sbjct: 326  FAEGGFSISQQLDAVIKDLYNQSGKKRPLIILHNKRLRALLQNPSTRELIQEWIEKDVLY 385

Query: 939  TTPNGSNDDWYWLYAAVKLRCLLVTNDEMRDHIFELLGSNFFNQWKERHQVHYTFVKGNL 760
            TTP+GSNDDWYWLYAAVKLRC LVTNDEMRDHIFELLGS+FF +WKERHQV YTFVKGNL
Sbjct: 386  TTPHGSNDDWYWLYAAVKLRCWLVTNDEMRDHIFELLGSDFFVKWKERHQVRYTFVKGNL 445

Query: 759  KLQMPPSYSLVIQESEKGSWHVPLAPGTANETSRSWLCITRASADDAVATVS-------- 604
            +LQMPP +S+VIQESE GSWHVP+A G  N++ +SWLC++R S+ DA+   S        
Sbjct: 446  ELQMPPLFSIVIQESENGSWHVPVA-GDGNDSPQSWLCVSRPSSCDALKEASCMEESKDS 504

Query: 603  ------NGVDTSGDSQRFA------NSLDS-KVNENNTTSLTGKRKERSPPP 487
                  + + T G  +  A      +S DS + +++  T+LTGKRKERSP P
Sbjct: 505  NDSRCNSKLPTFGRPESLASCKHKLHSRDSFQESDDKITALTGKRKERSPSP 556


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