BLASTX nr result

ID: Glycyrrhiza24_contig00020821 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00020821
         (266 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulga...   102   4e-20
emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulga...   100   2e-19
ref|XP_002468588.1| hypothetical protein SORBIDRAFT_01g048580 [S...    95   5e-18
gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa ...    93   2e-17
ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [S...    93   2e-17

>emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score =  102 bits (253), Expect = 4e-20
 Identities = 46/84 (54%), Positives = 58/84 (69%)
 Frame = -1

Query: 257  ISKICSSIARFWWKSKDRYRGIHWKNWESLTSHKNEGGLGFKDFAHMNSSLLAKQAWRIV 78
            I KI S++ARFWW S D  R IHWKNW+S+ + K  GG+GFKD    N +LL +QAWR+ 
Sbjct: 819  IQKIQSAMARFWWGSSDTQRKIHWKNWDSMCNLKCFGGMGFKDLTIFNDALLGRQAWRLT 878

Query: 77   KSPNSLWVKVLKALYFPYSDFLKA 6
            + P SL  +V+KA YFP  DFL A
Sbjct: 879  REPQSLLGRVMKAKYFPNCDFLNA 902


>emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 45/84 (53%), Positives = 59/84 (70%)
 Frame = -1

Query: 257  ISKICSSIARFWWKSKDRYRGIHWKNWESLTSHKNEGGLGFKDFAHMNSSLLAKQAWRIV 78
            I KI S++ARFWW S D  R IHWKNW+SL + K  GG+GF+D    N +LL +QAWR+V
Sbjct: 819  IQKIHSAMARFWWGSSDTQRRIHWKNWDSLCTLKCFGGMGFRDLRVFNDALLGRQAWRLV 878

Query: 77   KSPNSLWVKVLKALYFPYSDFLKA 6
            + P+SL  +V+KA Y+   DFL A
Sbjct: 879  REPHSLLARVMKAKYYSNHDFLDA 902


>ref|XP_002468588.1| hypothetical protein SORBIDRAFT_01g048580 [Sorghum bicolor]
           gi|241922442|gb|EER95586.1| hypothetical protein
           SORBIDRAFT_01g048580 [Sorghum bicolor]
          Length = 517

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 40/82 (48%), Positives = 56/82 (68%)
 Frame = -1

Query: 248 ICSSIARFWWKSKDRYRGIHWKNWESLTSHKNEGGLGFKDFAHMNSSLLAKQAWRIVKSP 69
           + S + R+WW  +D+   IHW +WE LT  K  GGLGF+D  H N ++LA+QAWRI+  P
Sbjct: 242 LSSMVGRYWWSEQDKTNKIHWLSWEKLTLSKKRGGLGFRDLYHFNLAMLARQAWRILIEP 301

Query: 68  NSLWVKVLKALYFPYSDFLKAK 3
           ++L  +VLKA YFP S+ L+ K
Sbjct: 302 DTLCGRVLKARYFPNSNILQCK 323


>gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1656

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 40/77 (51%), Positives = 57/77 (74%)
 Frame = -1

Query: 236  IARFWWKSKDRYRGIHWKNWESLTSHKNEGGLGFKDFAHMNSSLLAKQAWRIVKSPNSLW 57
            +A FWW + D  RGIHWK+W+ L   K +GG+GF++    N+SLLAKQAWR+ ++P +LW
Sbjct: 1431 LADFWWGNVDT-RGIHWKSWDFLARPKKDGGMGFRNLEDFNNSLLAKQAWRLHQNPFALW 1489

Query: 56   VKVLKALYFPYSDFLKA 6
             +VL+ LY+P S FL+A
Sbjct: 1490 ARVLEQLYYPRSSFLEA 1506


>ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [Sorghum bicolor]
           gi|241926916|gb|EES00061.1| hypothetical protein
           SORBIDRAFT_03g001780 [Sorghum bicolor]
          Length = 631

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 39/80 (48%), Positives = 57/80 (71%)
 Frame = -1

Query: 251 KICSSIARFWWKSKDRYRGIHWKNWESLTSHKNEGGLGFKDFAHMNSSLLAKQAWRIVKS 72
           ++ S I R+WW  +D+   IHW +WE LT  K +GGLGF+D    N ++L++QAWR++ +
Sbjct: 398 ELSSIIGRYWWSQQDKANKIHWISWEKLTQSKEKGGLGFRDLHLFNLAMLSRQAWRLLTN 457

Query: 71  PNSLWVKVLKALYFPYSDFL 12
           P+SL  +VLKA YFP+SD L
Sbjct: 458 PDSLCGQVLKARYFPHSDIL 477


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