BLASTX nr result

ID: Glycyrrhiza24_contig00020819 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00020819
         (343 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD32654.1| Zinc finger, RING-type [Medicago truncatula]            73   3e-11
ref|XP_003594158.1| hypothetical protein MTR_2g025080 [Medicago ...    73   3e-11
ref|XP_003534716.1| PREDICTED: uncharacterized protein LOC100804...    69   3e-10
ref|XP_003547273.1| PREDICTED: uncharacterized protein LOC100804...    65   4e-09
ref|XP_003610487.1| hypothetical protein MTR_4g132760 [Medicago ...    55   6e-06

>gb|ABD32654.1| Zinc finger, RING-type [Medicago truncatula]
          Length = 304

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 44/99 (44%), Positives = 50/99 (50%), Gaps = 3/99 (3%)
 Frame = -1

Query: 343 MGCCGATWGFRSTALSHVSHRXXXXXXXXXXETDPGQDPNVFGPDCVGP---TPXXXXXX 173
           +GCCGA WGFRS++ S                TDP +DPN+    CV P   T       
Sbjct: 140 IGCCGANWGFRSSSSSDSQQNQQRILD-----TDPSEDPNM----CVAPVIQTGSSSSSM 190

Query: 172 XXXXXXXAERQIRGPPEETGAAGVRPRGTPWRVSLMRLL 56
                  AERQ+RGP  ET   G R  GTPWRVSLMRLL
Sbjct: 191 NLAAALAAERQLRGPAAETSGGGGRMPGTPWRVSLMRLL 229


>ref|XP_003594158.1| hypothetical protein MTR_2g025080 [Medicago truncatula]
           gi|355483206|gb|AES64409.1| hypothetical protein
           MTR_2g025080 [Medicago truncatula]
          Length = 278

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 44/99 (44%), Positives = 50/99 (50%), Gaps = 3/99 (3%)
 Frame = -1

Query: 343 MGCCGATWGFRSTALSHVSHRXXXXXXXXXXETDPGQDPNVFGPDCVGP---TPXXXXXX 173
           +GCCGA WGFRS++ S                TDP +DPN+    CV P   T       
Sbjct: 49  IGCCGANWGFRSSSSSDSQQNQQRILD-----TDPSEDPNM----CVAPVIQTGSSSSSM 99

Query: 172 XXXXXXXAERQIRGPPEETGAAGVRPRGTPWRVSLMRLL 56
                  AERQ+RGP  ET   G R  GTPWRVSLMRLL
Sbjct: 100 NLAAALAAERQLRGPAAETSGGGGRMPGTPWRVSLMRLL 138


>ref|XP_003534716.1| PREDICTED: uncharacterized protein LOC100804292 [Glycine max]
          Length = 196

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 45/96 (46%), Positives = 47/96 (48%)
 Frame = -1

Query: 343 MGCCGATWGFRSTALSHVSHRXXXXXXXXXXETDPGQDPNVFGPDCVGPTPXXXXXXXXX 164
           MGCCGATWGFRS ALS                T   Q      P+CVGP           
Sbjct: 49  MGCCGATWGFRSDALS---------------VTQGEQQQQETDPECVGPA-GLGSGMNLA 92

Query: 163 XXXXAERQIRGPPEETGAAGVRPRGTPWRVSLMRLL 56
               AERQ+RGP EE     VR  GTPWRVSLMRLL
Sbjct: 93  AALAAERQLRGPQEE----AVRAPGTPWRVSLMRLL 124


>ref|XP_003547273.1| PREDICTED: uncharacterized protein LOC100804959 [Glycine max]
          Length = 209

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 47/96 (48%), Positives = 51/96 (53%)
 Frame = -1

Query: 343 MGCCGATWGFRSTALSHVSHRXXXXXXXXXXETDPGQDPNVFGPDCVGPTPXXXXXXXXX 164
           MGCCGA+WGFRS ALS               ETDPG+   V  P+CVGP           
Sbjct: 52  MGCCGASWGFRSDALS-----VNQGEQEQQQETDPGR---VAAPECVGPA-GSGSGMNLA 102

Query: 163 XXXXAERQIRGPPEETGAAGVRPRGTPWRVSLMRLL 56
               AERQ+R P EE G  GVR    PWRVSLMRLL
Sbjct: 103 AALAAERQLRVPQEEGG--GVR---APWRVSLMRLL 133


>ref|XP_003610487.1| hypothetical protein MTR_4g132760 [Medicago truncatula]
           gi|355511542|gb|AES92684.1| hypothetical protein
           MTR_4g132760 [Medicago truncatula]
          Length = 217

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 38/101 (37%), Positives = 43/101 (42%), Gaps = 5/101 (4%)
 Frame = -1

Query: 343 MGCCGATWGFRSTALSHVSHRXXXXXXXXXXETD-----PGQDPNVFGPDCVGPTPXXXX 179
           MGCCGATW FR   + H  H           E         QDPN   P+C  P      
Sbjct: 51  MGCCGATWVFR-PIIRHEHHHQRNEEGEATVEQQQQLQVQDQDPNPVEPECEAPAGSSGS 109

Query: 178 XXXXXXXXXAERQIRGPPEETGAAGVRPRGTPWRVSLMRLL 56
                    AERQ+R   E +G  G     TPWRVSLM+LL
Sbjct: 110 GMNLAAALAAERQMRVSEEASGGEG----ATPWRVSLMKLL 146


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