BLASTX nr result
ID: Glycyrrhiza24_contig00020818
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza24_contig00020818 (261 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003623963.1| Mediator of RNA polymerase II transcription ... 145 3e-33 ref|XP_003529940.1| PREDICTED: uncharacterized protein LOC100782... 144 7e-33 ref|XP_003552395.1| PREDICTED: uncharacterized protein LOC100806... 144 1e-32 ref|XP_003521885.1| PREDICTED: uncharacterized protein LOC100781... 139 3e-31 ref|XP_002302587.1| predicted protein [Populus trichocarpa] gi|2... 124 1e-26 >ref|XP_003623963.1| Mediator of RNA polymerase II transcription subunit [Medicago truncatula] gi|87240976|gb|ABD32834.1| 2-oxo acid dehydrogenase, lipoyl-binding site [Medicago truncatula] gi|355498978|gb|AES80181.1| Mediator of RNA polymerase II transcription subunit [Medicago truncatula] Length = 2270 Score = 145 bits (367), Expect = 3e-33 Identities = 71/85 (83%), Positives = 78/85 (91%) Frame = -1 Query: 255 FATLLELNGSDMRLNSMAFVPLRARLFLNAMIDCKMPQFIYTKDDGSRLSGHGDSKIHFT 76 FAT LELNGSDMRLNS AFVPLRARLFLNA+ID KMPQ IYTKD GS++SGHG+SKI FT Sbjct: 1643 FATFLELNGSDMRLNSTAFVPLRARLFLNAIIDRKMPQSIYTKDGGSQISGHGESKIQFT 1702 Query: 75 DIESKLQDKLVDVLDALQPAKFHWQ 1 D +SKL+DKLVDVL+ALQPAKFHWQ Sbjct: 1703 DSKSKLEDKLVDVLEALQPAKFHWQ 1727 >ref|XP_003529940.1| PREDICTED: uncharacterized protein LOC100782672 [Glycine max] Length = 2235 Score = 144 bits (363), Expect = 7e-33 Identities = 71/85 (83%), Positives = 74/85 (87%) Frame = -1 Query: 255 FATLLELNGSDMRLNSMAFVPLRARLFLNAMIDCKMPQFIYTKDDGSRLSGHGDSKIHFT 76 FATLLE NGSDM L S AFVPLR+RLFLNAMIDCKMPQ IYTKDDGSR+SG G+SKI FT Sbjct: 1612 FATLLEFNGSDMHLRSTAFVPLRSRLFLNAMIDCKMPQSIYTKDDGSRMSGPGESKIKFT 1671 Query: 75 DIESKLQDKLVDVLDALQPAKFHWQ 1 D ESKLQD LV VLD LQPAKFHWQ Sbjct: 1672 DSESKLQDMLVHVLDTLQPAKFHWQ 1696 >ref|XP_003552395.1| PREDICTED: uncharacterized protein LOC100806985 [Glycine max] Length = 2279 Score = 144 bits (362), Expect = 1e-32 Identities = 72/87 (82%), Positives = 75/87 (86%) Frame = -1 Query: 261 AGFATLLELNGSDMRLNSMAFVPLRARLFLNAMIDCKMPQFIYTKDDGSRLSGHGDSKIH 82 A FATLLELNGSDM S+AFVPLRAR LNAMIDCKMPQ IYTKD+GSR GHG+SKI Sbjct: 1644 AEFATLLELNGSDMHSKSLAFVPLRARHILNAMIDCKMPQSIYTKDEGSRNYGHGESKID 1703 Query: 81 FTDIESKLQDKLVDVLDALQPAKFHWQ 1 FTD ES LQDKLVDVLDALQPAKFHWQ Sbjct: 1704 FTDSESTLQDKLVDVLDALQPAKFHWQ 1730 >ref|XP_003521885.1| PREDICTED: uncharacterized protein LOC100781696 [Glycine max] Length = 2240 Score = 139 bits (349), Expect = 3e-31 Identities = 69/84 (82%), Positives = 72/84 (85%) Frame = -1 Query: 252 ATLLELNGSDMRLNSMAFVPLRARLFLNAMIDCKMPQFIYTKDDGSRLSGHGDSKIHFTD 73 ATLLE NGSDM L S AFVPLR+RLFLNAMIDCKMP IYTKDDGSR+SG G+SKI FTD Sbjct: 1618 ATLLEFNGSDMHLKSTAFVPLRSRLFLNAMIDCKMPPSIYTKDDGSRMSGLGESKIKFTD 1677 Query: 72 IESKLQDKLVDVLDALQPAKFHWQ 1 ESKLQD LV VLD LQPAKFHWQ Sbjct: 1678 SESKLQDLLVHVLDTLQPAKFHWQ 1701 >ref|XP_002302587.1| predicted protein [Populus trichocarpa] gi|222844313|gb|EEE81860.1| predicted protein [Populus trichocarpa] Length = 2219 Score = 124 bits (310), Expect = 1e-26 Identities = 57/87 (65%), Positives = 70/87 (80%) Frame = -1 Query: 261 AGFATLLELNGSDMRLNSMAFVPLRARLFLNAMIDCKMPQFIYTKDDGSRLSGHGDSKIH 82 A FA++LELNG DMR + AFVPLR RLFLNA++DCK+P ++ +DDG+R SGHG SK+ Sbjct: 1571 AEFASMLELNGLDMRFKTKAFVPLRGRLFLNAIVDCKLPHSVFVQDDGNRASGHGGSKVQ 1630 Query: 81 FTDIESKLQDKLVDVLDALQPAKFHWQ 1 + E KL DKLV+VLDALQPAKFHWQ Sbjct: 1631 HAENEIKLLDKLVNVLDALQPAKFHWQ 1657