BLASTX nr result

ID: Glycyrrhiza24_contig00020818 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00020818
         (261 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003623963.1| Mediator of RNA polymerase II transcription ...   145   3e-33
ref|XP_003529940.1| PREDICTED: uncharacterized protein LOC100782...   144   7e-33
ref|XP_003552395.1| PREDICTED: uncharacterized protein LOC100806...   144   1e-32
ref|XP_003521885.1| PREDICTED: uncharacterized protein LOC100781...   139   3e-31
ref|XP_002302587.1| predicted protein [Populus trichocarpa] gi|2...   124   1e-26

>ref|XP_003623963.1| Mediator of RNA polymerase II transcription subunit [Medicago
            truncatula] gi|87240976|gb|ABD32834.1| 2-oxo acid
            dehydrogenase, lipoyl-binding site [Medicago truncatula]
            gi|355498978|gb|AES80181.1| Mediator of RNA polymerase II
            transcription subunit [Medicago truncatula]
          Length = 2270

 Score =  145 bits (367), Expect = 3e-33
 Identities = 71/85 (83%), Positives = 78/85 (91%)
 Frame = -1

Query: 255  FATLLELNGSDMRLNSMAFVPLRARLFLNAMIDCKMPQFIYTKDDGSRLSGHGDSKIHFT 76
            FAT LELNGSDMRLNS AFVPLRARLFLNA+ID KMPQ IYTKD GS++SGHG+SKI FT
Sbjct: 1643 FATFLELNGSDMRLNSTAFVPLRARLFLNAIIDRKMPQSIYTKDGGSQISGHGESKIQFT 1702

Query: 75   DIESKLQDKLVDVLDALQPAKFHWQ 1
            D +SKL+DKLVDVL+ALQPAKFHWQ
Sbjct: 1703 DSKSKLEDKLVDVLEALQPAKFHWQ 1727


>ref|XP_003529940.1| PREDICTED: uncharacterized protein LOC100782672 [Glycine max]
          Length = 2235

 Score =  144 bits (363), Expect = 7e-33
 Identities = 71/85 (83%), Positives = 74/85 (87%)
 Frame = -1

Query: 255  FATLLELNGSDMRLNSMAFVPLRARLFLNAMIDCKMPQFIYTKDDGSRLSGHGDSKIHFT 76
            FATLLE NGSDM L S AFVPLR+RLFLNAMIDCKMPQ IYTKDDGSR+SG G+SKI FT
Sbjct: 1612 FATLLEFNGSDMHLRSTAFVPLRSRLFLNAMIDCKMPQSIYTKDDGSRMSGPGESKIKFT 1671

Query: 75   DIESKLQDKLVDVLDALQPAKFHWQ 1
            D ESKLQD LV VLD LQPAKFHWQ
Sbjct: 1672 DSESKLQDMLVHVLDTLQPAKFHWQ 1696


>ref|XP_003552395.1| PREDICTED: uncharacterized protein LOC100806985 [Glycine max]
          Length = 2279

 Score =  144 bits (362), Expect = 1e-32
 Identities = 72/87 (82%), Positives = 75/87 (86%)
 Frame = -1

Query: 261  AGFATLLELNGSDMRLNSMAFVPLRARLFLNAMIDCKMPQFIYTKDDGSRLSGHGDSKIH 82
            A FATLLELNGSDM   S+AFVPLRAR  LNAMIDCKMPQ IYTKD+GSR  GHG+SKI 
Sbjct: 1644 AEFATLLELNGSDMHSKSLAFVPLRARHILNAMIDCKMPQSIYTKDEGSRNYGHGESKID 1703

Query: 81   FTDIESKLQDKLVDVLDALQPAKFHWQ 1
            FTD ES LQDKLVDVLDALQPAKFHWQ
Sbjct: 1704 FTDSESTLQDKLVDVLDALQPAKFHWQ 1730


>ref|XP_003521885.1| PREDICTED: uncharacterized protein LOC100781696 [Glycine max]
          Length = 2240

 Score =  139 bits (349), Expect = 3e-31
 Identities = 69/84 (82%), Positives = 72/84 (85%)
 Frame = -1

Query: 252  ATLLELNGSDMRLNSMAFVPLRARLFLNAMIDCKMPQFIYTKDDGSRLSGHGDSKIHFTD 73
            ATLLE NGSDM L S AFVPLR+RLFLNAMIDCKMP  IYTKDDGSR+SG G+SKI FTD
Sbjct: 1618 ATLLEFNGSDMHLKSTAFVPLRSRLFLNAMIDCKMPPSIYTKDDGSRMSGLGESKIKFTD 1677

Query: 72   IESKLQDKLVDVLDALQPAKFHWQ 1
             ESKLQD LV VLD LQPAKFHWQ
Sbjct: 1678 SESKLQDLLVHVLDTLQPAKFHWQ 1701


>ref|XP_002302587.1| predicted protein [Populus trichocarpa] gi|222844313|gb|EEE81860.1|
            predicted protein [Populus trichocarpa]
          Length = 2219

 Score =  124 bits (310), Expect = 1e-26
 Identities = 57/87 (65%), Positives = 70/87 (80%)
 Frame = -1

Query: 261  AGFATLLELNGSDMRLNSMAFVPLRARLFLNAMIDCKMPQFIYTKDDGSRLSGHGDSKIH 82
            A FA++LELNG DMR  + AFVPLR RLFLNA++DCK+P  ++ +DDG+R SGHG SK+ 
Sbjct: 1571 AEFASMLELNGLDMRFKTKAFVPLRGRLFLNAIVDCKLPHSVFVQDDGNRASGHGGSKVQ 1630

Query: 81   FTDIESKLQDKLVDVLDALQPAKFHWQ 1
              + E KL DKLV+VLDALQPAKFHWQ
Sbjct: 1631 HAENEIKLLDKLVNVLDALQPAKFHWQ 1657


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