BLASTX nr result

ID: Glycyrrhiza24_contig00020787 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00020787
         (473 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003544671.1| PREDICTED: uncharacterized protein LOC100809...    69   6e-13
ref|NP_001237269.1| VHS and GAT domain protein [Glycine max] gi|...    67   2e-12
ref|XP_003522697.1| PREDICTED: TOM1-like protein 1-like [Glycine...    69   4e-10
ref|XP_003526479.1| PREDICTED: TOM1-like protein 1-like [Glycine...    61   4e-09
ref|XP_002324811.1| predicted protein [Populus trichocarpa] gi|2...    63   3e-08

>ref|XP_003544671.1| PREDICTED: uncharacterized protein LOC100809022 [Glycine max]
          Length = 672

 Score = 68.6 bits (166), Expect(2) = 6e-13
 Identities = 31/38 (81%), Positives = 34/38 (89%)
 Frame = -2

Query: 397 EQQMYGMSIRDDSGLRNSNQVSTTSYVPSGRPSKPEDK 284
           E+QMYGMS+RDDS LRN  Q STTSYVPSG+PSKPEDK
Sbjct: 612 ERQMYGMSVRDDSSLRNPYQASTTSYVPSGKPSKPEDK 649



 Score = 30.0 bits (66), Expect(2) = 6e-13
 Identities = 12/12 (100%), Positives = 12/12 (100%)
 Frame = -3

Query: 162 KPKPTPGRAGSM 127
           KPKPTPGRAGSM
Sbjct: 661 KPKPTPGRAGSM 672


>ref|NP_001237269.1| VHS and GAT domain protein [Glycine max] gi|82791812|gb|ABB90835.1|
           VHS and GAT domain protein [Glycine max]
          Length = 672

 Score = 67.0 bits (162), Expect(2) = 2e-12
 Identities = 30/38 (78%), Positives = 33/38 (86%)
 Frame = -2

Query: 397 EQQMYGMSIRDDSGLRNSNQVSTTSYVPSGRPSKPEDK 284
           E+QMYGMS+RDDS LRN  Q STTSY PSG+PSKPEDK
Sbjct: 612 ERQMYGMSVRDDSSLRNPYQASTTSYAPSGKPSKPEDK 649



 Score = 30.0 bits (66), Expect(2) = 2e-12
 Identities = 12/12 (100%), Positives = 12/12 (100%)
 Frame = -3

Query: 162 KPKPTPGRAGSM 127
           KPKPTPGRAGSM
Sbjct: 661 KPKPTPGRAGSM 672


>ref|XP_003522697.1| PREDICTED: TOM1-like protein 1-like [Glycine max]
          Length = 666

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 30/38 (78%), Positives = 35/38 (92%)
 Frame = -2

Query: 397 EQQMYGMSIRDDSGLRNSNQVSTTSYVPSGRPSKPEDK 284
           EQQMYG+S+RDD  LRNSNQVS+TSYVP G+PSKPED+
Sbjct: 606 EQQMYGLSVRDDGALRNSNQVSSTSYVPPGKPSKPEDE 643


>ref|XP_003526479.1| PREDICTED: TOM1-like protein 1-like [Glycine max]
          Length = 666

 Score = 61.2 bits (147), Expect(2) = 4e-09
 Identities = 27/38 (71%), Positives = 32/38 (84%)
 Frame = -2

Query: 397 EQQMYGMSIRDDSGLRNSNQVSTTSYVPSGRPSKPEDK 284
           EQQMYG+S+RDD   +NS QVS+ SYVP G+PSKPEDK
Sbjct: 606 EQQMYGLSVRDDGAPKNSYQVSSPSYVPPGKPSKPEDK 643



 Score = 24.3 bits (51), Expect(2) = 4e-09
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = -3

Query: 162 KPKPTPGRAGSM 127
           KPKPTP + GSM
Sbjct: 655 KPKPTPDQTGSM 666


>ref|XP_002324811.1| predicted protein [Populus trichocarpa] gi|222866245|gb|EEF03376.1|
           predicted protein [Populus trichocarpa]
          Length = 674

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 30/39 (76%), Positives = 36/39 (92%), Gaps = 1/39 (2%)
 Frame = -2

Query: 397 EQQMYGMSIRDDSGLRNSN-QVSTTSYVPSGRPSKPEDK 284
           EQ+M G+S+RDD+GLRNS+ QVSTT YVPSG+PSKPEDK
Sbjct: 612 EQRMNGVSVRDDNGLRNSSYQVSTTPYVPSGKPSKPEDK 650


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