BLASTX nr result

ID: Glycyrrhiza24_contig00020782 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00020782
         (642 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550361.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g...   285   5e-75
ref|XP_003589308.1| F-box/FBD/LRR-repeat protein [Medicago trunc...   273   2e-71
ref|XP_003589307.1| F-box/FBD/LRR-repeat protein [Medicago trunc...   273   2e-71
ref|XP_003588811.1| F-box/FBD/LRR-repeat protein [Medicago trunc...   221   1e-55
ref|XP_002510330.1| ubiquitin-protein ligase, putative [Ricinus ...   218   1e-54

>ref|XP_003550361.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like [Glycine
           max]
          Length = 427

 Score =  285 bits (729), Expect = 5e-75
 Identities = 139/169 (82%), Positives = 156/169 (92%)
 Frame = -3

Query: 640 SSNLVKFFAHLPHIQRLEIQSYFLKYLTIGVVPVMLPTPCIDLSYLSIRINFNDLNEISA 461
           SSNL+KFF HLPH+QRLE+QSYFLKYL +GVVP+ LP PCIDLSYLSIRINFNDL EISA
Sbjct: 258 SSNLLKFFVHLPHVQRLEVQSYFLKYLAVGVVPIKLPRPCIDLSYLSIRINFNDLKEISA 317

Query: 460 ALCVFRSSPNLRELEILARPEEQTVLLTPATYCWEDVYLDWPVMQVRYVRIDGISGIKPE 281
           +LC+ RSSPNL+ELEILARPEEQTVLLT  TYCWEDVY   PVMQ+RYV+IDGISGIKPE
Sbjct: 318 SLCLLRSSPNLQELEILARPEEQTVLLT-HTYCWEDVYFSCPVMQLRYVKIDGISGIKPE 376

Query: 280 LDFISFLLLYSPVLEKMTVKPVSNTGTELMKELLRFRRASGRAEVIYLD 134
           LDFI+FLLL+SPVLE+MTVKPV+N G ELMKELLRFRRASG+AE+IYL+
Sbjct: 377 LDFINFLLLHSPVLERMTVKPVANVGLELMKELLRFRRASGQAEIIYLE 425


>ref|XP_003589308.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355478356|gb|AES59559.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 428

 Score =  273 bits (699), Expect = 2e-71
 Identities = 137/169 (81%), Positives = 147/169 (86%)
 Frame = -3

Query: 640 SSNLVKFFAHLPHIQRLEIQSYFLKYLTIGVVPVMLPTPCIDLSYLSIRINFNDLNEISA 461
           +SNLV+F  HLP IQRLEIQSYFLKYL +G VPV LPTPCIDLSYLSIRINF D  EISA
Sbjct: 258 TSNLVEFLIHLPRIQRLEIQSYFLKYLALGAVPVKLPTPCIDLSYLSIRINFYDSKEISA 317

Query: 460 ALCVFRSSPNLRELEILARPEEQTVLLTPATYCWEDVYLDWPVMQVRYVRIDGISGIKPE 281
           ALC+FRSSPNLRELEILARPEEQ + L     CWEDVYLDWPVM+VR+VRIDGISGIKPE
Sbjct: 318 ALCLFRSSPNLRELEILARPEEQPLPLAHHADCWEDVYLDWPVMRVRHVRIDGISGIKPE 377

Query: 280 LDFISFLLLYSPVLEKMTVKPVSNTGTELMKELLRFRRASGRAEVIYLD 134
           LDFISF+LLYSPVLE+MTVKP  N   EL+KELLR RRASGRAEVIYLD
Sbjct: 378 LDFISFILLYSPVLERMTVKPALNASPELVKELLRLRRASGRAEVIYLD 426


>ref|XP_003589307.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355478355|gb|AES59558.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 660

 Score =  273 bits (699), Expect = 2e-71
 Identities = 137/169 (81%), Positives = 147/169 (86%)
 Frame = -3

Query: 640 SSNLVKFFAHLPHIQRLEIQSYFLKYLTIGVVPVMLPTPCIDLSYLSIRINFNDLNEISA 461
           +SNLV+F  HLP IQRLEIQSYFLKYL +G VPV LPTPCIDLSYLSIRINF D  EISA
Sbjct: 490 TSNLVEFLIHLPRIQRLEIQSYFLKYLALGAVPVKLPTPCIDLSYLSIRINFYDSKEISA 549

Query: 460 ALCVFRSSPNLRELEILARPEEQTVLLTPATYCWEDVYLDWPVMQVRYVRIDGISGIKPE 281
           ALC+FRSSPNLRELEILARPEEQ + L     CWEDVYLDWPVM+VR+VRIDGISGIKPE
Sbjct: 550 ALCLFRSSPNLRELEILARPEEQPLPLAHHADCWEDVYLDWPVMRVRHVRIDGISGIKPE 609

Query: 280 LDFISFLLLYSPVLEKMTVKPVSNTGTELMKELLRFRRASGRAEVIYLD 134
           LDFISF+LLYSPVLE+MTVKP  N   EL+KELLR RRASGRAEVIYLD
Sbjct: 610 LDFISFILLYSPVLERMTVKPALNASPELVKELLRLRRASGRAEVIYLD 658


>ref|XP_003588811.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355477859|gb|AES59062.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 449

 Score =  221 bits (562), Expect = 1e-55
 Identities = 118/171 (69%), Positives = 133/171 (77%), Gaps = 2/171 (1%)
 Frame = -3

Query: 640 SSNLVKFFAHLPHIQRLEIQSYFLKYLTIGVVPVMLPTPCIDLSYLSIRINFNDLNEISA 461
           SSNL+KFFAH PHIQ LEI  YFLKYL    VPV LP PCI L  LS+ INFNDL EISA
Sbjct: 268 SSNLLKFFAHQPHIQFLEIGYYFLKYLAADDVPVKLPAPCISLCELSLCINFNDLKEISA 327

Query: 460 ALCVFRSSPNLRELEILARPEEQTVLLTPATYCWEDVYLDWPVM--QVRYVRIDGISGIK 287
           ALC+ RSSPNL++LEI AR EE+TVLLTP +YCWED++   P M  QV++V IDGISGI+
Sbjct: 328 ALCLLRSSPNLKKLEIFARIEEETVLLTPTSYCWEDIF-SGPAMPIQVQHVTIDGISGIR 386

Query: 286 PELDFISFLLLYSPVLEKMTVKPVSNTGTELMKELLRFRRASGRAEVIYLD 134
            ELDFI FLL YSPVLEKM VK V N   EL+ ELLRF+RAS  AEVIYL+
Sbjct: 387 SELDFIRFLLRYSPVLEKMIVKHVVNVQPELITELLRFKRASDEAEVIYLE 437


>ref|XP_002510330.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551031|gb|EEF52517.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 426

 Score =  218 bits (554), Expect = 1e-54
 Identities = 118/170 (69%), Positives = 139/170 (81%), Gaps = 1/170 (0%)
 Frame = -3

Query: 640 SSNLVKFFAHLPHIQRLEIQSYFLKYLTIGVVPVMLPTPCIDLSYLSIRINFNDLNEISA 461
           SS L++FFA+LPHI+RLE+QSYFLKYL+IG VP  LP PC DL+YLSIRINFNDL E SA
Sbjct: 257 SSKLLRFFANLPHIRRLEVQSYFLKYLSIGNVPSRLPKPCFDLNYLSIRINFNDLEENSA 316

Query: 460 ALCVFRSSPNLRELEILARPEEQTVLLTPATYCWEDVYLDWPVMQVRYVRIDGISGIKPE 281
           ALC+ RSSPN++ELE+LARPEEQT L T  T  WED + +    Q+R VRI GISGI+ E
Sbjct: 317 ALCLLRSSPNVQELEMLARPEEQTSLGT-ITNFWEDDHWNNLFGQLRLVRIVGISGIRCE 375

Query: 280 LDFISFLLLYSPVLEKMTVKPVSNT-GTELMKELLRFRRASGRAEVIYLD 134
           LDF++FLL  SPVLE+MTVKP S+  G EL+KELLRFRRAS RAE+IYLD
Sbjct: 376 LDFMNFLLSNSPVLERMTVKPASSDGGWELIKELLRFRRASARAEIIYLD 425


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