BLASTX nr result

ID: Glycyrrhiza24_contig00020774 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00020774
         (377 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003544731.1| PREDICTED: small RNA degrading nuclease 5-li...   147   1e-33
ref|XP_003541832.1| PREDICTED: small RNA degrading nuclease 5-li...   147   1e-33
ref|XP_002520248.1| rnase h, putative [Ricinus communis] gi|2235...   118   4e-25
ref|XP_004168198.1| PREDICTED: small RNA degrading nuclease 5-li...   114   6e-24
ref|XP_004146782.1| PREDICTED: small RNA degrading nuclease 5-li...   114   6e-24

>ref|XP_003544731.1| PREDICTED: small RNA degrading nuclease 5-like [Glycine max]
          Length = 567

 Score =  147 bits (370), Expect = 1e-33
 Identities = 74/88 (84%), Positives = 79/88 (89%)
 Frame = +2

Query: 2   KLNKSAELKGILARMDTRVHKLYASLPTNAMMIVCTGHGDTAVVRRLRKMLAEENENESN 181
           KL  SAELK ILARMD R+H LY SLPTNAMMI+CTGHGDTA+VRRLRKMLAE  +NESN
Sbjct: 482 KLKASAELKEILARMDARIHNLYLSLPTNAMMIICTGHGDTAIVRRLRKMLAE--QNESN 539

Query: 182 LCREKIVEILEEFQARAEVALCFVGVKH 265
           +CREKIVEILEE QARAEVALCFVGVKH
Sbjct: 540 ICREKIVEILEEVQARAEVALCFVGVKH 567


>ref|XP_003541832.1| PREDICTED: small RNA degrading nuclease 5-like [Glycine max]
          Length = 576

 Score =  147 bits (370), Expect = 1e-33
 Identities = 74/88 (84%), Positives = 79/88 (89%)
 Frame = +2

Query: 2   KLNKSAELKGILARMDTRVHKLYASLPTNAMMIVCTGHGDTAVVRRLRKMLAEENENESN 181
           KLN SAELK ILARMD R+H LY SLPTNAMMI+CTGHGDTA+VRRLRKML E  +NESN
Sbjct: 491 KLNASAELKEILARMDARIHNLYLSLPTNAMMIICTGHGDTAIVRRLRKMLTE--QNESN 548

Query: 182 LCREKIVEILEEFQARAEVALCFVGVKH 265
           LCRE+IVEILEE QARAEVALCFVGVKH
Sbjct: 549 LCREEIVEILEEVQARAEVALCFVGVKH 576


>ref|XP_002520248.1| rnase h, putative [Ricinus communis] gi|223540467|gb|EEF42034.1|
           rnase h, putative [Ricinus communis]
          Length = 572

 Score =  118 bits (296), Expect = 4e-25
 Identities = 57/88 (64%), Positives = 74/88 (84%)
 Frame = +2

Query: 2   KLNKSAELKGILARMDTRVHKLYASLPTNAMMIVCTGHGDTAVVRRLRKMLAEENENESN 181
           + + ++ELK IL RMD RV  LY++LPTN M+I+CTGHGDTA+VRRLRK+L E  + E+ 
Sbjct: 487 RCSMTSELKEILIRMDARVRCLYSALPTNTMLIICTGHGDTAIVRRLRKLLTE--KQETR 544

Query: 182 LCREKIVEILEEFQARAEVALCFVGVKH 265
           +CREKIV++LEE QA+AEVALCFVGVK+
Sbjct: 545 ICREKIVKVLEELQAQAEVALCFVGVKN 572


>ref|XP_004168198.1| PREDICTED: small RNA degrading nuclease 5-like, partial [Cucumis
           sativus]
          Length = 199

 Score =  114 bits (286), Expect = 6e-24
 Identities = 56/84 (66%), Positives = 71/84 (84%)
 Frame = +2

Query: 14  SAELKGILARMDTRVHKLYASLPTNAMMIVCTGHGDTAVVRRLRKMLAEENENESNLCRE 193
           S EL+ ILARMD+R++ LY SLPTNAM+I+CTGHGD  +V+RLRKML E  ++E+++CRE
Sbjct: 118 SVELQEILARMDSRINDLYTSLPTNAMLIICTGHGDITLVQRLRKMLQE--QSETSICRE 175

Query: 194 KIVEILEEFQARAEVALCFVGVKH 265
           KIV+ILEE  A+AEVALCFV  KH
Sbjct: 176 KIVKILEELHAQAEVALCFVCTKH 199


>ref|XP_004146782.1| PREDICTED: small RNA degrading nuclease 5-like [Cucumis sativus]
          Length = 572

 Score =  114 bits (286), Expect = 6e-24
 Identities = 56/84 (66%), Positives = 71/84 (84%)
 Frame = +2

Query: 14  SAELKGILARMDTRVHKLYASLPTNAMMIVCTGHGDTAVVRRLRKMLAEENENESNLCRE 193
           S EL+ ILARMD+R++ LY SLPTNAM+I+CTGHGD  +V+RLRKML E  ++E+++CRE
Sbjct: 491 SVELQEILARMDSRINDLYTSLPTNAMLIICTGHGDITLVQRLRKMLQE--QSETSICRE 548

Query: 194 KIVEILEEFQARAEVALCFVGVKH 265
           KIV+ILEE  A+AEVALCFV  KH
Sbjct: 549 KIVKILEELHAQAEVALCFVCTKH 572


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