BLASTX nr result

ID: Glycyrrhiza24_contig00020753 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00020753
         (224 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003629342.1| Zinc finger CCCH domain-containing protein [...    86   4e-15
ref|XP_003519872.1| PREDICTED: zinc finger CCCH domain-containin...    82   6e-14

>ref|XP_003629342.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
           gi|355523364|gb|AET03818.1| Zinc finger CCCH
           domain-containing protein [Medicago truncatula]
          Length = 594

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 47/73 (64%), Positives = 50/73 (68%)
 Frame = +1

Query: 1   TSRPVSSDACLMPLAGVSPGSEADLXXXXXXXXXIMKSNEQGSLIDMDLLVKIFNDPNMI 180
           +SR VSSDA LMPLAGVS   EAD          I+KSNEQ  LIDMDLLVKI NDP MI
Sbjct: 200 SSRTVSSDARLMPLAGVSSSLEADAAAASEVVAAILKSNEQAGLIDMDLLVKILNDPKMI 259

Query: 181 EKLSSEHRTAATT 219
           E L +EH  AATT
Sbjct: 260 ENLINEHGVAATT 272


>ref|XP_003519872.1| PREDICTED: zinc finger CCCH domain-containing protein 6-like
           [Glycine max]
          Length = 520

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 41/69 (59%), Positives = 50/69 (72%)
 Frame = +1

Query: 13  VSSDACLMPLAGVSPGSEADLXXXXXXXXXIMKSNEQGSLIDMDLLVKIFNDPNMIEKLS 192
           VS D C+ P+AGVS G EADL         I++SNEQG+LIDMDLL KIF DP ++E+L 
Sbjct: 203 VSLDPCIRPMAGVSSGMEADLAAASSVVATIIRSNEQGTLIDMDLLGKIFTDPKILEQLI 262

Query: 193 SEHRTAATT 219
           +EH TAATT
Sbjct: 263 NEHGTAATT 271


Top