BLASTX nr result

ID: Glycyrrhiza24_contig00020707 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00020707
         (487 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003520935.1| PREDICTED: reticulon-like protein B12-like [...   197   1e-48
ref|XP_003604578.1| Reticulon-like protein B12 [Medicago truncat...   193   1e-47
ref|XP_003516933.1| PREDICTED: reticulon-like protein B12-like [...   182   3e-44
ref|XP_002273700.1| PREDICTED: reticulon-like protein B12 [Vitis...   177   8e-43
ref|XP_002527867.1| 3-beta-hydroxy-delta5-steroid dehydrogenase,...   175   3e-42

>ref|XP_003520935.1| PREDICTED: reticulon-like protein B12-like [Glycine max]
          Length = 209

 Score =  197 bits (500), Expect = 1e-48
 Identities = 104/130 (80%), Positives = 107/130 (82%)
 Frame = -1

Query: 391 SSQRLFNRERTLHEILGGGQVADLILWRRKNLTVWILLVTLAAWVVFERSGYTXXXXXXX 212
           SS RLFNR+R+LHEILGGGQVADLILWRRKNLTV ILLVTLA WVVFERSGYT       
Sbjct: 3   SSDRLFNRQRSLHEILGGGQVADLILWRRKNLTVGILLVTLAVWVVFERSGYTLLSLVSN 62

Query: 211 XXXXXXXXXXLWAKSAAILNRPAPPLPQLHLSEEMANEVTAFIRTRVNNLFSVSQDIALG 32
                     LWAKSAAILNRPAPPLPQLHLSEEMANEV  FIRTRVN+L SVSQDIALG
Sbjct: 63  VLLLLIVILFLWAKSAAILNRPAPPLPQLHLSEEMANEVKTFIRTRVNDLLSVSQDIALG 122

Query: 31  KDSRLFLKVA 2
           KDSRLFLKVA
Sbjct: 123 KDSRLFLKVA 132


>ref|XP_003604578.1| Reticulon-like protein B12 [Medicago truncatula]
           gi|355505633|gb|AES86775.1| Reticulon-like protein B12
           [Medicago truncatula]
          Length = 209

 Score =  193 bits (490), Expect = 1e-47
 Identities = 102/130 (78%), Positives = 108/130 (83%)
 Frame = -1

Query: 391 SSQRLFNRERTLHEILGGGQVADLILWRRKNLTVWILLVTLAAWVVFERSGYTXXXXXXX 212
           SSQRLFNR+RTLHEILG GQVADLILWRRKN TV ILLVTLAA+VVFERSGYT       
Sbjct: 3   SSQRLFNRKRTLHEILGSGQVADLILWRRKNQTVMILLVTLAAFVVFERSGYTLLSLVSN 62

Query: 211 XXXXXXXXXXLWAKSAAILNRPAPPLPQLHLSEEMANEVTAFIRTRVNNLFSVSQDIALG 32
                     LWAKSAAILNRPAPPLPQLHLS+EM NE+ AFI+T+VNNLFSVSQDIALG
Sbjct: 63  VLLLLVVILFLWAKSAAILNRPAPPLPQLHLSDEMTNEMAAFIQTKVNNLFSVSQDIALG 122

Query: 31  KDSRLFLKVA 2
           KDSRLFLKVA
Sbjct: 123 KDSRLFLKVA 132


>ref|XP_003516933.1| PREDICTED: reticulon-like protein B12-like [Glycine max]
          Length = 209

 Score =  182 bits (461), Expect = 3e-44
 Identities = 98/130 (75%), Positives = 100/130 (76%)
 Frame = -1

Query: 391 SSQRLFNRERTLHEILGGGQVADLILWRRKNLTVWILLVTLAAWVVFERSGYTXXXXXXX 212
           S  RLFNR+R LHEILGGGQVADLILWRRKNLTV ILLVTL  WVVFERSGYT       
Sbjct: 3   SFDRLFNRQRGLHEILGGGQVADLILWRRKNLTVGILLVTLGVWVVFERSGYTLLSLISN 62

Query: 211 XXXXXXXXXXLWAKSAAILNRPAPPLPQLHLSEEMANEVTAFIRTRVNNLFSVSQDIALG 32
                     LWAKSA ILNRPAPPLPQL LSEEMANE   FI TRVN+L SVSQDIALG
Sbjct: 63  VLLLLIVILFLWAKSADILNRPAPPLPQLRLSEEMANEAKTFICTRVNDLLSVSQDIALG 122

Query: 31  KDSRLFLKVA 2
           KDSRLFLKVA
Sbjct: 123 KDSRLFLKVA 132


>ref|XP_002273700.1| PREDICTED: reticulon-like protein B12 [Vitis vinifera]
           gi|297740256|emb|CBI30438.3| unnamed protein product
           [Vitis vinifera]
          Length = 209

 Score =  177 bits (449), Expect = 8e-43
 Identities = 92/130 (70%), Positives = 101/130 (77%)
 Frame = -1

Query: 391 SSQRLFNRERTLHEILGGGQVADLILWRRKNLTVWILLVTLAAWVVFERSGYTXXXXXXX 212
           SS RLFNR+RT+H+ILGGG VAD++LWR+KNLTV ILLVTLAAWVVFE SGYT       
Sbjct: 3   SSDRLFNRQRTVHQILGGGLVADVMLWRQKNLTVGILLVTLAAWVVFELSGYTLLSLVSS 62

Query: 211 XXXXXXXXXXLWAKSAAILNRPAPPLPQLHLSEEMANEVTAFIRTRVNNLFSVSQDIALG 32
                     LWAKSAAILNRPAPPLP L+LSEE+ NEV AFIRTR N L  VSQDIALG
Sbjct: 63  VFLLLVSILFLWAKSAAILNRPAPPLPNLYLSEEIVNEVAAFIRTRTNTLLQVSQDIALG 122

Query: 31  KDSRLFLKVA 2
           KDSR+F KVA
Sbjct: 123 KDSRMFFKVA 132


>ref|XP_002527867.1| 3-beta-hydroxy-delta5-steroid dehydrogenase, putative [Ricinus
           communis] gi|223532718|gb|EEF34498.1|
           3-beta-hydroxy-delta5-steroid dehydrogenase, putative
           [Ricinus communis]
          Length = 209

 Score =  175 bits (444), Expect = 3e-42
 Identities = 91/130 (70%), Positives = 101/130 (77%)
 Frame = -1

Query: 391 SSQRLFNRERTLHEILGGGQVADLILWRRKNLTVWILLVTLAAWVVFERSGYTXXXXXXX 212
           SS RLFNR+ T+HEILGGG VAD+ILWR+KN+T  ILL  LA+WVVFERSGYT       
Sbjct: 3   SSGRLFNRQTTVHEILGGGLVADVILWRQKNVTGGILLAALASWVVFERSGYTLLSLFSS 62

Query: 211 XXXXXXXXXXLWAKSAAILNRPAPPLPQLHLSEEMANEVTAFIRTRVNNLFSVSQDIALG 32
                     LWAKSAAILNRPAPPLP+LHLSEEMANEV +FIRT VN+  SVSQDIALG
Sbjct: 63  VVLLLVAILFLWAKSAAILNRPAPPLPELHLSEEMANEVASFIRTHVNDFLSVSQDIALG 122

Query: 31  KDSRLFLKVA 2
           KD+RLF KVA
Sbjct: 123 KDTRLFFKVA 132


Top