BLASTX nr result

ID: Glycyrrhiza24_contig00020678 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00020678
         (230 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003555124.1| PREDICTED: probable E3 ubiquitin-protein lig...    72   5e-11
gb|AFK46714.1| unknown [Lotus japonicus]                               70   2e-10
ref|XP_002329325.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-09
ref|XP_004156186.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ...    63   3e-08
ref|XP_004141502.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ...    63   3e-08

>ref|XP_003555124.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 395

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 33/35 (94%), Positives = 34/35 (97%)
 Frame = +3

Query: 120 MDSNSSIIAWGSGEDGQLGIGSNEEKEWVCLVKAL 224
           MDS+S IIAWGSGEDGQLGIGSNEEKEWVCLVKAL
Sbjct: 1   MDSHSHIIAWGSGEDGQLGIGSNEEKEWVCLVKAL 35


>gb|AFK46714.1| unknown [Lotus japonicus]
          Length = 198

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 31/37 (83%), Positives = 35/37 (94%)
 Frame = +3

Query: 120 MDSNSSIIAWGSGEDGQLGIGSNEEKEWVCLVKALPS 230
           MDSNS IIAWGSGEDGQLGIG+NE+KEWVC+V+AL S
Sbjct: 1   MDSNSPIIAWGSGEDGQLGIGNNEDKEWVCVVQALAS 37


>ref|XP_002329325.1| predicted protein [Populus trichocarpa] gi|222870779|gb|EEF07910.1|
           predicted protein [Populus trichocarpa]
          Length = 392

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 29/35 (82%), Positives = 33/35 (94%)
 Frame = +3

Query: 120 MDSNSSIIAWGSGEDGQLGIGSNEEKEWVCLVKAL 224
           M + SS+IAWGSGEDGQLGIG+NEEKEWVC+VKAL
Sbjct: 1   MATESSVIAWGSGEDGQLGIGNNEEKEWVCIVKAL 35


>ref|XP_004156186.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC1-like [Cucumis sativus]
          Length = 390

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 26/37 (70%), Positives = 33/37 (89%)
 Frame = +3

Query: 120 MDSNSSIIAWGSGEDGQLGIGSNEEKEWVCLVKALPS 230
           M + ++IIAWGSGEDGQLG+G+NEE+EWVC +KAL S
Sbjct: 1   MAAGTAIIAWGSGEDGQLGLGNNEEREWVCAIKALES 37


>ref|XP_004141502.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC1-like [Cucumis sativus]
          Length = 390

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 26/37 (70%), Positives = 33/37 (89%)
 Frame = +3

Query: 120 MDSNSSIIAWGSGEDGQLGIGSNEEKEWVCLVKALPS 230
           M + ++IIAWGSGEDGQLG+G+NEE+EWVC +KAL S
Sbjct: 1   MAAGTAIIAWGSGEDGQLGLGNNEEREWVCAIKALES 37


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