BLASTX nr result

ID: Glycyrrhiza24_contig00020676 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00020676
         (372 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003553459.1| PREDICTED: preprotein translocase subunit se...    84   1e-14
ref|XP_003520565.1| PREDICTED: preprotein translocase subunit se...    81   1e-13

>ref|XP_003553459.1| PREDICTED: preprotein translocase subunit secY-like [Glycine max]
          Length = 338

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 54/111 (48%), Positives = 65/111 (58%), Gaps = 4/111 (3%)
 Frame = -2

Query: 323 MEATRXXXXXXXXXXFRTKPTALRARRHAESIHGIGTGVSLFTVPA----SSKTNFPKLN 156
           MEATR          F TKP ALR RR+ + I+G+GT V LFT PA     +++ FPKLN
Sbjct: 1   MEATRFSPNHFYPHCFLTKPNALRERRYVKCINGVGTRVYLFTNPAFNNAPNRSLFPKLN 60

Query: 155 RRLSVNFSDRLRSDYTRVEAPLSSGEAFPATHXXXXXXXXEAIIASPGGDD 3
           R LSV+FSDRLR DY RV+AP S  E  PAT          A  +SP  D+
Sbjct: 61  RTLSVSFSDRLRDDYVRVDAPRSK-EVVPATRGGDGGEAILA--SSPSADN 108


>ref|XP_003520565.1| PREDICTED: preprotein translocase subunit secY-like [Glycine max]
          Length = 546

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 49/90 (54%), Positives = 58/90 (64%), Gaps = 3/90 (3%)
 Frame = -2

Query: 323 MEATRXXXXXXXXXXFRTKPTALRARRHAESIHGIGTGVSLFTVP---ASSKTNFPKLNR 153
           MEATR          F+TKP ALR RR+ + I+GIG  VSLFT P   AS+++ FPKLNR
Sbjct: 1   MEATRFSPNHFYPHRFQTKPNALRERRYVKCINGIGARVSLFTNPAFNASNRSLFPKLNR 60

Query: 152 RLSVNFSDRLRSDYTRVEAPLSSGEAFPAT 63
            LSV+FSDRLR DY RV+      E  PAT
Sbjct: 61  TLSVSFSDRLRGDYARVDE-----EVVPAT 85


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