BLASTX nr result

ID: Glycyrrhiza24_contig00020672 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00020672
         (801 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003538518.1| PREDICTED: uncharacterized protein LOC100781...   300   2e-79
ref|XP_003551268.1| PREDICTED: uncharacterized protein LOC100782...   296   3e-78
ref|XP_003601606.1| Mediator of RNA polymerase II transcription ...   284   2e-74
ref|XP_004144140.1| PREDICTED: mediator of RNA polymerase II tra...   267   2e-69
ref|XP_002283658.2| PREDICTED: uncharacterized protein LOC100263...   267   2e-69

>ref|XP_003538518.1| PREDICTED: uncharacterized protein LOC100781873 [Glycine max]
          Length = 1918

 Score =  300 bits (768), Expect = 2e-79
 Identities = 143/149 (95%), Positives = 147/149 (98%)
 Frame = +3

Query: 354 MWTNVFKIGSLHQISWFQFLPHEPDMNPLPDKSVKVDQKDAAMLLVLSSHLQLQKEGFLS 533
           MWTNVFKIGSLHQISWFQFLPHEPD+NPLPDKSVKVDQKDAAMLLVLSSHLQLQKEGFLS
Sbjct: 1   MWTNVFKIGSLHQISWFQFLPHEPDLNPLPDKSVKVDQKDAAMLLVLSSHLQLQKEGFLS 60

Query: 534 TWTNSFVGPWDPSQGLHNPDEKIKLWLFLPGRHSSIVETAQPALSGLRVVASGLWLAPGD 713
           TWTNSFVGPWDPSQGLHNPDEKIKLWLFLPGRHSS+VETAQ A+SGLRVVASGLWLAPGD
Sbjct: 61  TWTNSFVGPWDPSQGLHNPDEKIKLWLFLPGRHSSVVETAQTAVSGLRVVASGLWLAPGD 120

Query: 714 SEEVAAALSQALRNCIERALPGLYYMRFG 800
           SEEVAAALSQALRNC+ERAL GLYYMRFG
Sbjct: 121 SEEVAAALSQALRNCVERALFGLYYMRFG 149


>ref|XP_003551268.1| PREDICTED: uncharacterized protein LOC100782017 [Glycine max]
          Length = 1920

 Score =  296 bits (759), Expect = 3e-78
 Identities = 142/149 (95%), Positives = 146/149 (97%)
 Frame = +3

Query: 354 MWTNVFKIGSLHQISWFQFLPHEPDMNPLPDKSVKVDQKDAAMLLVLSSHLQLQKEGFLS 533
           MWTNVFKIGS+HQISWFQFLPHEPD+NPLPDKSVKVDQKDAAMLLVLSSHLQLQKEGFLS
Sbjct: 1   MWTNVFKIGSMHQISWFQFLPHEPDLNPLPDKSVKVDQKDAAMLLVLSSHLQLQKEGFLS 60

Query: 534 TWTNSFVGPWDPSQGLHNPDEKIKLWLFLPGRHSSIVETAQPALSGLRVVASGLWLAPGD 713
           TWTNSFVGPWDPSQGLHNPDEKIKLWLFL GRHSS+VETAQ A+SGLRVVASGLWLAPGD
Sbjct: 61  TWTNSFVGPWDPSQGLHNPDEKIKLWLFLRGRHSSVVETAQTAVSGLRVVASGLWLAPGD 120

Query: 714 SEEVAAALSQALRNCIERALPGLYYMRFG 800
           SEEVAAALSQALRNCIERAL GLYYMRFG
Sbjct: 121 SEEVAAALSQALRNCIERALLGLYYMRFG 149


>ref|XP_003601606.1| Mediator of RNA polymerase II transcription subunit [Medicago
           truncatula] gi|355490654|gb|AES71857.1| Mediator of RNA
           polymerase II transcription subunit [Medicago
           truncatula]
          Length = 2052

 Score =  284 bits (726), Expect = 2e-74
 Identities = 138/159 (86%), Positives = 143/159 (89%), Gaps = 10/159 (6%)
 Frame = +3

Query: 354 MWTNVFKIGSLHQISWFQFLPHEPDMNPLPDKSVKVDQKDAAMLLVLSSHLQLQKEGFLS 533
           MWTNVFKIGSLHQISWFQFLPHEPD+NPLPDKSVK DQKDAAML+VLSSHLQLQKEGFLS
Sbjct: 1   MWTNVFKIGSLHQISWFQFLPHEPDLNPLPDKSVKADQKDAAMLVVLSSHLQLQKEGFLS 60

Query: 534 TWTNSFVGPWDPSQGLHNPDEKIKLWLFLPGRHSSIVETAQPALSGLR----------VV 683
            WTNSFVGPWDPSQGLHNPDEKIKLWLFLPGRH ++ ETAQPAL+GLR           V
Sbjct: 61  AWTNSFVGPWDPSQGLHNPDEKIKLWLFLPGRHLTVSETAQPALTGLRGITLNRTVVLAV 120

Query: 684 ASGLWLAPGDSEEVAAALSQALRNCIERALPGLYYMRFG 800
           ASGLWLAPGDSEEVAAALSQALRNCIERAL GLYYMRFG
Sbjct: 121 ASGLWLAPGDSEEVAAALSQALRNCIERALLGLYYMRFG 159


>ref|XP_004144140.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           13-like [Cucumis sativus]
          Length = 1926

 Score =  267 bits (682), Expect = 2e-69
 Identities = 127/149 (85%), Positives = 136/149 (91%)
 Frame = +3

Query: 354 MWTNVFKIGSLHQISWFQFLPHEPDMNPLPDKSVKVDQKDAAMLLVLSSHLQLQKEGFLS 533
           MWTN+FKIG LHQISWFQFLP+E D+  LPDKS KV+  DAA  LVLSSH+QLQKEGFLS
Sbjct: 1   MWTNIFKIGGLHQISWFQFLPNESDLITLPDKSAKVEHNDAATFLVLSSHVQLQKEGFLS 60

Query: 534 TWTNSFVGPWDPSQGLHNPDEKIKLWLFLPGRHSSIVETAQPALSGLRVVASGLWLAPGD 713
           TWTNSFVGPWDPSQGLHNPDEKIKLWLFLPGRHSS+VETAQ A+S LRVVASGLW++PGD
Sbjct: 61  TWTNSFVGPWDPSQGLHNPDEKIKLWLFLPGRHSSVVETAQAAVSKLRVVASGLWISPGD 120

Query: 714 SEEVAAALSQALRNCIERALPGLYYMRFG 800
           SEEVAAALSQALRNCIERAL GL YMRFG
Sbjct: 121 SEEVAAALSQALRNCIERALTGLSYMRFG 149


>ref|XP_002283658.2| PREDICTED: uncharacterized protein LOC100263945 [Vitis vinifera]
          Length = 1932

 Score =  267 bits (682), Expect = 2e-69
 Identities = 128/149 (85%), Positives = 135/149 (90%)
 Frame = +3

Query: 354 MWTNVFKIGSLHQISWFQFLPHEPDMNPLPDKSVKVDQKDAAMLLVLSSHLQLQKEGFLS 533
           MWTNVFKIG LH ISWFQFLPHE D+NP  DKSVKV+QKD A L+VLS+HLQLQ+EGFLS
Sbjct: 1   MWTNVFKIGGLHHISWFQFLPHESDLNPPNDKSVKVEQKDPATLVVLSTHLQLQREGFLS 60

Query: 534 TWTNSFVGPWDPSQGLHNPDEKIKLWLFLPGRHSSIVETAQPALSGLRVVASGLWLAPGD 713
           TWTNSFVGPWDPSQGLHNPDEKIKLWLFLPGRHSS+ E AQ A+S LRVVASG WLAPGD
Sbjct: 61  TWTNSFVGPWDPSQGLHNPDEKIKLWLFLPGRHSSVAEAAQVAVSRLRVVASGFWLAPGD 120

Query: 714 SEEVAAALSQALRNCIERALPGLYYMRFG 800
           SEEVAAALSQALRNCIERAL GL YMRFG
Sbjct: 121 SEEVAAALSQALRNCIERALIGLNYMRFG 149


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