BLASTX nr result

ID: Glycyrrhiza24_contig00020666 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00020666
         (886 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003527878.1| PREDICTED: uncharacterized protein LOC100797...   145   2e-32
ref|XP_003602909.1| MscS family inner membrane protein ynaI [Med...    96   1e-17
ref|XP_003526544.1| PREDICTED: uncharacterized protein LOC100777...    95   2e-17
ref|XP_002332475.1| predicted protein [Populus trichocarpa] gi|2...    86   1e-14
ref|XP_003522763.1| PREDICTED: uncharacterized protein LOC100796...    83   1e-13

>ref|XP_003527878.1| PREDICTED: uncharacterized protein LOC100797302 [Glycine max]
          Length = 665

 Score =  145 bits (365), Expect = 2e-32
 Identities = 91/184 (49%), Positives = 110/184 (59%), Gaps = 25/184 (13%)
 Frame = +3

Query: 3    PIRTVQRMSSDSDLEIDPFDDTIFTHSRLKGNRXXXXXXXXXXKSVNS------------ 146
            PIRTVQ+M SD+DL++DPFDDTI T SR K NR             ++            
Sbjct: 463  PIRTVQKMCSDTDLDVDPFDDTIPTRSRSKNNRPFPLINPPYKVKPSTTTNEDKDTKIDE 522

Query: 147  ---------KDKFKSTSQAKTQKTSKSLLPKKERAGSAEKGTTPQVLLTSID----ESSS 287
                     +DKF +TS +  QKTSKS   KKER GS+EKGTT + L  S +    E++S
Sbjct: 523  TLPSDFKVERDKFAATS-SSVQKTSKSQKLKKERVGSSEKGTTSKNLSKSNEFGSGETTS 581

Query: 288  PSKQDEEKXXXXXXXXXXXLDENIVLDVALVGSKRTLAIDEGVISSIPADSQEFAVQQNG 467
            PSK DEEK           L+ENIVLD AL+GSKRTLAIDE +I SIPA+ QE AV Q+G
Sbjct: 582  PSKLDEEKSVMSSSSASHSLEENIVLDAALLGSKRTLAIDEELIQSIPAEPQEVAVHQDG 641

Query: 468  SEPP 479
            SEPP
Sbjct: 642  SEPP 645


>ref|XP_003602909.1| MscS family inner membrane protein ynaI [Medicago truncatula]
            gi|355491957|gb|AES73160.1| MscS family inner membrane
            protein ynaI [Medicago truncatula]
          Length = 716

 Score = 95.5 bits (236), Expect = 1e-17
 Identities = 85/236 (36%), Positives = 105/236 (44%), Gaps = 77/236 (32%)
 Frame = +3

Query: 3    PIRTVQRMSSDSDLEIDPFDDTIFTHSRL----------------------------KGN 98
            PIRTVQ++ S+   E  PF D+IFT SR                             +GN
Sbjct: 461  PIRTVQKIYSEPASENIPFGDSIFTRSRAAVNRPFLLIEPPYKVNGEDKAKPSTRSTRGN 520

Query: 99   RXXXXXXXXXX-----------------KSVNSKDKFKSTSQAKTQ---------KTSKS 200
                                         SVNSKDK KS S A+TQ         KTSK+
Sbjct: 521  EEKDAKVDEPVASDSKSDENFAGTSTSPSSVNSKDKSKSKSDAQTQNMGSDSSVEKTSKT 580

Query: 201  LLPKKERAGSAEKGTTPQV--------------LLTSIDES--------SSPSKQDEEKX 314
            + PKKE AG   KG+T  V              ++T+ + S        SS SKQDEEK 
Sbjct: 581  MQPKKETAGDVGKGSTIPVPKTPAHSVVSETLPVITNHESSRADTASATSSQSKQDEEKS 640

Query: 315  XXXXXXXXXXLDENIVLDVALVGSKRTLAIDEGV-ISSIPADSQEFAVQQNGSEPP 479
                      L+ENI+L VAL GSKRTL I+E +  S   A+SQEFAVQ+NG+ PP
Sbjct: 641  SVPSSAVRTPLEENILLGVALEGSKRTLPIEEEMNPSPNSAESQEFAVQRNGNGPP 696


>ref|XP_003526544.1| PREDICTED: uncharacterized protein LOC100777815 [Glycine max]
          Length = 682

 Score = 94.7 bits (234), Expect = 2e-17
 Identities = 80/214 (37%), Positives = 102/214 (47%), Gaps = 55/214 (25%)
 Frame = +3

Query: 3    PIRTVQRMSSDSDLEIDPFDDTIFTHSRLKGNRXXXXXXXXXXKSVNSKDKFKSTSQAK- 179
            PIRTVQ++ S++D E  PF DTIFT SR   NR            VN +DK K+++++  
Sbjct: 453  PIRTVQKIYSEADSENIPFGDTIFTRSRA-ANRPFLLIEPPY--KVNGEDKVKASTRSTR 509

Query: 180  ----------------------------------TQKTSKSLL---PKKERAGSAEKGTT 248
                                              ++  SKSL    PKKE A  A KGTT
Sbjct: 510  ANEEKDSKIDETMASDTKEDENFTATSTSSPDVISKDKSKSLSDAQPKKENAVDAGKGTT 569

Query: 249  ------------PQVLLTSIDE----SSSPSKQDEEKXXXXXXXXXXXLDENIVLDVALV 380
                        P+  L +  E    +SS SKQDEEK           L+ENI+L VA+ 
Sbjct: 570  VPVSKNLVQSAVPEASLATTQEITSATSSQSKQDEEKSSVSLPSVRPSLEENILLGVAIE 629

Query: 381  GSKRTLAID-EGVISSIPADSQEFAVQQNGSEPP 479
            GSKRTL I+ E   S +PA+SQEFAVQ+NG  PP
Sbjct: 630  GSKRTLPIEGEMTPSPMPAESQEFAVQRNGGGPP 663


>ref|XP_002332475.1| predicted protein [Populus trichocarpa] gi|222832558|gb|EEE71035.1|
           predicted protein [Populus trichocarpa]
          Length = 478

 Score = 85.9 bits (211), Expect = 1e-14
 Identities = 61/173 (35%), Positives = 88/173 (50%), Gaps = 14/173 (8%)
 Frame = +3

Query: 3   PIRTVQRMSSDSDLEIDPFDDTIFTHSRLKGNRXXXXXXXXXXKSVNSKDKFKSTSQ--- 173
           PIRTVQ++  ++DLE  PF D+IFT S    +R            +N +DK K++ +   
Sbjct: 298 PIRTVQKIYGEADLENVPFSDSIFTRSGATASRPLLLIEPFY--KINGEDKVKASHRPLH 355

Query: 174 AKTQKTSKSLLPKKERAGSAEKGTTPQVLLTSIDESS----------SPSKQDEEKXXXX 323
           A  +K +K  + +    G+  KG TP+    + D  S          S +KQD E+    
Sbjct: 356 ANEEKDAKETMGQNSE-GTTSKGATPERSSVAADPESGIERTESPVISQAKQDIERSVAS 414

Query: 324 XXXXXXXLDENIVLDVALVGSKRTLAIDEGV-ISSIPADSQEFAVQQNGSEPP 479
                  L+EN+VL VAL GSKRTL I+E +  S  P +S+E A  +NG  PP
Sbjct: 415 PSVTRPSLEENLVLGVALEGSKRTLPIEEEMDPSPFPIESKELAACRNGGAPP 467


>ref|XP_003522763.1| PREDICTED: uncharacterized protein LOC100796022 [Glycine max]
          Length = 681

 Score = 82.8 bits (203), Expect = 1e-13
 Identities = 58/131 (44%), Positives = 70/131 (53%), Gaps = 17/131 (12%)
 Frame = +3

Query: 138 VNSKDKFKSTSQAKTQKTSKSLLPKKERAGSAEKGTTPQVLLTSIDES------------ 281
           VNSKDK KS S+A+         PKKE A  A KG T  V    +  +            
Sbjct: 541 VNSKDKSKSLSEAQ---------PKKENAVDAGKGPTVPVSKNLVQSAAPETSPVTSHEI 591

Query: 282 ----SSPSKQDEEKXXXXXXXXXXXLDENIVLDVALVGSKRTLAIDEGVI-SSIPADSQE 446
               SS SKQDEEK           L+ENI+L VA+ GSKRTL I+E +  S +PA+SQE
Sbjct: 592 NSATSSQSKQDEEKSSVPLSSVRPSLEENILLGVAIEGSKRTLPIEEEMTPSPMPAESQE 651

Query: 447 FAVQQNGSEPP 479
           FAVQ+NG  PP
Sbjct: 652 FAVQRNGGGPP 662


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