BLASTX nr result
ID: Glycyrrhiza24_contig00020660
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza24_contig00020660 (340 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003548373.1| PREDICTED: zinc finger CCCH domain-containin... 84 1e-14 ref|XP_003627367.1| Zinc finger CCCH domain-containing protein [... 76 3e-12 ref|XP_002272277.1| PREDICTED: zinc finger CCCH domain-containin... 64 1e-08 >ref|XP_003548373.1| PREDICTED: zinc finger CCCH domain-containing protein 62-like [Glycine max] Length = 463 Score = 84.0 bits (206), Expect = 1e-14 Identities = 40/58 (68%), Positives = 48/58 (82%), Gaps = 1/58 (1%) Frame = +1 Query: 61 YHGKPLANANHFHHPLMMPNGESY-KQKQLCRHFSRGRCYFFGDNCKFLHDLRDKGNV 231 +H PLANANH ++P+ ESY KQKQ+CRH++RGRCY+ GDNCKFLHDLRDKGNV Sbjct: 409 HHRMPLANANHSQQ--VLPDRESYDKQKQVCRHYARGRCYY-GDNCKFLHDLRDKGNV 463 >ref|XP_003627367.1| Zinc finger CCCH domain-containing protein [Medicago truncatula] gi|355521389|gb|AET01843.1| Zinc finger CCCH domain-containing protein [Medicago truncatula] Length = 396 Score = 75.9 bits (185), Expect = 3e-12 Identities = 42/88 (47%), Positives = 51/88 (57%), Gaps = 18/88 (20%) Frame = +1 Query: 10 KQYRPFIAETNGFAERTYHGKPLANANHF------------------HHPLMMPNGESYK 135 ++Y FIAETN A +Y KPL +ANHF H + N ESY+ Sbjct: 312 ERYNAFIAETNRRA--SYQRKPLTSANHFVPRSANANHFVPRSENANHMHTSISNRESYQ 369 Query: 136 QKQLCRHFSRGRCYFFGDNCKFLHDLRD 219 QKQ CRHF+RGRC+ +GDNCKFLH RD Sbjct: 370 QKQFCRHFARGRCH-YGDNCKFLHGSRD 396 >ref|XP_002272277.1| PREDICTED: zinc finger CCCH domain-containing protein 62 [Vitis vinifera] gi|297742965|emb|CBI35832.3| unnamed protein product [Vitis vinifera] Length = 438 Score = 64.3 bits (155), Expect = 1e-08 Identities = 33/64 (51%), Positives = 40/64 (62%), Gaps = 7/64 (10%) Frame = +1 Query: 46 FAERTYHGKPLANANHFHH--PLM-----MPNGESYKQKQLCRHFSRGRCYFFGDNCKFL 204 FA H +PL + NHF PL MP + KQ+CRH+++GRCY FGDNCKFL Sbjct: 372 FANNHSHREPLRSMNHFPPVIPLQRGYPPMPPSWGHNDKQVCRHYAKGRCY-FGDNCKFL 430 Query: 205 HDLR 216 HDLR Sbjct: 431 HDLR 434