BLASTX nr result

ID: Glycyrrhiza24_contig00020635 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00020635
         (274 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK46126.1| unknown [Medicago truncatula]                           70   2e-10
ref|XP_003554743.1| PREDICTED: probable tRNA threonylcarbamoylad...    62   4e-08
ref|XP_003549722.1| PREDICTED: probable tRNA threonylcarbamoylad...    62   6e-08
ref|XP_003520863.1| PREDICTED: LOW QUALITY PROTEIN: probable tRN...    59   5e-07
gb|AFK42369.1| unknown [Lotus japonicus]                               57   2e-06

>gb|AFK46126.1| unknown [Medicago truncatula]
          Length = 110

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 35/38 (92%), Positives = 36/38 (94%)
 Frame = +1

Query: 1   STALEDSTFTQRFRTDEVKAIWREANLA*SNSLEDKSV 114
           STALEDSTFTQRFRTDEVKAIWREANLA SNSL DK+V
Sbjct: 73  STALEDSTFTQRFRTDEVKAIWREANLAKSNSLADKTV 110


>ref|XP_003554743.1| PREDICTED: probable tRNA threonylcarbamoyladenosine biosynthesis
           protein osgep-like [Glycine max]
          Length = 352

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 31/37 (83%), Positives = 32/37 (86%)
 Frame = +1

Query: 1   STALEDSTFTQRFRTDEVKAIWREANLA*SNSLEDKS 111
           ST LEDSTFTQRFRTDEVKAIWREANLA  N L +KS
Sbjct: 315 STPLEDSTFTQRFRTDEVKAIWREANLAKLNGLAEKS 351


>ref|XP_003549722.1| PREDICTED: probable tRNA threonylcarbamoyladenosine biosynthesis
           protein osgep-like [Glycine max]
          Length = 352

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 30/38 (78%), Positives = 32/38 (84%)
 Frame = +1

Query: 1   STALEDSTFTQRFRTDEVKAIWREANLA*SNSLEDKSV 114
           ST LEDSTFTQRFRTDEVKAIWREANL   N L +KS+
Sbjct: 315 STPLEDSTFTQRFRTDEVKAIWREANLENLNGLAEKSI 352


>ref|XP_003520863.1| PREDICTED: LOW QUALITY PROTEIN: probable tRNA
           threonylcarbamoyladenosine biosynthesis protein
           osgep-like [Glycine max]
          Length = 239

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 29/37 (78%), Positives = 31/37 (83%)
 Frame = +1

Query: 1   STALEDSTFTQRFRTDEVKAIWREANLA*SNSLEDKS 111
           ST LEDSTFTQRFRT+EVKAIWRE NLA  N L +KS
Sbjct: 202 STPLEDSTFTQRFRTNEVKAIWREENLAKLNGLAEKS 238


>gb|AFK42369.1| unknown [Lotus japonicus]
          Length = 141

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 27/28 (96%), Positives = 27/28 (96%)
 Frame = +1

Query: 1   STALEDSTFTQRFRTDEVKAIWREANLA 84
           ST LEDSTFTQRFRTDEVKAIWREANLA
Sbjct: 113 STPLEDSTFTQRFRTDEVKAIWREANLA 140


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