BLASTX nr result

ID: Glycyrrhiza24_contig00020618 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00020618
         (518 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK36710.1| unknown [Lotus japonicus]                              115   3e-24
ref|XP_002304133.1| predicted protein [Populus trichocarpa] gi|2...   114   8e-24
ref|XP_002339178.1| predicted protein [Populus trichocarpa] gi|2...   110   1e-22
ref|XP_002299588.1| predicted protein [Populus trichocarpa] gi|2...   110   1e-22
ref|XP_003627297.1| Serine rich protein [Medicago truncatula] gi...   100   9e-20

>gb|AFK36710.1| unknown [Lotus japonicus]
          Length = 124

 Score =  115 bits (289), Expect = 3e-24
 Identities = 71/127 (55%), Positives = 76/127 (59%), Gaps = 3/127 (2%)
 Frame = +1

Query: 25  MATTYA-SSSHGSSQRXXXXXXXXXXXXXXXXXXXNPRSDHRRHYYYESKWSSGFVLPVV 201
           MATTYA SS +GSSQR                   N RSD R   +YESKWSSGFVLP+V
Sbjct: 1   MATTYAHSSQYGSSQRSLGIVMALVSAVVLSPLYANSRSDRR---HYESKWSSGFVLPMV 57

Query: 202 LAGLIIAIRTTXXXXXXXXXXXXXXXXXXX--WALRIGSSSWGLAGVLIMLMLVLYWQAS 375
           LAGLIIAIRTT                     W LRIGSSSWGLA VL+MLMLV  W+AS
Sbjct: 58  LAGLIIAIRTTSSSRSSVSSPRASLLPSPEPSWVLRIGSSSWGLAMVLVMLMLVHNWKAS 117

Query: 376 VQEFFWR 396
           VQEFFWR
Sbjct: 118 VQEFFWR 124


>ref|XP_002304133.1| predicted protein [Populus trichocarpa] gi|222841565|gb|EEE79112.1|
           predicted protein [Populus trichocarpa]
          Length = 128

 Score =  114 bits (285), Expect = 8e-24
 Identities = 67/128 (52%), Positives = 74/128 (57%), Gaps = 4/128 (3%)
 Frame = +1

Query: 25  MATTYASS--SHGSSQRXXXXXXXXXXXXXXXXXXXNPRSDHRRHYYYESKWSSGFVLPV 198
           MAT   SS  S  SSQR                     ++DH R++ YE+KWSSGFVLP+
Sbjct: 1   MATDACSSTASQNSSQRVLAMVFALASAVVLSPLYVKRKNDHTRYFNYETKWSSGFVLPM 60

Query: 199 VLAGLIIAIRTTXXXXXXXXXXXXXXXXXXX--WALRIGSSSWGLAGVLIMLMLVLYWQA 372
           VLAGLIIAIRTT                     W LRIGSSSWGLAGVL+MLMLVL WQ 
Sbjct: 61  VLAGLIIAIRTTSSSMSARRGSRASFIPSPDPSWVLRIGSSSWGLAGVLVMLMLVLSWQD 120

Query: 373 SVQEFFWR 396
           SVQEFFWR
Sbjct: 121 SVQEFFWR 128


>ref|XP_002339178.1| predicted protein [Populus trichocarpa] gi|222874559|gb|EEF11690.1|
           predicted protein [Populus trichocarpa]
          Length = 128

 Score =  110 bits (275), Expect = 1e-22
 Identities = 65/128 (50%), Positives = 72/128 (56%), Gaps = 4/128 (3%)
 Frame = +1

Query: 25  MATTYASS--SHGSSQRXXXXXXXXXXXXXXXXXXXNPRSDHRRHYYYESKWSSGFVLPV 198
           MAT   SS  S  SSQR                     ++DH R++ YE+ WSSGFVLP+
Sbjct: 1   MATDACSSTASQNSSQRVLAMVFALASAVVLSPLYVKRKNDHTRYFNYETNWSSGFVLPM 60

Query: 199 VLAGLIIAIRTTXXXXXXXXXXXXXXXXXXX--WALRIGSSSWGLAGVLIMLMLVLYWQA 372
           VLAGLIIAIRTT                     W LRIGSS WGLAGVL+MLMLVL WQ 
Sbjct: 61  VLAGLIIAIRTTSSSMSARRGSRASFIPSPDPSWVLRIGSSPWGLAGVLVMLMLVLSWQD 120

Query: 373 SVQEFFWR 396
           SVQEFFWR
Sbjct: 121 SVQEFFWR 128


>ref|XP_002299588.1| predicted protein [Populus trichocarpa] gi|222846846|gb|EEE84393.1|
           predicted protein [Populus trichocarpa]
          Length = 127

 Score =  110 bits (275), Expect = 1e-22
 Identities = 63/127 (49%), Positives = 75/127 (59%), Gaps = 3/127 (2%)
 Frame = +1

Query: 25  MAT-TYASSSHGSSQRXXXXXXXXXXXXXXXXXXXNPRSDHRRHYYYESKWSSGFVLPVV 201
           MAT  Y+++S  SSQR                     ++DH  ++ +E+KWSSGFVLP+V
Sbjct: 1   MATYAYSAASRNSSQRALAMVLALASAVVLSPLYVKRKNDHTGYFNHETKWSSGFVLPMV 60

Query: 202 LAGLIIAIRTTXXXXXXXXXXXXXXXXXXX--WALRIGSSSWGLAGVLIMLMLVLYWQAS 375
           LAGLIIAIRTT                     W LRIGSSSWGLAGVL+ML+LVL WQ S
Sbjct: 61  LAGLIIAIRTTSSSMSVHRGAAASFIPSPDPSWVLRIGSSSWGLAGVLVMLVLVLSWQDS 120

Query: 376 VQEFFWR 396
           VQEFFWR
Sbjct: 121 VQEFFWR 127


>ref|XP_003627297.1| Serine rich protein [Medicago truncatula]
           gi|66947623|emb|CAJ00007.1| serine rich protein
           [Medicago truncatula] gi|355521319|gb|AET01773.1| Serine
           rich protein [Medicago truncatula]
          Length = 127

 Score =  100 bits (250), Expect = 9e-20
 Identities = 62/130 (47%), Positives = 71/130 (54%), Gaps = 6/130 (4%)
 Frame = +1

Query: 25  MATTYASSSHGSSQRXXXXXXXXXXXXXXXXXXXNPRSDHRRHYYYESKW-SSGFVLPVV 201
           M + YASS+HGSSQR                   N +SD R   YYESKW SSGFVLP++
Sbjct: 1   MDSNYASSNHGSSQRSLAMVLALVSAVVLSPLYVNSKSDRR---YYESKWTSSGFVLPMI 57

Query: 202 LAGLIIAIRTTXXXXXXXXXXXXXXXXXXX-----WALRIGSSSWGLAGVLIMLMLVLYW 366
           L GLIIAI+ T                          LRIGSSSWGLA VL+MLMLVL+W
Sbjct: 58  LFGLIIAIKRTSSSSSSCVSSSSTKGSLLPSHDPSLVLRIGSSSWGLAAVLVMLMLVLHW 117

Query: 367 QASVQEFFWR 396
           Q SVQE  W+
Sbjct: 118 QGSVQELLWK 127


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