BLASTX nr result

ID: Glycyrrhiza24_contig00020598 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00020598
         (525 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003525181.1| PREDICTED: ribosomal RNA small subunit methy...   167   1e-39
ref|XP_003550752.1| PREDICTED: LOW QUALITY PROTEIN: ribosomal RN...   160   8e-38
ref|XP_003608919.1| Ribosomal RNA small subunit methyltransferas...   160   8e-38
ref|XP_002283664.2| PREDICTED: ribosomal RNA small subunit methy...   150   1e-34
ref|XP_004152459.1| PREDICTED: ribosomal RNA small subunit methy...   149   2e-34

>ref|XP_003525181.1| PREDICTED: ribosomal RNA small subunit methyltransferase G-like
           [Glycine max]
          Length = 274

 Score =  167 bits (422), Expect = 1e-39
 Identities = 79/88 (89%), Positives = 85/88 (96%)
 Frame = +2

Query: 2   SEMRILAEYCLPLVRVGGLFIAAKGHDPEDEVRKAESAIQKMGASLLQVCPVESQSPYGQ 181
           +EMRILAEYCLPLVRVGGLFIAAKGHDPEDE++KAESAIQK+GASLLQVC VESQSPYGQ
Sbjct: 187 AEMRILAEYCLPLVRVGGLFIAAKGHDPEDEIKKAESAIQKVGASLLQVCSVESQSPYGQ 246

Query: 182 RTAVICLKNRPTPGKYPRDPGTPAKEPL 265
           RTAV+C K+RPTP KYPRDPGTPAKEPL
Sbjct: 247 RTAVVCSKDRPTPMKYPRDPGTPAKEPL 274


>ref|XP_003550752.1| PREDICTED: LOW QUALITY PROTEIN: ribosomal RNA small subunit
           methyltransferase G-like [Glycine max]
          Length = 263

 Score =  160 bits (406), Expect = 8e-38
 Identities = 77/88 (87%), Positives = 83/88 (94%)
 Frame = +2

Query: 2   SEMRILAEYCLPLVRVGGLFIAAKGHDPEDEVRKAESAIQKMGASLLQVCPVESQSPYGQ 181
           +EMRILAEYCLPLVRVGGLFIAAKGHDPEDE++KAESAIQK+GASLLQVC VESQSPYGQ
Sbjct: 176 AEMRILAEYCLPLVRVGGLFIAAKGHDPEDEIKKAESAIQKVGASLLQVCSVESQSPYGQ 235

Query: 182 RTAVICLKNRPTPGKYPRDPGTPAKEPL 265
           RTAVIC K+RPTP KYPRDP  PAKEP+
Sbjct: 236 RTAVICSKDRPTPIKYPRDPCAPAKEPM 263


>ref|XP_003608919.1| Ribosomal RNA small subunit methyltransferase G [Medicago
           truncatula] gi|355509974|gb|AES91116.1| Ribosomal RNA
           small subunit methyltransferase G [Medicago truncatula]
          Length = 518

 Score =  160 bits (406), Expect = 8e-38
 Identities = 76/88 (86%), Positives = 84/88 (95%)
 Frame = +2

Query: 2   SEMRILAEYCLPLVRVGGLFIAAKGHDPEDEVRKAESAIQKMGASLLQVCPVESQSPYGQ 181
           +E R+LAEYCLPLVRVGG+FIAAKGHDPEDEV+KAE+AI+KMGASLLQVC VESQSPYGQ
Sbjct: 418 AETRVLAEYCLPLVRVGGMFIAAKGHDPEDEVKKAENAIKKMGASLLQVCSVESQSPYGQ 477

Query: 182 RTAVICLKNRPTPGKYPRDPGTPAKEPL 265
           RTAVICLK+RPTP KYPR PGTP+KEPL
Sbjct: 478 RTAVICLKDRPTPMKYPRFPGTPSKEPL 505


>ref|XP_002283664.2| PREDICTED: ribosomal RNA small subunit methyltransferase G-like
           [Vitis vinifera] gi|297733841|emb|CBI15088.3| unnamed
           protein product [Vitis vinifera]
          Length = 285

 Score =  150 bits (378), Expect = 1e-34
 Identities = 69/88 (78%), Positives = 79/88 (89%)
 Frame = +2

Query: 2   SEMRILAEYCLPLVRVGGLFIAAKGHDPEDEVRKAESAIQKMGASLLQVCPVESQSPYGQ 181
           +EMRILAEYCLPLVRVGGLF+AAKGHDP++EVR AE AIQ MGAS+LQ+C VES SP+GQ
Sbjct: 198 AEMRILAEYCLPLVRVGGLFLAAKGHDPQEEVRNAERAIQLMGASVLQLCSVESHSPFGQ 257

Query: 182 RTAVICLKNRPTPGKYPRDPGTPAKEPL 265
           RTA++CLK+ PTP KYPRDPGTP K PL
Sbjct: 258 RTAIVCLKDCPTPRKYPRDPGTPVKSPL 285


>ref|XP_004152459.1| PREDICTED: ribosomal RNA small subunit methyltransferase G-like
           [Cucumis sativus] gi|449527787|ref|XP_004170891.1|
           PREDICTED: ribosomal RNA small subunit methyltransferase
           G-like [Cucumis sativus]
          Length = 281

 Score =  149 bits (376), Expect = 2e-34
 Identities = 70/88 (79%), Positives = 76/88 (86%)
 Frame = +2

Query: 2   SEMRILAEYCLPLVRVGGLFIAAKGHDPEDEVRKAESAIQKMGASLLQVCPVESQSPYGQ 181
           +EMRILAEYCLP+VRVGGLF+AAKGHDP  EV  AE AI+ MGASLLQ+CPVES SPYGQ
Sbjct: 194 AEMRILAEYCLPMVRVGGLFLAAKGHDPLAEVTNAEKAIEMMGASLLQICPVESHSPYGQ 253

Query: 182 RTAVICLKNRPTPGKYPRDPGTPAKEPL 265
           RTAV+C K R TP KYPRDPGTPAK PL
Sbjct: 254 RTAVVCFKERHTPRKYPRDPGTPAKSPL 281


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