BLASTX nr result

ID: Glycyrrhiza24_contig00020589 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00020589
         (559 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003595582.1| Polyadenylate-binding protein [Medicago trun...   283   1e-74
ref|XP_003595581.1| Polyadenylate-binding protein [Medicago trun...   283   1e-74
ref|XP_003533847.1| PREDICTED: protein MEI2-like 2-like [Glycine...   282   3e-74
ref|XP_003546575.1| PREDICTED: protein MEI2-like 2-like [Glycine...   281   4e-74
gb|AAT39004.1| AML1 [Citrus unshiu]                                   252   3e-65

>ref|XP_003595582.1| Polyadenylate-binding protein [Medicago truncatula]
           gi|355484630|gb|AES65833.1| Polyadenylate-binding
           protein [Medicago truncatula]
          Length = 764

 Score =  283 bits (724), Expect = 1e-74
 Identities = 137/163 (84%), Positives = 148/163 (90%)
 Frame = +2

Query: 71  YMVNTGGSVNAGVSMPRNMPDNGSSNFTMRSSPRLNPVFLSNSPYAGLLPAAMESLTDRA 250
           YM+N+G S N G+S+PRNMPDNGSSNF MRSSP L+PVFL N PY GLLP AMES TDR 
Sbjct: 507 YMLNSGISGNVGISIPRNMPDNGSSNFRMRSSPILSPVFLGNGPYPGLLPTAMESFTDRV 566

Query: 251 WSSRWIENNGSQVDSKQQFQLDLDKIKSGEDTRTTLMIKNIPNKYTSKMLLAAIDENHRG 430
             SRWI+NNGSQVD+K+ FQLDLDKI+SGEDTRTTLMIKNIPNKYTSKMLLAAIDENH+G
Sbjct: 567 -RSRWIDNNGSQVDNKKLFQLDLDKIRSGEDTRTTLMIKNIPNKYTSKMLLAAIDENHKG 625

Query: 431 TYDFLYLPIDFKNKCNVGYAFINMLSPLLIIPFYETFNGKKWE 559
           TYDFLYLPIDFKNKCNVGYAFINMLSP LIIPFYETF+GKKWE
Sbjct: 626 TYDFLYLPIDFKNKCNVGYAFINMLSPSLIIPFYETFHGKKWE 668


>ref|XP_003595581.1| Polyadenylate-binding protein [Medicago truncatula]
            gi|47834691|gb|AAT38999.1| AML5 [Medicago truncatula]
            gi|87241360|gb|ABD33218.1| RNA-binding region RNP-1 (RNA
            recognition motif); RNA recognition motif 2 [Medicago
            truncatula] gi|355484629|gb|AES65832.1|
            Polyadenylate-binding protein [Medicago truncatula]
          Length = 865

 Score =  283 bits (724), Expect = 1e-74
 Identities = 137/163 (84%), Positives = 148/163 (90%)
 Frame = +2

Query: 71   YMVNTGGSVNAGVSMPRNMPDNGSSNFTMRSSPRLNPVFLSNSPYAGLLPAAMESLTDRA 250
            YM+N+G S N G+S+PRNMPDNGSSNF MRSSP L+PVFL N PY GLLP AMES TDR 
Sbjct: 608  YMLNSGISGNVGISIPRNMPDNGSSNFRMRSSPILSPVFLGNGPYPGLLPTAMESFTDRV 667

Query: 251  WSSRWIENNGSQVDSKQQFQLDLDKIKSGEDTRTTLMIKNIPNKYTSKMLLAAIDENHRG 430
              SRWI+NNGSQVD+K+ FQLDLDKI+SGEDTRTTLMIKNIPNKYTSKMLLAAIDENH+G
Sbjct: 668  -RSRWIDNNGSQVDNKKLFQLDLDKIRSGEDTRTTLMIKNIPNKYTSKMLLAAIDENHKG 726

Query: 431  TYDFLYLPIDFKNKCNVGYAFINMLSPLLIIPFYETFNGKKWE 559
            TYDFLYLPIDFKNKCNVGYAFINMLSP LIIPFYETF+GKKWE
Sbjct: 727  TYDFLYLPIDFKNKCNVGYAFINMLSPSLIIPFYETFHGKKWE 769


>ref|XP_003533847.1| PREDICTED: protein MEI2-like 2-like [Glycine max]
          Length = 862

 Score =  282 bits (721), Expect = 3e-74
 Identities = 137/163 (84%), Positives = 144/163 (88%)
 Frame = +2

Query: 71   YMVNTGGSVNAGVSMPRNMPDNGSSNFTMRSSPRLNPVFLSNSPYAGLLPAAMESLTDRA 250
            YMVN GGSVN   ++PRN+ DNGSSN  MRSSPRL+PVFL N PY GL P  +ESL DRA
Sbjct: 605  YMVNAGGSVNPNTTIPRNISDNGSSNLRMRSSPRLSPVFLGNGPYPGLPPTTLESLADRA 664

Query: 251  WSSRWIENNGSQVDSKQQFQLDLDKIKSGEDTRTTLMIKNIPNKYTSKMLLAAIDENHRG 430
              SRWIENNGSQVDSK+QFQLDLDKI+SGEDTRTTLMIKNIPNKYTSKMLLAAIDENHRG
Sbjct: 665  -RSRWIENNGSQVDSKKQFQLDLDKIRSGEDTRTTLMIKNIPNKYTSKMLLAAIDENHRG 723

Query: 431  TYDFLYLPIDFKNKCNVGYAFINMLSPLLIIPFYETFNGKKWE 559
             YDFLYLPIDFK KCNVGYAFINMLSP LIIPFYETFNGKKWE
Sbjct: 724  AYDFLYLPIDFKKKCNVGYAFINMLSPFLIIPFYETFNGKKWE 766


>ref|XP_003546575.1| PREDICTED: protein MEI2-like 2-like [Glycine max]
          Length = 862

 Score =  281 bits (720), Expect = 4e-74
 Identities = 136/163 (83%), Positives = 147/163 (90%)
 Frame = +2

Query: 71   YMVNTGGSVNAGVSMPRNMPDNGSSNFTMRSSPRLNPVFLSNSPYAGLLPAAMESLTDRA 250
            +MVN GGSVN  +++PRN+ DNGSSNF MRSSPRL+PVFL N P+ GL P  +E L DRA
Sbjct: 604  HMVNVGGSVNPNITIPRNISDNGSSNFRMRSSPRLSPVFLGNGPFPGLPPTTLEGLADRA 663

Query: 251  WSSRWIENNGSQVDSKQQFQLDLDKIKSGEDTRTTLMIKNIPNKYTSKMLLAAIDENHRG 430
              SRWIENNGSQVDSK+QFQL+LDKIKSGEDTRTTLMIKNIPNKYTSKMLLAAIDENHRG
Sbjct: 664  -RSRWIENNGSQVDSKKQFQLNLDKIKSGEDTRTTLMIKNIPNKYTSKMLLAAIDENHRG 722

Query: 431  TYDFLYLPIDFKNKCNVGYAFINMLSPLLIIPFYETFNGKKWE 559
            TYDFLYLPIDFKNKCNVGYAFINMLSP LIIPF+ETFNGKKWE
Sbjct: 723  TYDFLYLPIDFKNKCNVGYAFINMLSPSLIIPFFETFNGKKWE 765


>gb|AAT39004.1| AML1 [Citrus unshiu]
          Length = 858

 Score =  252 bits (643), Expect = 3e-65
 Identities = 125/165 (75%), Positives = 140/165 (84%), Gaps = 2/165 (1%)
 Frame = +2

Query: 71   YMVNTGG--SVNAGVSMPRNMPDNGSSNFTMRSSPRLNPVFLSNSPYAGLLPAAMESLTD 244
            +MVN G   SVN G+++PRN+ DNGSS F + SSPRL+PVFL N PY GL PA  E L +
Sbjct: 601  FMVNMGSRASVNPGITVPRNLSDNGSS-FRVMSSPRLSPVFLGNGPYPGLTPANSEGLYE 659

Query: 245  RAWSSRWIENNGSQVDSKQQFQLDLDKIKSGEDTRTTLMIKNIPNKYTSKMLLAAIDENH 424
            R  S R   NNG+Q+DSK+QFQL+L+KI+SGEDTRTTLMIKNIPNKYTSKMLLAAIDENH
Sbjct: 660  RGRSRRIENNNGNQIDSKKQFQLELEKIRSGEDTRTTLMIKNIPNKYTSKMLLAAIDENH 719

Query: 425  RGTYDFLYLPIDFKNKCNVGYAFINMLSPLLIIPFYETFNGKKWE 559
            +GTYDFLYLPIDFKNKCNVGYAFINMLSPL IIPFYE FNGKKWE
Sbjct: 720  KGTYDFLYLPIDFKNKCNVGYAFINMLSPLHIIPFYEAFNGKKWE 764


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