BLASTX nr result
ID: Glycyrrhiza24_contig00020583
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza24_contig00020583
(1276 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003550468.1| PREDICTED: sister chromatid cohesion protein... 371 e-100
ref|XP_003529677.1| PREDICTED: sister chromatid cohesion protein... 370 e-100
ref|XP_003637596.1| Sister chromatid cohesion protein PDS5-like ... 355 2e-95
ref|XP_003637595.1| Sister chromatid cohesion protein PDS5-like ... 354 2e-95
ref|XP_003547294.1| PREDICTED: sister chromatid cohesion protein... 284 3e-74
>ref|XP_003550468.1| PREDICTED: sister chromatid cohesion protein PDS5 homolog B-like
[Glycine max]
Length = 1642
Score = 371 bits (953), Expect = e-100
Identities = 206/320 (64%), Positives = 227/320 (70%), Gaps = 23/320 (7%)
Frame = +2
Query: 2 STKKWKRKSIAGLTKCTTKEGEIDTEDLIGCRIKVWWPMDKKFYGGTIKSYDPLKEKHVI 181
S KK KRKSI+GL KC TKEGEIDTEDLIGCRIKVWWP DKKFYGGTIKSYDPLK KHVI
Sbjct: 1328 SAKKGKRKSISGLAKCMTKEGEIDTEDLIGCRIKVWWPTDKKFYGGTIKSYDPLKGKHVI 1387
Query: 182 LYDDGDVEILRLKKERWELIDKGRKSTKKTKPSSHEK-------------------VNGK 304
LYDDGDVEILRL+KERWELIDKGRKS KK K SS E +NGK
Sbjct: 1388 LYDDGDVEILRLEKERWELIDKGRKSIKKLKLSSLEATGQKHKGSSGSQSKRAKKIINGK 1447
Query: 305 QSPSKPLKRGQKRASKSNFHQEDAKETSEISNPEETMTSKANDM-DXXXXXXXXXXXXXX 481
QSPSKP+ KRASK+ HQED KETS ISNPEET TSKA+ M
Sbjct: 1448 QSPSKPV----KRASKNKLHQEDTKETSNISNPEETTTSKADKMYSGGSDEEFNGGFNEI 1503
Query: 482 XXXXXXXXXXVRPVSRGKRTKKNKSFHYSEESDEENKHDHGERPSEDIESVWQCSSEERE 661
+ VSRGKR KK K+FHY +E++EE K D+ ER SED ESV Q SSEE+E
Sbjct: 1504 TTKEKKSNKNTKSVSRGKRLKKEKNFHYRKETNEE-KQDYSERLSEDRESVPQGSSEEKE 1562
Query: 662 MDESTEALRENVNGEEDSHSEGHQDNSDVGVDPREMEKSHIEPS-SP--DGGASIAEISD 832
+DES+ ALR+N+NGEE+S SEGH DNSD G +PREMEKSH+EPS SP D +I EISD
Sbjct: 1563 VDESSGALRQNINGEEESDSEGHHDNSDAGSNPREMEKSHLEPSKSPHDDDNKTIPEISD 1622
Query: 833 DTPLSKWKRRTGKKSSGKTQ 892
D PLSKWK RTGKKSSGK Q
Sbjct: 1623 DVPLSKWKCRTGKKSSGKEQ 1642
>ref|XP_003529677.1| PREDICTED: sister chromatid cohesion protein PDS5 homolog B-like
[Glycine max]
Length = 1641
Score = 370 bits (951), Expect = e-100
Identities = 210/320 (65%), Positives = 227/320 (70%), Gaps = 23/320 (7%)
Frame = +2
Query: 2 STKKWKRKSIAGLTKCTTKEGEIDTEDLIGCRIKVWWPMDKKFYGGTIKSYDPLKEKHVI 181
STKK KRKSI+GL KCTTKEGEIDTEDLIGCRIKVWWP DKKFYGGTIKSYDPLK KHVI
Sbjct: 1328 STKKGKRKSISGLAKCTTKEGEIDTEDLIGCRIKVWWPTDKKFYGGTIKSYDPLKGKHVI 1387
Query: 182 LYDDGDVEILRLKKERWELIDKGRKSTKKTKPSSHEK-------------------VNGK 304
LYDDGDVEILRL+KERWELIDKGRKS KK K SS E +NGK
Sbjct: 1388 LYDDGDVEILRLEKERWELIDKGRKSIKKIKLSSFEASGQKHKGSSGSQSKKAKKIINGK 1447
Query: 305 QSPSKPLKRGQKRASKSNFHQEDAKETSEISNPEETMTSKANDM-DXXXXXXXXXXXXXX 481
QSPSKP+ KRASK+NFHQEDAKE S+ISNPEET TSKA++M
Sbjct: 1448 QSPSKPV----KRASKNNFHQEDAKEPSKISNPEETTTSKADEMYSGGSDEELTGGFNEI 1503
Query: 482 XXXXXXXXXXVRPVSRGKRTKKNKSFHYSEESDEENKHDHGERPSEDIESVWQCSSEERE 661
+ +SRGKR K K+FHY+EESDEE K D R SED ESV Q SSEERE
Sbjct: 1504 MTKEKKSNKNTKSISRGKRLNKEKNFHYTEESDEE-KQDCSGRLSEDRESVPQGSSEERE 1562
Query: 662 MDESTEALRENVNGEEDSHSEGHQDNSDVGVDPREMEKSHIEPS-SP--DGGASIAEISD 832
+DES+ ALREN+NG+E SEGH DNS PREMEKSHIEPS SP D +IAEISD
Sbjct: 1563 VDESSGALRENINGQE-FDSEGHHDNSKADRSPREMEKSHIEPSKSPDDDDDDTIAEISD 1621
Query: 833 DTPLSKWKRRTGKKSSGKTQ 892
D PLSKWK RTGKKSSGK Q
Sbjct: 1622 DVPLSKWKHRTGKKSSGKEQ 1641
>ref|XP_003637596.1| Sister chromatid cohesion protein PDS5-like protein [Medicago
truncatula] gi|355503531|gb|AES84734.1| Sister chromatid
cohesion protein PDS5-like protein [Medicago truncatula]
Length = 992
Score = 355 bits (910), Expect = 2e-95
Identities = 196/315 (62%), Positives = 224/315 (71%), Gaps = 19/315 (6%)
Frame = +2
Query: 5 TKKWKRKSIAGLTKCTTKEGEIDTEDLIGCRIKVWWPMDKKFYGGTIKSYDPLKEKHVIL 184
+KK KRK +AGLTKC K GEID+EDLIGCRIK+WWP DKK+YGGTIKSYD LK KHVIL
Sbjct: 684 SKKTKRKRVAGLTKCAMKRGEIDSEDLIGCRIKIWWPTDKKYYGGTIKSYDSLKRKHVIL 743
Query: 185 YDDGDVEILRLKKERWELIDKGRKSTKKTKPSSHEK-------------------VNGKQ 307
Y+DGDVEILRL+KERWEL+DKGRKSTKK K SS E VNGKQ
Sbjct: 744 YEDGDVEILRLEKERWELLDKGRKSTKKIKRSSLETSGHKLKGSSGSPSKKKKKIVNGKQ 803
Query: 308 SPSKPLKRGQKRASKSNFHQEDAKETSEISNPEETMTSKANDMDXXXXXXXXXXXXXXXX 487
SPSKP K +K ASKS+F+QE AKETSEISNPEETM SKA++ D
Sbjct: 804 SPSKPAKPRKKYASKSDFYQEQAKETSEISNPEETMISKADETD--SEEELTAVHNEITK 861
Query: 488 XXXXXXXXVRPVSRGKRTKKNKSFHYSEESDEENKHDHGERPSEDIESVWQCSSEEREMD 667
VR V RGKR KK K+FH+ EESD++ K D+ ER SED ESV Q SSEE+++D
Sbjct: 862 KGKKSNKKVRSVPRGKRLKKTKNFHHIEESDDD-KRDYNERISEDRESVPQYSSEEKKVD 920
Query: 668 ESTEALRENVNGEEDSHSEGHQDNSDVGVDPREMEKSHIEPSSPDGGASIAEISDDTPLS 847
ES+E RE+V+GEE+S SEG QDNSDVG P E E+SHIEPSSPD SIAEISD+ PL
Sbjct: 921 ESSE--RESVHGEEESESEGEQDNSDVGDSPGETERSHIEPSSPD-DVSIAEISDNIPLI 977
Query: 848 KWKRRTGKKSSGKTQ 892
KW R GKKSSGK +
Sbjct: 978 KWNCRKGKKSSGKVR 992
>ref|XP_003637595.1| Sister chromatid cohesion protein PDS5-like protein [Medicago
truncatula] gi|355503530|gb|AES84733.1| Sister chromatid
cohesion protein PDS5-like protein [Medicago truncatula]
Length = 995
Score = 354 bits (909), Expect = 2e-95
Identities = 196/316 (62%), Positives = 224/316 (70%), Gaps = 20/316 (6%)
Frame = +2
Query: 5 TKKWKRKSIAGLTKCTTKEGEIDTEDLIGCRIKVWWPMDKKFYGGTIKSYDPLKEKHVIL 184
+KK KRK +AGLTKC K GEID+EDLIGCRIK+WWP DKK+YGGTIKSYD LK KHVIL
Sbjct: 684 SKKTKRKRVAGLTKCAMKRGEIDSEDLIGCRIKIWWPTDKKYYGGTIKSYDSLKRKHVIL 743
Query: 185 YDDGDVEILRLKKERWELIDKGRKSTKKTKPSSHEK-------------------VNGKQ 307
Y+DGDVEILRL+KERWEL+DKGRKSTKK K SS E VNGKQ
Sbjct: 744 YEDGDVEILRLEKERWELLDKGRKSTKKIKRSSLETSGHKLKGSSGSPSKKKKKIVNGKQ 803
Query: 308 SPSKPLKRGQKRASKSNFHQEDAKETSEISNPEETMTSKANDMD-XXXXXXXXXXXXXXX 484
SPSKP K +K ASKS+F+QE AKETSEISNPEETM SKA++ D
Sbjct: 804 SPSKPAKPRKKYASKSDFYQEQAKETSEISNPEETMISKADETDSGGSEEELTAVHNEIT 863
Query: 485 XXXXXXXXXVRPVSRGKRTKKNKSFHYSEESDEENKHDHGERPSEDIESVWQCSSEEREM 664
VR V RGKR KK K+FH+ EESD++ K D+ ER SED ESV Q SSEE+++
Sbjct: 864 KKGKKSNKKVRSVPRGKRLKKTKNFHHIEESDDD-KRDYNERISEDRESVPQYSSEEKKV 922
Query: 665 DESTEALRENVNGEEDSHSEGHQDNSDVGVDPREMEKSHIEPSSPDGGASIAEISDDTPL 844
DES+E RE+V+GEE+S SEG QDNSDVG P E E+SHIEPSSPD SIAEISD+ PL
Sbjct: 923 DESSE--RESVHGEEESESEGEQDNSDVGDSPGETERSHIEPSSPD-DVSIAEISDNIPL 979
Query: 845 SKWKRRTGKKSSGKTQ 892
KW R GKKSSGK +
Sbjct: 980 IKWNCRKGKKSSGKVR 995
>ref|XP_003547294.1| PREDICTED: sister chromatid cohesion protein PDS5 homolog B-like
[Glycine max]
Length = 1656
Score = 284 bits (727), Expect = 3e-74
Identities = 170/330 (51%), Positives = 202/330 (61%), Gaps = 35/330 (10%)
Frame = +2
Query: 2 STKKWKRKSIAGLTKCTTKEGEIDTEDLIGCRIKVWWPMDKKFYGGTIKSYDPLKEKHVI 181
STKK KRKSI GL KCTTKEGE D EDLIGCRIKVWWP+DKKFY GT+KSYD LK KHVI
Sbjct: 1329 STKKLKRKSIGGLAKCTTKEGESDAEDLIGCRIKVWWPLDKKFYEGTVKSYDSLKRKHVI 1388
Query: 182 LYDDGDVEILRLKKERWELID----------------------KGRKSTKKTKPSSHEKV 295
LY+DGDVE+L L+KERWEL D K R S+ + + V
Sbjct: 1389 LYNDGDVEVLNLEKERWELSDSKPTKKLKLSKTVSSPEVSTGKKQRSSSGSASKKTKKIV 1448
Query: 296 NGKQSPSKPLKRGQKRASKSNFHQEDAKETSEISNPEETMTSKANDMDXXXXXXXXXXXX 475
NGK+SPS +K GQK ASK+N H EDAKE+SE+SNPE+ SKA
Sbjct: 1449 NGKKSPSNHVKHGQKGASKTNSHNEDAKESSELSNPED--ISKAEINSGGSEAEQAEGSD 1506
Query: 476 XXXXXXXXXXXXVRPVSRGKRTKKNKSFHYSEESDEE------NKHDHGER------PSE 619
+ VSRGK+ KK KS Y +ESDEE K DHGER P
Sbjct: 1507 VIVTKQKKSNKKPKSVSRGKKLKKEKSLRYKKESDEEKRESDQEKQDHGERLAEENIPQG 1566
Query: 620 DIESVWQCSSEEREMDESTEALRENVNGEEDSHSEGHQDNSD-VGVDPREMEKSHIEPSS 796
D + SS+E + +ES ALREN N EE+S S G++++SD PRE+EKS IE +S
Sbjct: 1567 DQNDDAESSSKETDGNESRGALRENGN-EEESGSGGNENDSDGEKSSPREVEKSPIESAS 1625
Query: 797 PDGGASIAEISDDTPLSKWKRRTGKKSSGK 886
PD GA IAE+SDD LSKW+R +GKKSSG+
Sbjct: 1626 PD-GAKIAEVSDDELLSKWRRPSGKKSSGQ 1654