BLASTX nr result

ID: Glycyrrhiza24_contig00020575 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00020575
         (335 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003528600.1| PREDICTED: pentatricopeptide repeat-containi...   150   1e-34
emb|CBI35582.3| unnamed protein product [Vitis vinifera]              130   1e-28
ref|XP_004169216.1| PREDICTED: pentatricopeptide repeat-containi...   125   3e-27
ref|XP_004140275.1| PREDICTED: pentatricopeptide repeat-containi...   125   3e-27
ref|XP_002313273.1| predicted protein [Populus trichocarpa] gi|2...   112   3e-23

>ref|XP_003528600.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 813

 Score =  150 bits (378), Expect = 1e-34
 Identities = 66/79 (83%), Positives = 72/79 (91%)
 Frame = -2

Query: 334 EHLFTLKPHHCGYYILLSNMYAEAERWDEANRVRELMKFRGARKSPGCSWVQIGDQVHAF 155
           EHLF LKP HCGYYILLSNMYAEAERWDEAN+VRELMK RGA+K+PGCSWVQ+GD VHAF
Sbjct: 735 EHLFELKPQHCGYYILLSNMYAEAERWDEANKVRELMKSRGAKKNPGCSWVQVGDLVHAF 794

Query: 154 LVGEKIESLDTGFWLSQCC 98
           LVGEKI+SLD  FW+S CC
Sbjct: 795 LVGEKIDSLDDDFWVSDCC 813


>emb|CBI35582.3| unnamed protein product [Vitis vinifera]
          Length = 638

 Score =  130 bits (327), Expect = 1e-28
 Identities = 58/74 (78%), Positives = 62/74 (83%)
 Frame = -2

Query: 334 EHLFTLKPHHCGYYILLSNMYAEAERWDEANRVRELMKFRGARKSPGCSWVQIGDQVHAF 155
           EHLF LKP H GYY LLSNMYAE  RWDEANR+RELMK RG +KSPGCSWVQIG+Q HAF
Sbjct: 536 EHLFELKPEHSGYYTLLSNMYAETGRWDEANRIRELMKSRGVKKSPGCSWVQIGEQAHAF 595

Query: 154 LVGEKIESLDTGFW 113
           +VGEKIE LD G W
Sbjct: 596 VVGEKIEGLDLGLW 609


>ref|XP_004169216.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 684

 Score =  125 bits (315), Expect = 3e-27
 Identities = 54/77 (70%), Positives = 65/77 (84%)
 Frame = -2

Query: 334 EHLFTLKPHHCGYYILLSNMYAEAERWDEANRVRELMKFRGARKSPGCSWVQIGDQVHAF 155
           EHLF LKP HCGYYILLSN+YAE  RWDEAN++RELMK RGA+K+PGCSWVQI DQVHAF
Sbjct: 606 EHLFELKPQHCGYYILLSNIYAETGRWDEANKIRELMKSRGAKKNPGCSWVQIYDQVHAF 665

Query: 154 LVGEKIESLDTGFWLSQ 104
           +  E++E  + G WL++
Sbjct: 666 VAEERVEGFELGDWLAE 682


>ref|XP_004140275.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 833

 Score =  125 bits (315), Expect = 3e-27
 Identities = 54/77 (70%), Positives = 65/77 (84%)
 Frame = -2

Query: 334 EHLFTLKPHHCGYYILLSNMYAEAERWDEANRVRELMKFRGARKSPGCSWVQIGDQVHAF 155
           EHLF LKP HCGYYILLSN+YAE  RWDEAN++RELMK RGA+K+PGCSWVQI DQVHAF
Sbjct: 755 EHLFELKPQHCGYYILLSNIYAETGRWDEANKIRELMKSRGAKKNPGCSWVQIYDQVHAF 814

Query: 154 LVGEKIESLDTGFWLSQ 104
           +  E++E  + G WL++
Sbjct: 815 VAEERVEGFELGDWLAE 831


>ref|XP_002313273.1| predicted protein [Populus trichocarpa] gi|222849681|gb|EEE87228.1|
           predicted protein [Populus trichocarpa]
          Length = 680

 Score =  112 bits (280), Expect = 3e-23
 Identities = 49/71 (69%), Positives = 62/71 (87%)
 Frame = -2

Query: 334 EHLFTLKPHHCGYYILLSNMYAEAERWDEANRVRELMKFRGARKSPGCSWVQIGDQVHAF 155
           EHLF LKP H GYY +LSNMYAEA +WDEAN+VR+LMK RGA+K+PGCSWVQI +QVHAF
Sbjct: 603 EHLFKLKPQHSGYYSVLSNMYAEAGKWDEANQVRKLMKSRGAKKNPGCSWVQIDNQVHAF 662

Query: 154 LVGEKIESLDT 122
           + GE++ ++D+
Sbjct: 663 VAGERMMNVDS 673


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