BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00020572
         (250 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003529311.1| PREDICTED: RNA polymerase II C-terminal doma...   119   3e-25
ref|XP_003542763.1| PREDICTED: RNA polymerase II C-terminal doma...   116   2e-24
ref|XP_003545893.1| PREDICTED: RNA polymerase II C-terminal doma...   106   2e-21
ref|XP_003543063.1| PREDICTED: RNA polymerase II C-terminal doma...   106   2e-21
ref|XP_004134718.1| PREDICTED: RNA polymerase II C-terminal doma...   101   5e-20

>ref|XP_003529311.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           1-like [Glycine max]
          Length = 954

 Score =  119 bits (297), Expect = 3e-25
 Identities = 57/64 (89%), Positives = 60/64 (93%), Gaps = 3/64 (4%)
 Frame = +1

Query: 67  MYKSVVYQGEVVLGEVEIYPEEN---KNFDVKEIRISHFSQPSERCPPLAVLHTVTSCGV 237
           MYKSVVYQGEVV+GEV++YPEEN   KNF VKEIRISHFSQPSERCPPLAVLHTVTSCGV
Sbjct: 1   MYKSVVYQGEVVVGEVDVYPEENNNYKNFHVKEIRISHFSQPSERCPPLAVLHTVTSCGV 60

Query: 238 CFKM 249
           CFKM
Sbjct: 61  CFKM 64


>ref|XP_003542763.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           1-like [Glycine max]
          Length = 960

 Score =  116 bits (291), Expect = 2e-24
 Identities = 57/70 (81%), Positives = 60/70 (85%), Gaps = 9/70 (12%)
 Frame = +1

Query: 67  MYKSVVYQGEVVLGEVEIYPEEN---------KNFDVKEIRISHFSQPSERCPPLAVLHT 219
           MYKSVVYQGEVV+GEV++YPEEN         KNF VKEIRISHFSQPSERCPPLAVLHT
Sbjct: 1   MYKSVVYQGEVVVGEVDVYPEENNNNNNKNYNKNFHVKEIRISHFSQPSERCPPLAVLHT 60

Query: 220 VTSCGVCFKM 249
           VTSCGVCFKM
Sbjct: 61  VTSCGVCFKM 70


>ref|XP_003545893.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           1-like [Glycine max]
          Length = 958

 Score =  106 bits (265), Expect = 2e-21
 Identities = 48/61 (78%), Positives = 55/61 (90%)
 Frame = +1

Query: 67  MYKSVVYQGEVVLGEVEIYPEENKNFDVKEIRISHFSQPSERCPPLAVLHTVTSCGVCFK 246
           M +S+VY GE+ +GEVEIYPEE KN D+KEIRISHFSQPSERCPPLAVLHT+TS G+CFK
Sbjct: 1   MKRSMVYHGEMEVGEVEIYPEEKKNIDLKEIRISHFSQPSERCPPLAVLHTITSFGICFK 60

Query: 247 M 249
           M
Sbjct: 61  M 61


>ref|XP_003543063.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           1-like [Glycine max]
          Length = 960

 Score =  106 bits (265), Expect = 2e-21
 Identities = 48/61 (78%), Positives = 55/61 (90%)
 Frame = +1

Query: 67  MYKSVVYQGEVVLGEVEIYPEENKNFDVKEIRISHFSQPSERCPPLAVLHTVTSCGVCFK 246
           M  S+VY GE+ +GEV+IYPEENKN D+KEIRISHFSQPSERCPPLAVLHT+TS G+CFK
Sbjct: 1   MPTSMVYHGEMAVGEVKIYPEENKNMDLKEIRISHFSQPSERCPPLAVLHTITSFGICFK 60

Query: 247 M 249
           M
Sbjct: 61  M 61


>ref|XP_004134718.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           1-like [Cucumis sativus]
           gi|449479317|ref|XP_004155567.1| PREDICTED: LOW QUALITY
           PROTEIN: RNA polymerase II C-terminal domain
           phosphatase-like 1-like [Cucumis sativus]
          Length = 803

 Score =  101 bits (252), Expect = 5e-20
 Identities = 47/64 (73%), Positives = 55/64 (85%), Gaps = 3/64 (4%)
 Frame = +1

Query: 67  MYKSVVYQGEVVLGEVEIYPEEN---KNFDVKEIRISHFSQPSERCPPLAVLHTVTSCGV 237
           MYKSVVY G+ +LG+VEIYPEE    KN +VKEIRI+HFSQPSERCPPLAVLHT+ + G+
Sbjct: 1   MYKSVVYHGDELLGDVEIYPEEKNGYKNIEVKEIRITHFSQPSERCPPLAVLHTIAASGI 60

Query: 238 CFKM 249
           CFKM
Sbjct: 61  CFKM 64