BLASTX nr result
ID: Glycyrrhiza24_contig00020550
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza24_contig00020550 (687 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003524573.1| PREDICTED: katanin p80 WD40 repeat-containin... 90 5e-16 ref|XP_002513719.1| katanin P80 subunit, putative [Ricinus commu... 89 1e-15 ref|XP_002316424.1| predicted protein [Populus trichocarpa] gi|2... 88 2e-15 ref|XP_002268907.2| PREDICTED: katanin p80 WD40 repeat-containin... 86 5e-15 emb|CBI35338.3| unnamed protein product [Vitis vinifera] 86 5e-15 >ref|XP_003524573.1| PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog 1-like [Glycine max] Length = 200 Score = 89.7 bits (221), Expect = 5e-16 Identities = 45/50 (90%), Positives = 46/50 (92%) Frame = -1 Query: 687 VDIEAEKRLERCNLCFIELEKVKRCLPSFTRRGGSIAKSAQELNLALQDV 538 VDIEAE RLERCNLCF ELEKVKR LPS +RRGGSIAKSAQELNLALQDV Sbjct: 150 VDIEAENRLERCNLCFTELEKVKRFLPSLSRRGGSIAKSAQELNLALQDV 199 >ref|XP_002513719.1| katanin P80 subunit, putative [Ricinus communis] gi|223547170|gb|EEF48666.1| katanin P80 subunit, putative [Ricinus communis] Length = 803 Score = 88.6 bits (218), Expect = 1e-15 Identities = 42/51 (82%), Positives = 46/51 (90%) Frame = -1 Query: 687 VDIEAEKRLERCNLCFIELEKVKRCLPSFTRRGGSIAKSAQELNLALQDVS 535 VDIEAE+RLERCNLCF+ELEKVKRCLP+ RRGGS+AK QELNLALQD S Sbjct: 753 VDIEAEQRLERCNLCFVELEKVKRCLPTLMRRGGSVAKITQELNLALQDDS 803 >ref|XP_002316424.1| predicted protein [Populus trichocarpa] gi|222865464|gb|EEF02595.1| predicted protein [Populus trichocarpa] Length = 728 Score = 87.8 bits (216), Expect = 2e-15 Identities = 41/51 (80%), Positives = 48/51 (94%) Frame = -1 Query: 687 VDIEAEKRLERCNLCFIELEKVKRCLPSFTRRGGSIAKSAQELNLALQDVS 535 VDIEAE+RLERCN+CF+ELEKVKRCL + TR+GGS+AK AQELNLALQ+VS Sbjct: 678 VDIEAEQRLERCNICFVELEKVKRCLLTLTRKGGSVAKYAQELNLALQEVS 728 >ref|XP_002268907.2| PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog 1-like [Vitis vinifera] Length = 800 Score = 86.3 bits (212), Expect = 5e-15 Identities = 40/50 (80%), Positives = 46/50 (92%) Frame = -1 Query: 687 VDIEAEKRLERCNLCFIELEKVKRCLPSFTRRGGSIAKSAQELNLALQDV 538 VDI+AE+RLERCNLCFIELEK+K CLP+ TRRGGS+AK AQELNLAL +V Sbjct: 750 VDIQAEQRLERCNLCFIELEKIKHCLPALTRRGGSVAKLAQELNLALLEV 799 >emb|CBI35338.3| unnamed protein product [Vitis vinifera] Length = 989 Score = 86.3 bits (212), Expect = 5e-15 Identities = 40/50 (80%), Positives = 46/50 (92%) Frame = -1 Query: 687 VDIEAEKRLERCNLCFIELEKVKRCLPSFTRRGGSIAKSAQELNLALQDV 538 VDI+AE+RLERCNLCFIELEK+K CLP+ TRRGGS+AK AQELNLAL +V Sbjct: 939 VDIQAEQRLERCNLCFIELEKIKHCLPALTRRGGSVAKLAQELNLALLEV 988